Ursus americanus (American black bear): 123787249
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Entry
123787249 CDS
T07931
Symbol
PAN2
Name
(RefSeq) PAN2-PAN3 deadenylation complex catalytic subunit PAN2 isoform X1
KO
K12571
PAB-dependent poly(A)-specific ribonuclease subunit 2 [EC:
3.1.13.4
]
Organism
uar
Ursus americanus (American black bear)
Pathway
uar03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
uar00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
123787249 (PAN2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
uar03019
]
123787249 (PAN2)
Enzymes [BR:
uar01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.4 poly(A)-specific ribonuclease
123787249 (PAN2)
Messenger RNA biogenesis [BR:
uar03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
123787249 (PAN2)
mRNA degradation factors
3'-5' decay
Pan complex
123787249 (PAN2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PAN2_N
UCH_1
RNase_T
UCH
WD40_like
WD40_CDC20-Fz
Beta-prop_THOC3
Motif
Other DBs
NCBI-GeneID:
123787249
NCBI-ProteinID:
XP_045645815
LinkDB
All DBs
Position
Unknown
AA seq
1211 aa
AA seq
DB search
MNFEGLDPGLAEYAPAMHSALDPVLDAHLNPSLLQNVELDPEGVALEALPVQESVHIMEG
VYSELHSVVAEVGVPVSVSHFDLHEEMLWVGSHGGHATSFFGPALERYSSFQVNGSDDIR
QIQSLENGILFLTKNNLKYMARGGLIIFDYLLEESEDMHSLLLTDSSTLLVGGLQNHILE
IDLNTVQETQKYAVETPGVTIMRQTNRFFFCGHTSGKVSLRDLRTFKVEHEFDAFSGSLS
DFDVHGNLLAACGFSSRLTGLACDRFLKVYDLRMMRAITPLQVHVDPAFLRFIPTYTSRL
AIISQSGQCQFCEPTGLANPADIFHVNPVGPLLMTFDVSASKQALAFGDSEGCVHLWTDS
PEPSFNPYSRETEFALPCLVDSLPPLDWSQDLLPLSLIPVPLTTDTLLSDWPAANSAPAP
RRAPPVDAEILRTMKKVGFIGYAPNPRTRLRNQIPYRLKESDSEFDSFSQVTESPIGREE
EPHLHMVSKKYRKVTIKYSKLGLEDFDFKHYNKTLFAGLEPHIPNAYCNCMIQVLYFLEP
VRCLIQNHLCQKEFCLACELGFLFHMLDLSRGDPCQGSNFLRAFRTIPEASALGLILADS
DEASGKGNLARLIQRWNRFILTQLHQDMQELEVPQAYRGAGGSSFCSSGDSVIGQLFSCE
MENCSLCRCGSETVRASSTLLFTLSYPEGSTSDKTGKSCDFAQVLKRSICLEQNTQAWCD
NCEKYQPTIQTRNIRHLPDILVINCEVNSLKEADFWRMQAEVAFKMAIKKHGGEISKNKE
FALADWKELGSPEGMLMCSSIEELKNVWLPFSIRMKMTKNKGLDVCNWTDGDEIQLSSLG
TPSQWGPARAEEEHGVYVYDLMATVVHILDSRTGGSLVAHIKVGETYHQRKEGVTHQQWY
LFNDFLIEPIDKHEAVQFDMNWKVPAILYYVKRNLNSKYNLNIKNPIEASVLLAEASLAR
KQRKTHTTFIPLMLNEMPQVGDLVGLDAEFVTLNEEEAELRSDGTKSTIKPSQMSVARIT
CVRGQGPNEGIPFIDDYISTQEQVVDYLTQYSGIKPGDLDAKISSKHLTTLKSTYLKLRF
LIDIGVKFVGHGLQKDFRVINLMVPKDQVLDTVYLFHMPRKRMISLRFLAWYFLDLKIQG
ETHDSIEDARTALQLYRKYLELSKNGTEPESFHKVLKGLYEKGRKMDWKVPEPEGQTSPK
NAAVFSSVLAL
NT seq
3636 nt
NT seq
+upstream
nt +downstream
nt
atgaacttcgagggtctggaccctggactggcagagtatgccccagccatgcattctgcc
ctggaccctgtcctggacgcccacctgaacccaagtctgctacagaatgtggagctggat
ccggagggggtggccttggaggctcttcctgtccaggagtcagtgcacataatggaaggt
gtctactctgaattgcacagtgtggtggctgaagtgggtgtgcctgtctccgtctcccac
tttgacttgcacgaggagatgctgtgggtgggaagccacgggggccatgctacttcgttt
ttcggcccagccttggagcgttactcatcctttcaggtcaatggcagtgatgacatacga
cagatccagagcctggaaaatggtatcctttttctcaccaagaacaacctcaagtatatg
gcccgtgggggcctcattatatttgattacctgctagaggaaagtgaggatatgcacagt
ctcctgctgacggacagcagcactctgcttgttggtgggctgcagaaccacatattggag
attgaccttaacactgtccaggagactcagaagtatgccgtcgaaacgcctggagtcact
attatgaggcagacaaatcgcttcttcttctgtggccacacgtctggcaaggtttccctg
cgagacctccgtacttttaaggtggagcatgagtttgatgctttctcggggagtctgtcg
gattttgatgtgcatggcaacctgctggccgcctgtggcttctccagccgcctcaccggc
ctggcctgtgaccgtttcctcaaggtgtatgacctgcgcatgatgcgtgccatcaccccg
ctccaagtacacgtggatcccgccttcttgcgcttcatccctacgtacacctctcgactt
gctatcatctcccagtcagggcagtgccagttttgtgagcccacaggcctggccaaccca
gcagacatctttcatgtgaatcctgtagggcctctgctaatgacatttgacgtatcagcc
agcaagcaggccctggccttcggggattctgagggctgtgtgcacctctggactgattcc
cctgagccttccttcaacccttactcccgtgagaccgagtttgctttgccctgtctcgtg
gactcactgcctcctctggactggagtcaggacctgctgcctctttccctcatccctgtc
ccgctcaccactgacacacttctctctgattggcctgcggccaactccgctccagctccc
aggcgcgcaccccctgtggatgcagagattcttcgcaccatgaagaaggtgggcttcatt
ggctatgcgcccaacccccgcacccggttgcgcaatcagattccttaccgactcaaggag
tctgacagtgaatttgacagcttcagccaggtcactgagtcaccaatagggcgggaagag
gagccacatctccacatggtttctaagaagtaccgcaaggtaaccatcaaatattccaag
ctagggctggaggactttgacttcaaacactacaataagaccctgtttgctggattagag
ccccacatccccaatgcctactgtaactgcatgatccaggtgctctacttcctggagcct
gttcgctgtctaatccagaaccatctttgccagaaggagttctgcctggcgtgtgagctg
ggcttcctcttccacatgttggatctctctcgaggtgacccttgtcagggcagtaatttt
cttcgggcattccgcaccatccctgaggcgtcagcccttggtctgatcctggctgactca
gatgaggcttcaggcaaaggcaatctggccaggcttattcagaggtggaatcgcttcatt
ctcactcagctgcatcaggacatgcaggagctggaagtaccccaggcttatcgaggtgct
ggaggcagcagcttttgctcatcgggggactcggtcatcgggcagctgttcagctgtgag
atggagaactgcagcctctgccgctgtggcagtgagaccgtgcgagcctcatccaccctg
ctcttcacgctctcctaccccgagggtagcaccagtgataaaaccgggaagagctgtgac
tttgctcaggtcctaaagcgaagcatctgcctggagcagaatacacaggcctggtgtgac
aactgtgaaaagtaccagcccacgattcagacccgcaacatccgccatctgccagatatt
ctcgtcatcaactgtgaggtgaacagcttgaaagaagctgatttctggagaatgcaggct
gaggttgccttcaaaatggcaataaagaagcatggtggagaaatctccaagaacaaggag
tttgctttggctgattggaaagaactaggaagtccagagggcatgctcatgtgttcctcc
attgaggagttgaagaatgtctggcttcctttctccattcgcatgaagatgaccaagaac
aaagggctggatgtttgcaattggactgatggggatgagatacagcttagcagcctgggt
accccctcacagtggggcccagccagggcagaggaggagcatggtgtctatgtgtatgac
ctgatggctactgtggtgcacatcctggactcacgcacagggggcagcctggtggctcac
atcaaagttggagagacctaccaccagcgtaaggagggtgttacccaccagcagtggtat
ctcttcaatgactttcttattgaacctattgataagcacgaagctgtgcagtttgacatg
aattggaaagtacctgctatcctttattacgtcaaaaggaatcttaattccaaatacaac
ctgaacatcaagaaccctattgaggcaagtgtcctgctggctgaagcctcactagcacgg
aagcagcggaaaacacatactacctttattccactgatgctgaatgagatgccacaggtt
ggggacctggtgggcctggatgctgagtttgtcacccttaatgaggaggaagcagagtta
cgcagtgatggcaccaagtctaccatcaaaccaagccagatgtcagtagcgaggatcacc
tgtgttcggggccagggacccaatgagggtattcccttcattgatgactacatctctacc
caggagcaggtggtggattacttgactcagtactcggggataaagccaggagacctagat
gcgaagatttcctctaagcacctcacaactctcaagtctacctacttaaagcttcgtttt
cttattgacattggagtcaagtttgtgggtcatggtctgcagaaggacttccgggtcatc
aacctcatggtgcccaaggaccaagtccttgacactgtctatctctttcacatgccccga
aaacgaatgatttccctgcgattccttgcttggtactttctagacttgaagattcaaggg
gaaacccatgacagtattgaggatgcccgcacagctcttcagctctaccgaaaatatctg
gagctaagcaaaaatggcaccgagcctgagtccttccacaaagtgctcaagggtctttac
gagaagggtcgaaagatggactggaaggtgcctgaacctgagggccagacaagccccaag
aatgcagctgtcttctcctcagtgttggcgctctga
DBGET
integrated database retrieval system
