Ursus americanus (American black bear): 123788447
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Entry
123788447 CDS
T07931
Symbol
TRPC1
Name
(RefSeq) short transient receptor potential channel 1 isoform X1
KO
K04964
transient receptor potential cation channel subfamily C member 1
Organism
uar
Ursus americanus (American black bear)
Pathway
uar04360
Axon guidance
uar04724
Glutamatergic synapse
uar04726
Serotonergic synapse
uar04929
GnRH secretion
uar04972
Pancreatic secretion
Brite
KEGG Orthology (KO) [BR:
uar00001
]
09150 Organismal Systems
09152 Endocrine system
04929 GnRH secretion
123788447 (TRPC1)
09154 Digestive system
04972 Pancreatic secretion
123788447 (TRPC1)
09156 Nervous system
04724 Glutamatergic synapse
123788447 (TRPC1)
04726 Serotonergic synapse
123788447 (TRPC1)
09158 Development and regeneration
04360 Axon guidance
123788447 (TRPC1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
uar04040
]
123788447 (TRPC1)
Ion channels [BR:
uar04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
123788447 (TRPC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TRP_2
Ank_2
Ank_4
LHD_TRPY1
Motif
Other DBs
NCBI-GeneID:
123788447
NCBI-ProteinID:
XP_045647882
LinkDB
All DBs
Position
Unknown
AA seq
503 aa
AA seq
DB search
MMAALYPSTDLSGASSSSLPSSPSSSSSPNEVMALKDVREVKEENTLNEKLFLLACDKGD
YYMVKKILEENSSGDLNINCVDVLGRNAVTITIENENLDILQLLLDYGCQSADALLVAID
SEVVGAVDILLNHRPKRSSRPTIVKLMERIQNPEYSTTMDVAPVILAAHRNNYEILTMLL
KQDVSLPKPHAVGCECTLCSAKNKKDSLRHSRFRLDIYRCLASPALIMLTEEDPILRAFE
LSADLKELSLVEVEFRNDYEELARQCKMFAKDLLAQARNSRELEVILNHTSSDEPLDKRG
LLEERMNLSRLKLAIKYNQKEFVSQSNCQQFLNTVWFGQMSGYRRKPTCKKIMTVLTVGI
FWPVLSLCYLIAPKSQFGRIIHTPFMKFIIHGASYFTFLLLLNLYSLVYNEDKKNTMGPA
LERIDYLLILWIIGMIWSDIKRLWYEGLEDFLEESRNQLSFVMNSLYLATFTLKVVAHNK
GLYGTDVLIPILQIRKTKLRDIK
NT seq
1512 nt
NT seq
+upstream
nt +downstream
nt
atgatggcggccctgtacccgagcacggatctctcgggcgcctcctcctcctccctacct
tcctccccatcttcctcttcgtcgccgaacgaggtgatggcgctgaaggatgtgcgggag
gtgaaggaggagaacaccctgaatgagaagcttttcttgctggcgtgcgacaagggtgac
tattatatggttaaaaagattttggaggaaaacagttcaggtgacttgaacataaattgc
gtagatgtgcttgggagaaatgctgttaccataactattgaaaacgaaaacttggatata
ctgcagcttcttttggactacggttgtcagtccgcagatgcacttttggtggcaatcgac
tctgaagtagtgggagctgttgatatactacttaatcatcgaccaaaacgatcatcaaga
ccaactatagtaaaactaatggagcgaattcagaatcctgagtattcaacaactatggac
gttgcgcctgtcattttagctgctcatcgtaacaactatgaaattcttacaatgctgtta
aaacaggatgtatctctacccaagccccatgctgttggctgtgagtgcacattgtgttct
gcaaaaaacaaaaaggacagcctccgacattccaggtttcgtcttgatatatatcgctgt
ttggccagtccagctctaataatgttaacagaggaggatccaattctgagagcatttgaa
cttagtgctgatttaaaagaattaagccttgtggaggtggaattcaggaatgattatgag
gaactagcccgacaatgtaaaatgtttgctaaagatttgcttgcacaagcccggaattca
cgagaattggaagttatcctaaaccatacatctagtgatgagcctcttgacaaacgggga
ttactagaagaaagaatgaatttaagtcgtctaaaacttgctatcaaatataaccaaaag
gagtttgtctcacagtctaactgccagcaattcctgaacactgtttggtttggacagatg
tccggttaccgacgtaagcccacctgtaagaagataatgactgttttgacagttggcatc
ttttggccagttttgtcactttgttatttgatagctcccaaatctcagtttggcagaatc
attcacactccttttatgaaatttattattcatggagcatcatatttcacattcctgctg
ttactaaacctctactctcttgtatacaatgaggataagaaaaacacgatggggccagcc
cttgaaagaatagactatctacttatactgtggattattgggatgatttggtcagacatt
aaaagactctggtacgaaggattggaagactttttggaagaatcccgtaatcaactcagt
tttgtcatgaattcactttatttggcaacttttaccctcaaagtggtggctcacaacaag
ggactctatgggacagatgtccttatccccattttgcaaataaggaaaacgaagctcaga
gatattaagtaa
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