Ursus americanus (American black bear): 123788148
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Entry
123788148 CDS
T07931
Symbol
THOC5
Name
(RefSeq) THO complex subunit 5 homolog isoform X1
KO
K13174
THO complex subunit 5
Organism
uar
Ursus americanus (American black bear)
Pathway
uar03013
Nucleocytoplasmic transport
uar03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
uar00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
123788148 (THOC5)
09122 Translation
03013 Nucleocytoplasmic transport
123788148 (THOC5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
uar03019
]
123788148 (THOC5)
03041 Spliceosome [BR:
uar03041
]
123788148 (THOC5)
Messenger RNA biogenesis [BR:
uar03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
123788148 (THOC5)
Spliceosome [BR:
uar03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
123788148 (THOC5)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FmiP_Thoc5
Motif
Other DBs
NCBI-GeneID:
123788148
NCBI-ProteinID:
XP_045647243
LinkDB
All DBs
Position
Unknown
AA seq
694 aa
AA seq
DB search
MSSESSKKRKPKVIRSDGAPAEGKRNRSDTEQEGKYYSEEAEVDLRDPGRDYELYKYTCQ
ELQRLMAEIQDLKSRGGKDVAVEIEDRRIQSCVHFMTLKKLNRLAHIRLKKGRDQTHEAK
QKVDAYHLQLQNLLYEVMHLQKEITKCLEFKSKHEEIDLVSLEEFYKEAPPDISKAEVTM
GDPHQQTLARLDWELEQRKRLAEKYRECLSNKEKILKEIEVKKEYLSSLQPRLNSIMQAS
LPVQEYLFMPFDQAHKQYETARHLPPPLYVLFVQATAYGQACAHMKSSQPPRQDKTLSVA
IEGSVDEAKALFKPPEDSQDDESDSDAEEEQTTKRRRPTLGVQLDDKRKEMLKRHPLSVM
LDLKCKDDSVLHLTFYYLMNLNIMTVKAKVTTATELITPISAGDLLSPDSVLSCLYPGDH
GKKTPNPANQYQFDKVGILTLRDYVLDLGHPYLWVQKLGGLHFPKEQPQHTVIADHSLSA
SHMETTMKLLKTRVQSRLALHKQFASLEHGIVPVTSDCQYLFPAKVVSRLVKWVTIAHED
YLELHFTKDIVEAGLAEDTNLYYMALVERGTAKLQAAVVLNPGYSSIPPIFQLCLNWKGE
KTNSNDDNIRAMESEVNVCYKELCGPRPSHQLLTNQLQRLCVLLDVYLETDSHDDSVEGP
KEFPQEKMCLRLFRGPSRMKPFKYNHPQGFFSHR
NT seq
2085 nt
NT seq
+upstream
nt +downstream
nt
atgtcatcagaatcgagcaaaaaacggaagcccaaagtgatccgaagtgatggcgctcca
gctgaagggaagcgtaaccgttctgacacagagcaggaaggtaaatactacagtgaggaa
gctgaagtggaccttcgggaccctggcagagactatgagctgtacaagtacacatgccag
gagttgcagaggctcatggctgagatccaggacctgaagagcagaggaggcaaggatgtg
gcagttgagatagaagatcgaaggatccagagctgtgttcatttcatgactctaaagaag
cttaaccgattagcccacatcaggttgaagaaaggaagagatcagacccatgaggccaag
cagaaagtagatgcctatcacctgcagctccagaacctgttgtatgaggtgatgcacctg
cagaaagagatcaccaaatgtctggagtttaagtcgaagcatgaagaaattgatctggtc
agtttagaggagttttataaggaggctcctccagatattagtaaggctgaagtcaccatg
ggagaccctcaccagcaaacccttgcacgtctggactgggagctggaacagcggaaaagg
ctggcagagaagtaccgagagtgcctctccaacaaggagaagatccttaaggagattgag
gtgaagaaggagtacctaagcagtctccagcctcgcctaaatagcatcatgcaggcttcc
ctccccgtgcaagagtacctgttcatgccattcgaccaggctcacaagcagtatgagaca
gctagacacctgccacctcccctttatgtcctctttgtccaagccactgcatatgggcag
gcttgtgctcatatgaaatcctcccagccccctagacaggataagacgttgtctgtggca
attgaaggcagcgtggatgaagccaaggctctgtttaagcctcctgaagactcccaagat
gacgagagcgactcagatgctgaggaggagcagaccacgaaacgccgacgacccacactg
ggagttcagttggatgacaagcgcaaggagatgctgaagaggcacccgctgtctgtcatg
ctggacctgaagtgcaaagatgacagtgtgcttcacctgactttctactacctcatgaac
ctcaacatcatgacagtaaaagccaaagtgacgaccgccacggagctgatcacccccatc
agtgcaggtgacttgctgtctcctgactcggtcctgagctgtttgtatccaggggatcat
ggaaagaaaactccaaatccagccaatcagtatcagtttgataaagttggcatcctgact
ttgagagactatgtacttgacctgggtcacccctatttgtgggtacagaagctgggtggc
ctccacttccccaaagagcagccccagcacacggtgattgccgaccactcgctgagcgcc
agccacatggagaccaccatgaaactgctgaagaccagggtacagtcccgcctggccctc
cacaaacagtttgcatccctggaacatggcattgtaccagttaccagtgattgccagtac
ctcttccctgcaaaggttgtctcccgccttgtgaagtgggtgaccattgcccatgaggat
tacctggagctgcatttcaccaaggacattgtggaggcaggactggctgaggacaccaat
ctctactacatggcactcgtggaaaggggcacagctaaactccaggctgctgtggtgctg
aaccctggctactcctccatcccacccattttccaactttgtctgaactggaaaggggag
aaaaccaatagcaacgatgacaacattcgggccatggagagcgaggtcaacgtgtgctac
aaggagctgtgcggcccccggcccagccatcagctcttgaccaaccagctgcagcgcctg
tgtgtgctcctggatgtctacctggagactgacagccacgatgacagtgtggaggggccc
aaggagtttccccaggagaagatgtgtctgcggcttttcaggggtcccagcaggatgaag
ccatttaaatataaccatcctcaaggattcttcagccatcgctga
DBGET
integrated database retrieval system
