Ursus americanus (American black bear): 123785910
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Entry
123785910 CDS
T07931
Symbol
MSH2
Name
(RefSeq) DNA mismatch repair protein Msh2 isoform X1
KO
K08735
DNA mismatch repair protein MSH2
Organism
uar
Ursus americanus (American black bear)
Pathway
uar01524
Platinum drug resistance
uar03430
Mismatch repair
uar05200
Pathways in cancer
uar05210
Colorectal cancer
Brite
KEGG Orthology (KO) [BR:
uar00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
123785910 (MSH2)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
123785910 (MSH2)
09162 Cancer: specific types
05210 Colorectal cancer
123785910 (MSH2)
09176 Drug resistance: antineoplastic
01524 Platinum drug resistance
123785910 (MSH2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
uar03400
]
123785910 (MSH2)
DNA repair and recombination proteins [BR:
uar03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
123785910 (MSH2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_IV
MutS_I
MutS_II
AAA_27
Motif
Other DBs
NCBI-GeneID:
123785910
NCBI-ProteinID:
XP_045643895
LinkDB
All DBs
Position
Unknown
AA seq
945 aa
AA seq
DB search
MAVQPKDTLQLESAAEVGFVRFFQAMPEKPTTTVRLFDRGDFYTAHHEDALLAAREVFKT
QGVVKYIGPAGTKTLESVVLSKMNFESFVKDLLLVRQYRVEVYKNRAGSKASKENDWYLA
FKASPGNLSQFEDILFGNNDMSASIGVVGVKMSTVDGQRQVGVGYVDSIQRKLGLCEFPD
NDQFSNLEALLIQIGPKECVLPGGETAGDMGKLRQVIQRGGILITERKRADFFTKDIYQD
LNRLLKGKKGEPVNSAVLPEMENQVAASSLSAVIKFLELLSDDSNFGQFELTTFDFSQYM
KLDIAAVRALNLFQGSVEDTTGSQSLAALLNKCKTPQGQRLVNQWIKQPLMDKNRIEERL
NLVEAFVEDAELRQSLQEDLLRRFPDLNRLAKKFQRQAANLQDCYRLYQGINQLPNVIRA
LEKYEGKHQSLLLAVFVTPLIDLRSDFSKFQEMIETTLDMDQVENHEFLVKPSFDPNLSE
LREIMDDLEKKMQSTLVSAARDLGLDPGKQIKLDSSAQFGYYFRVTCKEEKVLRNNKNFS
TVDIQKNGVKFTNSKLTSLNEEYTKNKTEYEEAQDAIVKEIVNISSGYVEPMQTLNDVLA
QLDAVVSFAHVSNAAPVPYVRPVILEKGQGRITLKASRHACVEVQDEVAFIPNDVHFEKD
KQMFHIITGPNMGGKSTYIRQTGVIVLMAQIGCFVPCESAEVSIVDCILARVGAGDSQLK
GVSTFMAEMLETASILRSATKDSLIIIDELGRGTSTYDGFGLAWAISEYIATKIGAFCMF
ATHFHELTALANQIPTVNNLHVTALTTEETLTMLYQVKKGVCDQSFGIHVAELANFPRHV
IECARQKALELEEFQYIGESQGYDDMEPAAKRCYLEREQGEKIIQEFLSKVKQVPFTEMS
EENITMKLKQLKAEKCPHTSFIQLCGKFSSGTNNMGCWAAFTGPS
NT seq
2838 nt
NT seq
+upstream
nt +downstream
nt
atggcggtgcagccgaaggatacgctgcagctggagagcgcggccgaggtcggcttcgtg
cgcttcttccaggccatgccggagaagccgaccactacggtgcgcctcttcgaccggggc
gacttctacacggcgcaccacgaggacgcgctgctggctgcccgagaagtgttcaagacg
cagggggtagtcaagtacatagggccggcaggaacaaagactctggagagtgttgtgctt
agtaaaatgaattttgagtcttttgtaaaagatctgcttctagttcgacagtatagagtt
gaagtttataagaatagagctggaagtaaggcctcaaaggagaatgattggtatttggca
tttaaggcttctccaggtaatctttctcagtttgaagacattctgtttggtaacaatgat
atgtcagcttccattggtgtcgtgggtgttaaaatgtctacagttgatggccaaagacag
gtcggagttgggtatgttgactccatacagaggaagctaggactttgtgagttcccggat
aatgatcagttctccaatttggaggctctcctgatacagattggaccaaaggaatgtgtt
ttaccaggaggagagactgctggagacatgggaaaactgaggcaggttattcagagagga
ggaattctgatcacagaaagaaaaagagctgacttttttacaaaagatatttatcaggac
ctcaaccggttgttgaaaggcaaaaagggagagccagtgaatagtgctgtcttgccagaa
atggagaatcaggttgcagcttcatcactgtctgcagtaatcaagtttttagaactctta
tcagatgattcaaattttggacagtttgaactgactacttttgacttcagtcagtacatg
aaattggatattgcagcagtcagagcccttaaccttttccagggttctgttgaagatact
actggctctcagtctctggctgcattgctgaataaatgcaaaacccctcaaggacaaaga
ctggttaaccagtggattaagcagcctctcatggataagaacagaatagaagagagactg
aatttagtggaagcttttgtagaagatgcagaattgaggcagagtttacaagaagatttg
cttcgtcgattcccagatcttaaccgacttgccaagaaatttcagagacaagcagcaaat
ttacaagattgttatcgactctatcagggtataaatcaactccctaatgttattcgggct
ctggaaaagtatgaaggaaaacaccagagtttattgttggcagtttttgtcactcctctt
attgatcttcgttctgatttctccaaatttcaggaaatgatagaaacaactttagatatg
gatcaggtggaaaaccatgaattccttgtaaaaccttcatttgatcccaatctgagtgaa
ttaagagaaataatggatgacttggaaaagaagatgcagtcaacattagtaagtgcagca
agagatctaggtttggatcctggcaaacagattaaactggattccagtgcacagtttggt
tattactttcgcgtaacatgtaaggaagaaaaagtccttcgtaacaataaaaacttcagt
acggtggacattcagaagaatggtgttaaatttaccaacagtaaactgacttctctcaat
gaagagtataccaaaaataaaaccgagtacgaggaagcccaggatgccattgttaaagaa
attgtcaatatttcttcaggctacgtagaaccgatgcagacgctcaatgacgtgttagct
cagctagatgctgttgtcagctttgcccacgtgtcaaatgcagcacctgttccgtatgtg
cgaccggtcattttggagaaaggacaaggaagaattacattgaaagcatccagacacgct
tgtgttgaagttcaagatgaagttgcatttattcctaatgatgttcacttcgaaaaagat
aaacagatgttccacatcattactggccccaatatgggaggtaaatccacatatattcgc
caaactggggtgatagttctcatggcccagattgggtgttttgtgccgtgtgagtcagcg
gaagtgtccattgtggactgcatcttggcccgcgtaggggctggtgacagtcagttgaaa
ggagtctccacattcatggctgaaatgctagaaactgcttctattctcaggtctgcaacc
aaagattctttaataatcatagatgagttgggaagaggaacctctacctatgatggattt
gggttagcgtgggctatatcagagtacattgcaacaaagattggtgctttttgcatgttt
gcaacacattttcatgaacttactgccttggccaatcagataccaactgttaataatcta
catgtcacagcactaactactgaagagaccttaactatgctttatcaggtgaagaaaggt
gtctgtgatcagagtttcgggattcatgtcgcagagcttgctaatttccctaggcatgtt
atagagtgtgcgagacaaaaagctctggagctagaggagtttcaatatattggagaatca
caaggatatgatgacatggaaccagccgcaaagaggtgctatctggaaagagagcaaggt
gaaaaaattattcaggagtttttatccaaggtgaagcaagtgccttttactgaaatgtca
gaagaaaacatcacaatgaagttaaaacagctgaaagctgagaaatgcccacacacatct
ttcatccagctctgtgggaaattcagcagtggcacgaacaatatgggatgttgggcagcc
ttcactggaccatcctga
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