Ursus americanus (American black bear): 123787257
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Entry
123787257 CDS
T07931
Symbol
SMARCC2
Name
(RefSeq) SWI/SNF complex subunit SMARCC2 isoform X1
KO
K11649
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
Organism
uar
Ursus americanus (American black bear)
Pathway
uar03082
ATP-dependent chromatin remodeling
uar04714
Thermogenesis
uar05225
Hepatocellular carcinoma
Brite
KEGG Orthology (KO) [BR:
uar00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
123787257 (SMARCC2)
09150 Organismal Systems
09159 Environmental adaptation
04714 Thermogenesis
123787257 (SMARCC2)
09160 Human Diseases
09162 Cancer: specific types
05225 Hepatocellular carcinoma
123787257 (SMARCC2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
uar03021
]
123787257 (SMARCC2)
03036 Chromosome and associated proteins [BR:
uar03036
]
123787257 (SMARCC2)
Transcription machinery [BR:
uar03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
123787257 (SMARCC2)
Chromosome and associated proteins [BR:
uar03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
123787257 (SMARCC2)
PBAF complex
123787257 (SMARCC2)
GBAF(ncBAF) complex
123787257 (SMARCC2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SWIRM-assoc_2
SWIRM-assoc_3
SWIRM-assoc_1
SWIRM
Myb_DNA-binding
Myb_DNA-bind_6
Chromo
Motif
Other DBs
NCBI-GeneID:
123787257
NCBI-ProteinID:
XP_045645843
LinkDB
All DBs
Position
Unknown
AA seq
1245 aa
AA seq
DB search
MAVRKKDGGPNVKYYEAADTVTQFDNVRLWLGKNYKKYIQAEPPTNKSLSSLVVQLLQFQ
EEVFGKHVSNAPLTKLPIKCFLDFKAGGSLCHILAAAYKFKSDQGWRRYDFQNPSRMDRN
VEMFMTIEKSLVQNNCLSRPNIFLCPEIEPKLLGKLKDIIKRHQGTVTEDKNNASHVVYP
VPGNLEEEEWVRPVMKRDKQVLLHWGYYPDSYDTWIPASEVEASVEDAPTPEKPRKVHAK
WILDTDTFNEWMNEEDYEVNDDKSPVSRRKKISAKTLTDEVNSPDSDRRDKKGGNYKKRK
RSPSPSPTPEAKKKNAKKGPSTPYTKSKRGHREEEQEDLTKDMDEPSPVPNVEEVTLPKT
VNTKKDSESAPVKGGTMTDLDEQEDESMETTGKDEDENSTGNKGEQTKNPDLHEDNVTEQ
THHIIIPSYAAWFDYNSVHAIERRALPEFFNGKNKSKTPEIYLAYRNFMIDTYRLNPQEY
LTSTACRRNLAGDVCAIMRVHAFLEQWGLINYQVDAESRPTPMGPPPTSHFHVLADTPSG
LVPLQPKTPQGRQVDADTKAGRKGKELDDLVPETAKGKPELQTSASQQMLNFPDKGKEKP
TDMQNFGLRTDMYTKKNVPSKSKAAASATREWTEQETLLLLEALEMYKDDWNKVSEHVGS
RTQDECILHFLRLPIEDPYLEDSEASLGPLAYQPIPFSQSGNPVMSTVAFLASVVDPRVA
SAAAKSALEEFSKMKEEVPTALVEAHVRKVEEAAKVTGKADPAFGLESSGIAGTTSDEPE
RIEESGTDEARAEGQAAEEKKEPKEPREGVGAAEEETKEKTSEVPKKDEERGKQGDSEKE
SEKSDGDPIVDPDKEKEPKEGQEEVLKDVVESEGERKTKVERDIGEGNLSTAAAAALAAA
AVKAKHLAAVEERKIKSLVALLVETQMKKLEIKLRHFEELETIMDREREALEYQRQQLLA
DRQAFHMEQLKYAEMRARQQHFQQMHQQQQQPPPALPPGSQPVPPAGSAGPPTVHSLAMA
PASVAPAPAGGGAPPGSLGPSEQIGQAGSAAGPPQQQPAGAPQPGAVPPGVPPPGPHGPS
PFPNQQTPPAMMPGAVPGSGHPGVAGNAPLGLPFGMPPPPPPPAPSIIPFGSLADSISIN
LPPPPNLHGHHHHLPFAPGTLPPPNLPVSMANPLHPNLPATTTMPSSLPLGPGLGSAAAQ
SPAIVAAVQGNLLPSASPLPDPGTPLPPDPTAPSPGTVTPVPPPQ
NT seq
3738 nt
NT seq
+upstream
nt +downstream
nt
atggcggtgcggaagaaggacggcggccccaacgtgaagtactacgaggccgcggacacc
gtgacccagttcgacaacgtgaggctctggctcggcaagaactacaagaagtatatacaa
gctgaaccacctaccaacaagtccttgtctagcctggttgtacagttgctacaatttcag
gaagaagtttttggcaaacatgtcagcaacgcaccgctcactaaactgccgatcaaatgt
ttcctagatttcaaagcaggaggctccctgtgccacatacttgcagctgcctacaaattc
aagagtgaccagggatggcggcgttacgatttccagaatccatcacgcatggaccgcaac
gtggaaatgttcatgaccattgagaagtccttggtgcagaataactgcctgtctcgacct
aacatttttctgtgcccagaaattgaacccaaactgctagggaaattaaaggacattatc
aagagacaccagggaacagtcactgaagataagaacaatgcctcccatgttgtgtatcct
gtcccagggaacctggaagaagaggaatgggtacgaccagtcatgaagcgggataagcag
gttcttctgcactggggctactatcctgacagttacgacacgtggatcccggccagtgaa
gttgaagcgtctgtggaggatgctccaacccctgagaaacctcggaaggttcatgcaaag
tggattctggacacagacacgttcaatgaatggatgaacgaggaagactacgaggtaaat
gatgacaaaagccccgtctcccgccgaaagaagatttcagccaagacgctgacagacgag
gtgaacagcccagattcagaccgacgggacaagaaaggggggaactataagaagaggaag
cgctccccctctccttcaccaaccccagaagctaagaagaaaaatgctaagaaaggtccc
tcgacaccttacaccaagtcgaagcgtggacacagagaggaggagcaagaagatctgaca
aaggacatggatgagccttcaccagtccccaacgtagaggaggtgacgttgcctaaaaca
gtcaacactaagaaggattcagagtcagccccagtcaaaggaggcaccatgactgacctg
gatgaacaggaggatgaaagcatggagaccacgggcaaggatgaggatgaaaacagtacg
gggaacaagggggagcagacgaagaatccggacctacatgaggacaacgtgactgaacag
acccaccacatcatcattcccagctacgccgcctggtttgactataatagtgttcatgcc
attgagcggagggctctccccgagttctttaacggcaagaacaagtccaagactccagaa
atctacctggcttatcgaaacttcatgattgacacataccggctgaacccccaagagtat
ctcacctccactgcctgccgcaggaacctggccggtgatgtctgtgccatcatgagggtc
catgccttcctagagcagtggggtcttattaactaccaggtggatgctgagagtcgacca
accccgatggggcctccgcccacctctcacttccatgtcttggcagacacgccatcaggg
ctggtgcctctgcagcctaagaccccgcagggccgccaggttgatgctgataccaaggct
gggcgaaagggcaaagagctggatgacctggtgccagagacggctaagggcaagccagag
ctgcagacctctgcttcccagcaaatgctcaacttccctgacaaaggcaaagagaagccg
acagacatgcagaactttgggctgcgcacagacatgtacacaaagaagaacgtgccctcc
aagagtaaagctgcggccagtgccactcgagagtggacggaacaggagaccctgctgctc
ctggaggcactggaaatgtacaaagatgactggaacaaagtgtcagagcacgtgggaagc
cgcacgcaggatgagtgcatcttgcattttcttcgtcttcccattgaagacccgtacctg
gaggactcagaggcctccctgggccccctggcctaccaacctatccccttcagtcagtca
ggcaaccctgttatgagcactgttgccttcctggcctctgtcgtcgatcctcgagtcgcc
tctgctgctgcgaagtcggccctagaagagttctccaaaatgaaggaagaagtgcccaca
gccttggtggaggcccacgttcggaaagtggaggaggccgccaaagtgacgggcaaggcc
gacccagcctttggtctggagagcagcggtatcgcgggaaccacgtctgacgagcccgag
aggatcgaggagagcgggacagacgaggcgcgggcggagggccaggctgcggaggagaag
aaggagcccaaggaaccccgagaaggagttggggctgccgaagaagaaacaaaggagaag
accagcgaggtccccaagaaggacgaagagagagggaaacaaggtgacagcgagaaggag
tcagagaagagcgacggggaccccatagttgacccggacaaggagaaggagccaaaggaa
gggcaagaggaagtgctgaaggacgtggtggagtcggagggggagaggaagacgaaggtg
gagcgcgacattggtgagggcaatctctccaccgccgccgctgccgccctggccgctgcc
gccgtgaaggccaagcacctggccgccgtggaggagaggaagatcaaatcgctggtggcc
ctgctggtggagacccagatgaagaagctggagatcaaactccgacactttgaagagttg
gagacgatcatggaccgggagcgagaggcactggagtatcagaggcagcagctcctggcc
gacagacaagccttccacatggagcagctgaagtatgcggagatgagggcccggcagcag
cacttccagcaaatgcaccaacagcagcagcagcctccgccagccctgcccccaggctcc
cagcccgtcccacctgcgggctccgctgggccgcccacggttcacagcctggctatggct
ccggcctctgtggcccctgcccctgctggcggtggggctccccctggaagcttgggcccc
tctgaacagattgggcaggcagggtcagccgcggggccgccgcagcagcagccagctgga
gcgccccagcctggggcagtcccaccaggggtacccccccctggaccccatggcccctca
ccgttccccaaccaacaaactcctcccgcaatgatgccaggggcagtgccaggcagcggg
cacccaggcgtggcgggtaatgctcctttgggtttgccttttggcatgccgcctcctcct
cctcctcccgctccatccatcatcccattcggtagtctagccgactccatcagtattaac
ctgccccctcctcctaacctgcatgggcatcaccaccatctcccgtttgccccgggcact
ctccccccacctaacctgcctgtgtccatggcgaaccctctccatcctaacctgccggcg
accaccaccatgccatcttccttgcctctcgggccggggctcggatccgccgcagcccag
agccctgccattgtggcagctgttcagggcaacctcctgcccagtgccagcccactgcca
gacccaggtacccccctgcctccagaccccacggccccgagcccaggcacagttacccct
gtgccacctccacagtga
DBGET
integrated database retrieval system
