| Entry |
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| Symbol |
UPF3B
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| Name |
(RefSeq) regulator of nonsense transcripts 3B isoform X1
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| KO |
| K14328 | regulator of nonsense transcripts 3 |
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| Organism |
uar Ursus americanus (American black bear)
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| Pathway |
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| Brite |
KEGG Orthology (KO) [BR:uar00001]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
123785622 (UPF3B)
03015 mRNA surveillance pathway
123785622 (UPF3B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:uar03019]
123785622 (UPF3B)
Messenger RNA biogenesis [BR:uar03019]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
123785622 (UPF3B)
mRNA cycle factors
P-body specific factors
123785622 (UPF3B)
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| SSDB |
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| Motif |
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| Other DBs |
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| LinkDB |
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| Position |
Unknown
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| AA seq |
485 aa
MKEEKEHRPKEKRVTLLTPPGAAGSGAGASGDGTKGEDKQDRNKEKKEALSKVVIRRLPP
TLTKEQLQEHLQPMPEHDYFEFFSNDTSLYPHMYARAYINFKNQEDIILFRDRFDGYVFL
DNKGQEYPAIVEFAPFQKAAKKKTKKRDTKVGTIDDDPEYRKFLESYAADNEKMTSTPET
LLEEIEAKNRELIAKKTTPLLSFLKNKQRMREEKREERRRREIERKRQREEERRKWKEEE
KRKRKDIEKLKKIDRVPERDKLKDEPKIKVHRFLLQAVNQKNLLKKPEKGDEKELDKREK
AKKLDKENLNDERASGQSCTLPKRSDGEPKDEKPKRPEEDSGRDYRERERDYERDQERIL
RERERERLKRQEEERRRQKERYEKEKAFKRKEEELKKEKEAVRDKGKKTESTESVGSSEK
TEKKEEVVKRDRIRNKDRPAMQLYQPGARSRNRLCPPDDSTKSGDSAIEKKQESGISHRK
EGGEE |
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| NT seq |
1458 nt +upstreamnt +downstreamnt
atgaaggaggagaaggagcataggcctaaagagaagcgagtaaccctgttgactcccccg
ggggccgcaggcagcggcgctggggcttcgggggacggcaccaaaggggaagataagcag
gatcgaaataaggagaagaaagaggcgctgagcaaggtggtaattcggagattacctccc
actttgaccaaggagcagcttcaggaacatcttcagcctatgccagagcatgattatttt
gagtttttttctaatgatactagtctgtatcctcatatgtatgccagagcatacatcaac
tttaaaaaccaagaggacattattttgttcagggatcgctttgatggttatgtattcctt
gacaataaaggtcaggaatatcctgctatagtagaatttgcaccttttcaaaaagctgca
aaaaagaagactaagaaaagagataccaaagttgggactatcgatgatgatccagaatat
agaaaatttttggaaagttatgctgcagataatgagaaaatgacatctactccagagaca
ctgctagaggaaatagaagccaaaaatagagaattaatagctaaaaagacaaccccactt
ttgagcttcctgaaaaacaagcagagaatgagagaagaaaaaagagaagaaagaaggagg
cgagaaatagaaaggaaaagacaaagagaagaagagaggagaaagtggaaagaagaagaa
aaacgaaaaaggaaagatatagaaaagctaaagaagatagacagagttccagaaagggac
aaattaaaggatgaaccaaagattaaggtacacaggtttctgttacaagctgtgaatcag
aaaaatctactcaagaagccagaaaaaggagatgaaaaagaattagataaaagagaaaaa
gccaagaaactggacaaagagaatctgaatgatgaaagagccagtgggcagagttgtaca
ctgcccaagcgctctgatggcgaacctaaagatgaaaagcctaagaggcccgaagaggac
agtggcagagactacagggagcgggagcgggactacgagcgagaccaagagcgcatcctg
cgggagagggagagggagaggctgaagcggcaggaagaggagcgccgcaggcagaaggag
cgctacgagaaggagaaggcttttaaaagaaaggaagaagaattgaaaaaagagaaagaa
gcagttcgggataaaggaaagaagactgaaagtacagaatcagtaggcagctcagaaaaa
actgaaaagaaagaggaagtggttaagagagatcgcataagaaacaaggatcgcccagca
atgcagctttaccaaccaggagctcgaagccgaaatcgactctgtccacctgatgacagc
accaagtctggagattcggcaatagaaaaaaagcaggaaagtggtattagccatagaaaa
gaaggaggagaggagtga |
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