KEGG   Ursus americanus (American black bear): 123785111
Entry
123785111         CDS       T07931                                 
Symbol
DDB1
Name
(RefSeq) DNA damage-binding protein 1
  KO
K10610  DNA damage-binding protein 1
Organism
uar  Ursus americanus (American black bear)
Pathway
uar03420  Nucleotide excision repair
uar04120  Ubiquitin mediated proteolysis
uar05161  Hepatitis B
uar05170  Human immunodeficiency virus 1 infection
uar05203  Viral carcinogenesis
Brite
KEGG Orthology (KO) [BR:uar00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    123785111 (DDB1)
  09124 Replication and repair
   03420 Nucleotide excision repair
    123785111 (DDB1)
 09160 Human Diseases
  09161 Cancer: overview
   05203 Viral carcinogenesis
    123785111 (DDB1)
  09172 Infectious disease: viral
   05170 Human immunodeficiency virus 1 infection
    123785111 (DDB1)
   05161 Hepatitis B
    123785111 (DDB1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:uar04121]
    123785111 (DDB1)
   03400 DNA repair and recombination proteins [BR:uar03400]
    123785111 (DDB1)
Ubiquitin system [BR:uar04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul4 complex
    Adoptor protein
     123785111 (DDB1)
DNA repair and recombination proteins [BR:uar03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     Cul4-DDB2 complex
      123785111 (DDB1)
    TCR (transcription coupled repair) factors
     Cul4-CSA complex
      123785111 (DDB1)
SSDB
Motif
Pfam: Beta-prop_RSE1_2nd CPSF_A Beta-prop_RSE1_1st Beta-prop_RIG_2nd Beta_propel
Other DBs
NCBI-GeneID: 123785111
NCBI-ProteinID: XP_045642753
LinkDB
Position
Unknown
AA seq 1140 aa
MSYNYVVTAQKPTAVNGCVTGHFTSAEDLNLLIAKNTRLEIYVVTAEGLRPVKEVGMYGK
IAVMELFRPKGESKDLLFILTAKYNACILEYKQSGESIDIITRAHGNVQDRIGRPSETGI
IGIIDPECRMIGLRLYDGLFKVIPLDRDNKELKAFNIRLEELHVIDVKFLYGCQAPTICF
VYQDPQGRHVKTYEVSLREKEFNKGPWKQENVEAEASMVIAVPEPFGGAIIIGQESITYH
NGDKYLAIAPPIIKQSTIVCHNRVDPNGSRYLLGDMEGRLFMLLLEKEEQMDGTVTLKDL
RVELLGETSIAECLTYLDNGVVFVGSRLGDSQLVKLNVDSNEQGSYVVAMETFTNLGPIV
DMCVVDLERQGQGQLVTCSGAFKEGSLRIIRNGIGIHEHASIDLPGIKGLWPLRSDPNRE
TDDTLVLSFVGQTRVLMLNGEEVEETELMGFVDDQQTFFCGNVAHQQLIQITSASVRLVS
QEPKALVSEWKEPQGKNISVASCNSSQVVVAVGRALYYLQIHPQELRQISHTEMEHEVAC
LDITPLGDSNGLSPLCAIGLWTDISARILKLPSFELLHKEMLGGEIIPRSILMTTFESSH
YLLCALGDGALFYFGLNIETGLLSDRKKVTLGTQPTVLRTFRSLSTTNVFACSDRPTVIY
SSNHKLVFSNVNLKEVNYMCPLNSDGYPDSLALANNSTLTIGTIDEIQKLHIRTVPLYES
PRKICYQEVSQCFGVLSSRIEVQDTSGGTTALRPSASTQALSSSVSSSKLFSSSTAPHET
SFGEEVEVHNLLIIDQHTFEVLHAHQFLQNEYALSLVSCKLGKDPNTYFIVGTAMVYPEE
AEPKQGRIVVFQYSDGKLQTVAEKEVKGAVYSMVEFNGKLLASINSTVRLYEWTTEKELR
TECNHYNNIMALYLKTKGDFILVGDLMRSVLLLAYKPMEGNFEEIARDFNPNWMSAVEIL
DDDNFLGAENAFNLFVCQKDSAATTDEERQHLQEVGLFHLGEFVNVFCHGSLVMQNLGET
STPTQGSVLFGTVNGMIGLVTSLSESWYNLLLDMQNRLNKVIKSVGKIEHSFWRSFHTER
KTEPATGFIDGDLIESFLDISRPKMQEVVANLQYDDGSGMKREATADDLIKVVEELTRIH
NT seq 3423 nt   +upstreamnt  +downstreamnt
atgtcgtacaactacgtggtaacggcacagaagcccaccgccgtgaacggctgcgtgacc
ggacactttacttcagctgaagacttgaacctgttgattgccaaaaacacgagattagag
atctatgtggtcactgctgaggggcttcggcccgtcaaagaggtgggcatgtatgggaag
attgcggtcatggagcttttcaggcccaagggggagagcaaggacctgctgtttatcctg
acagctaaatacaatgcctgcatcctggaatataagcagagtggcgagagcattgatatc
ataacgcgagcccatggcaatgtccaggaccggattggccgcccctcagagactggcatt
attggcatcatcgaccctgagtgcaggatgattggcctgcgactctatgatggccttttc
aaggttattccgctagaccgggacaataaagagctcaaggcctttaacatccgcctcgag
gagctgcatgtcatcgatgtcaagttcctatatggttgccaagcacctaccatctgcttt
gtctaccaggaccctcaggggcggcacgtgaaaacctatgaggtgtctctccgagagaag
gagttcaataagggcccttggaaacaggagaatgtagaagctgaagcttccatggtgatt
gcagtcccagagcccttcggaggggccatcatcattggacaggaatcaatcacctatcac
aacggtgacaaatacctggcaattgcccctcctattatcaagcaaagcacgattgtctgt
cacaatcgtgtggaccccaatggttcccgctatctgctgggagacatggaaggacggctc
ttcatgctgcttttggagaaggaggaacagatggacggcactgtcaccctcaaagatctc
cgtgtggagctccttggagagacctctattgctgaatgcttgacatacctcgataacggt
gttgtgttcgttgggtctcgccttggggactctcagcttgtgaagctcaatgttgacagc
aatgaacaaggctcctatgtagtggccatggaaacctttaccaatttaggacccattgtg
gacatgtgcgtggtggacctggagaggcaggggcagggacagctggttacttgctctggg
gcttttaaggaaggttccttgcggatcatccggaacggaattggaatccatgagcatgcc
agcattgacttaccaggcattaaaggtctgtggccgctgcggtctgaccctaaccgggag
actgatgacacgctcgtgctctcttttgtgggccagacaagagttctcatgttaaacgga
gaagaggtggaagaaaccgaactgatgggtttcgtggatgatcagcagaccttcttctgt
ggcaacgtggctcatcagcaactcatccagatcacttcagcatctgtgaggttggtctct
caggaacccaaagccctggtcagcgagtggaaggagcctcagggcaagaacatcagcgtg
gcctcctgcaacagcagccaggtggtggtggcggtggggagggccctctactacctgcag
atccaccctcaggagctccggcagatcagccacacagagatggaacatgaagtggcctgc
ttggacatcaccccactgggggacagcaacgggctgtcccctctttgtgccattggcctc
tggacagacatctcagcgcgtatcctgaagctgccctcttttgagctactgcacaaagag
atgctgggtggagagatcattcctcgttccatcctgatgaccacatttgagagtagccac
tacctcctttgtgccttgggagatggggcgcttttctacttcgggctcaacattgagaca
ggcctgttgagcgaccgtaaaaaggtgactctgggcacccagcccacggtattgaggact
ttccgttctctttctaccaccaacgtctttgcttgctccgaccgccccaccgtcatctac
agcagcaaccacaaattggtcttctccaatgtcaacctcaaggaagtcaactacatgtgt
cccctcaactctgatggctatcctgacagcctggccctggccaacaacagcaccctcacc
atcggcaccatcgacgagatccagaagctgcatatccgcacagttccgctctacgagtct
cccaggaagatctgctatcaggaagtgtcccagtgcttcggggtcctctccagccggatc
gaagtccaggacacgagtggtggcacaacggccctgaggcccagtgccagcacccaggcc
ctgtccagcagcgtcagctctagcaagctgttctccagcagcacggcgccacatgagacc
tcctttggggaagaggtggaggtgcacaatctcctcatcattgaccagcacaccttcgaa
gtgcttcatgcccaccagtttcttcagaatgagtatgccctcagcctggtctcctgcaag
ttgggcaaagaccccaacacgtacttcatcgtgggcacggccatggtgtatcctgaagag
gcggagcccaagcagggtcgaatcgtggtctttcagtattctgacggaaaactacagacc
gtggctgagaaggaagtgaaaggagccgtgtactctatggtggaatttaatgggaagcta
ttagccagcatcaacagcacggtgcggctctatgagtggacaacagaaaaggagctgcgc
accgagtgcaatcactacaacaacatcatggcgctctacctgaagaccaagggcgacttc
atcctggtgggcgacctgatgcgctcagtgctgctgcttgcctacaagcccatggagggg
aactttgaagagatcgctcgagattttaatcccaactggatgagtgctgtggaaatcttg
gatgatgacaatttcctgggggccgaaaatgcctttaacttgtttgtgtgtcagaaggat
agtgccgccaccaccgacgaggagcggcagcacctccaggaggtgggtctcttccacctg
ggcgaattcgtcaacgtcttttgccacggctctctggtcatgcagaatctgggcgagacc
tccacccccacacagggctcggtgctcttcggcacggtcaacggcatgattgggctggtg
acctcgctgtccgagagctggtacaacctcctgttggacatgcagaatcgactcaataaa
gtcatcaagagtgtgggcaagatcgagcactccttctggagatcttttcatactgaacga
aagacagaaccagccacgggcttcatcgatggagacttgattgagagtttcctggacatc
agcaggcccaagatgcaggaggttgtggcaaacctacagtatgatgatggcagcgggatg
aagcgagaggccacggcagacgacctcatcaaggttgtggaggagctgacgcggatccat
tag

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