KEGG   Ursus americanus (American black bear): 123788529
Entry
123788529         CDS       T07931                                 
Symbol
GEMIN5
Name
(RefSeq) gem-associated protein 5 isoform X1
  KO
K13133  gem associated protein 5
Organism
uar  Ursus americanus (American black bear)
Brite
KEGG Orthology (KO) [BR:uar00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:uar03019]
    123788529 (GEMIN5)
   03041 Spliceosome [BR:uar03041]
    123788529 (GEMIN5)
Messenger RNA biogenesis [BR:uar03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    eIF4F and regulatory proteins
     123788529 (GEMIN5)
   mRNA cycle factors
    P-body specific factors
     123788529 (GEMIN5)
Spliceosome [BR:uar03041]
 Other splicing related proteins
  Proteins involved in snRNP biogenesis
   SMN complex factors
    123788529 (GEMIN5)
SSDB
Motif
Pfam: GEMI5_RBS TPR_GEMI5 Beta-prop_THOC3 WD40_CDC20-Fz Beta-prop_WDR3_1st Beta-prop_RIG_2nd Beta-prop_WDR5 Beta-prop_EML_2 WD40_Prp19 WD40 WD40_WDHD1_1st ANAPC4_WD40 Beta-prop_WDR36-Utp21_1st Beta-prop_WDR3_2nd WDR55 Beta-prop_CAF1B_HIR1 EIF3I Beta-prop_WDR90_POC16_2nd Beta-prop_WDR36-Utp21_2nd Beta-prop_HPS5 Beta-prop_EML Beta-prop_IFT140_1st Beta-prop_WDR19_1st Beta-prop_TEP1_2nd Beta-prop_RIG_1st Beta-prop_Aladin Beta-prop_WDR75_1st WD40_Gbeta WDR90_beta-prop_4th WD40_MABP1-WDR62_2nd Beta-prop_TEP1_C WD40_RFWD3 Beta-prop_EIPR1 MIOS_WD40 WD40_MABP1-WDR62_1st Beta-prop_WDR35_TULP_N Beta-prop_WDR41 NBCH_WD40 Tricorn_2nd
Other DBs
NCBI-GeneID: 123788529
NCBI-ProteinID: XP_045647927
LinkDB
Position
Unknown
AA seq 1509 aa
MGQEPRTLPPSPNWYCARCSDAVPGGLFGFAARTSVFLVRVGPSAGAIPGTPPFRVIGEL
VGHTERVSGFTFSHHPGQYHLCATSSDDGTVKIWDVETKTVVTEHALHQHTISALHWSPQ
VKDLIVSGDEKGVVFCYWLNRNDSQHLFIEPRTIFCLTCSPHHEDLVAIGYKDGIVVIID
ISKKGEVIHRLRGHDDEIHSIAWCPLPGEDCLSINQEENSEEPEIPNGKVIAQTPVTKGC
YLATGSKDQTIRIWSCSRGRGVMILKLPFLKRRGGGIDPTIKERLWLTLHWPKDQPTQLV
SSCFGGELLLWDLTQSWRRKYTLFSASSEGQNHSRIVFNLCPLQTEDDKQLLLSTSMDRD
VKCWDMATLECCWTLPSLGGFAYSLAFSPVDMGCLAIGVGDGMIRVWNTLSIKNNYDVKN
FWQGVKSKVTALCWHPTKEGCLAFGTDDGKVGLYDTYSNKPPQISSTYHKKTVYTLAWGP
PLPPISLGGEGDRPSLTLYSCGGEGVVLQHNPWKLGGEAYDINKLIRDTNSIKYKLPVHT
EISWKADGKIMALGNEDGSIEIFQVPNLKLICTIQQHHKLVNTISWHHEHGSQPELSYLM
ASGSNNAVIYVHNLKTVIESNPESPVTVTEPYRTLSGHTAKITSVAWSPHHDGRLVSASY
DGTAQVWDTLREEPLCNFRGHRGRLLCVAWSPLDPDCIYSGADDFCVYKWLTSMQEHSRP
PQGKKSIELEKKRLSQPKPKPKKKKKPTSRAPIKQEVYDGNEDESIRESSGPVENGVSDQ
EGEEEAREPEFPSGVASVASREPVTCAPVLLGFEKSKVTVNNKVTLLKKEPPKEKPESLT
KKRKARSMLPLTTSLDHRSKEELHQDCLVLATAKHSKAELNEEVSTDLEERFHLGLFTDR
AALYRMIEVEGKGHLENGHPELFHQLMLWKGDLKGVLQTAAERGELTDSLVAMAPVAGYH
VWLWAVEAFAKQLCFQDQYVKAASHLLSIHKVYEAVELLKSNHFYREAIAVAKARLRPED
PILKDLYLTWGAILEKDGHYAVAAKCYLGAASAYDAAKVLAKKGDAASLKTAAELASIVG
ENELSSSLALRCAQELLLARNWVGAQEALKLHESLKGQRLVFCLLELLSKHLEERQLSEA
KSSSYNAWAAGTDGPFVERVTAVWKSIFSLDTPEQYQAALQQLQSIKYPSATNNTPSKQL
LLHICHDLTLAVLSQQVASWDAAVEALLRAVVRSYDSGNFTIMQEVHSAFLPEGCDHLRD
KLGEHQSPTTPAFKSLEAFFIYGHLYEFWWSLSRPCPKSSVWVRAAHRRTTSVEQSQQIN
NASTEETDPKVSEPEPSRPPELDVRLTEQSEQMLITCKELFSEKHASLQNSQRTVAEVQE
TLAEMIRQHQKSQVCKSSTSGPDKNESEQVAEQSLSSPPSECKEEKNQPLSLPELTKRLT
EANEKIAKFPESVKTWPFPDVLECCLILLHIGSQCPGSVTQDMQQQAQELLQKYGNTKVY
KRYCQTFCT
NT seq 4530 nt   +upstreamnt  +downstreamnt
atgggacaggagccgcgcacgctgccgccctctcctaactggtactgtgcccgatgcagc
gatgccgtgcccgggggcctcttcggcttcgcagcgcggacctccgtcttccttgtccgc
gtgggcccgagcgccggcgcgatccctgggacgcccccatttcgagtcataggggagttg
gtgggacacaccgaaagggtctctggcttcacgttttctcatcacccgggtcaataccac
ctctgtgccaccagctctgatgatggaactgtgaaaatctgggatgtagagacaaaaaca
gttgtgacagaacatgctctccatcagcatacaatatcagcattgcattggtctcctcaa
gtaaaggatttaatagtatctggagatgaaaaaggagtagttttctgttactggcttaac
agaaatgacagccagcacctctttatagaacccaggacaattttctgtcttacttgctca
cctcatcatgaagatttagtagccattggctacaaggatggcatagtggttataattgac
atcagtaagaaaggagaagttattcacaggcttcgaggccacgatgatgagatccactcc
atagcctggtgtcccctgcctggtgaagactgtttatccataaatcaagaggaaaattca
gaagaacctgaaattcccaatggtaaagttatagcacaaactccagtaacaaaaggctgc
tacttagccactggaagcaaagatcagaccattcgaatctggagctgctctcgaggccga
ggggtgatgattttgaaattaccctttctgaagagaagaggagggggtatagacccaact
attaaagaacgcctttggttgacactccattggcccaaggatcaaccaacacagctggta
tccagctgttttggaggcgagctgttgctgtgggatctcactcagtcttggagacggaaa
tataccctctttagtgcttcatcagaagggcagaatcattcaagaattgtatttaattta
tgccctttacaaactgaggatgacaaacagctgctgctttccacatcaatggatagagat
gtaaaatgttgggacatggccaccctcgagtgctgctggaccctaccttccctcggtggg
tttgcctatagcctggctttctctcctgtggacatgggctgtttggccataggcgttggg
gatggtatgatccgtgtatggaatacactctccatcaagaacaactatgatgtgaaaaat
ttttggcagggtgtcaagtccaaggttacagcgctgtgctggcatccaaccaaggaaggc
tgcttagcttttgggactgatgatgggaaagtgggattgtatgacacctactccaacaaa
cctccacagatttctagcacatatcacaagaagactgtgtacactttagcctgggggcca
ccactgccccccatttcactcggaggagaaggagacagaccttccctcactttatacagc
tgcggaggggaaggggttgtcttacagcataacccctggaagcttggtggagaggcctat
gatattaacaaactcatcagggacaccaattcaatcaagtacaaattgccggtacacaca
gagatcagctggaaagcagatggcaaaatcatggctcttggcaacgaagatggatcaata
gaaatatttcaggttcccaacctgaaactgatatgcaccatccagcagcatcacaagctt
gtgaataccattagctggcatcatgagcatggcagtcagccggagctgagctatctgatg
gcctctgggtccaacaatgcggtcatttacgtgcacaacctaaagactgtcatagagagc
aatcctgaatctccagtgaccgttacagagccctaccggaccctgtcagggcacacagcc
aagattaccagtgtggcttggagcccgcatcatgatggaaggctggtatctgcttcctac
gatggtacagctcaggtgtgggatactctccgagaagagcctctttgcaatttccgagga
cacagaggtcgactgctttgtgtggcgtggtccccactggatccagactgcatctactca
ggggcagatgacttctgtgtgtacaaatggctcacttccatgcaagaacattcccggcct
cctcaaggtaagaagagtattgaattagagaaaaaaaggctctctcaacctaagccaaag
cccaaaaagaagaaaaagcccacctcaagagctcccataaagcaggaagtgtacgatggg
aatgaagacgagagcatcagggagagctcaggacctgttgagaatggcgtgtcagaccag
gagggtgaggaggaagcccgggagccagaattccccagtggcgttgcctcagtggcttct
agagaaccagttacctgcgctccggttttattaggctttgaaaagtcaaaggtcactgtt
aataacaaagtcactttactgaagaaggagccacctaaagagaagccagaatccttaacc
aagaagcgaaaagctcgttccatgcttccactgactaccagcctggaccacaggtccaag
gaggagcttcatcaggactgtttggtattagcaactgcaaaacactccaaagcagagcta
aatgaggaggtgtctactgatcttgaggaaagatttcacctggggcttttcacagaccgg
gctgccctgtacagaatgattgaggttgaaggaaaaggtcacttggaaaatggccacccc
gaattatttcaccagctcatgctttggaaaggagatctaaaaggtgttcttcagacagca
gcagaaagaggggagctgacagacagtcttgtggcaatggcaccagttgccggctaccat
gtgtggctgtgggccgtggaagcttttgccaaacagctgtgctttcaagatcagtatgtc
aaggctgcctctcacctactttctatccacaaagtgtacgaagctgtagagctgctcaag
tcaaaccatttctacagggaagctattgcagttgccaaggcccgattgcgcccagaggac
ccaatcctgaaagacctatatctcacctggggagccatcctggaaaaagacggccattat
gctgtagcggccaaatgctatttaggggctgcttctgcttacgatgcagccaaagttttg
gccaagaagggagacgcagcatcacttaagactgctgcagagttggcttcaattgtggga
gagaatgagttgtcctcttccctggctctccgatgtgcccaggagctgcttttggccagg
aactgggtgggtgctcaggaagccctgaagctacatgaaagtctaaaggggcagagactg
gtgttttgccttcttgagctactgtccaagcacctggaggaaaggcagctttcagaggcc
aaaagttcttcctacaacgcttgggctgcaggcactgacgggcccttcgtggagagggtg
acggctgtatggaagagcatcttcagcctggataccccagagcagtatcaggcagcacta
cagcagctgcagagtatcaagtacccgtctgctacaaataacactccctccaaacagctt
ctgcttcacatttgccatgacctgaccttggcagtgctgagccagcaagtggcctcctgg
gacgcagctgtggaagccctgcttcgggctgtggtccggagctacgattcaggaaacttc
accatcatgcaggaagtacactcagcctttcttcctgagggctgtgaccatctaagagac
aaactgggcgaacatcagtcccccaccacaccagctttcaaaagcttggaggcctttttt
atttatgggcatctgtatgaattctggtggtctctctccaggccttgccccaaatccagt
gtttgggtaagggctgctcacagaaggacaacctctgttgagcaaagccagcagataaac
aatgccagcactgaagaaacggaccccaaagtttccgagccagagccaagcaggcctcca
gaattagatgtgagactcacagaacaaagcgagcaaatgctgatcacttgtaaagagctc
ttttcagaaaagcatgccagtctccaaaactcacagagaaccgttgctgaagtccaggag
accttggcagaaatgatccgccaacaccagaagagtcaagtctgtaaatcttcaacaagt
ggtcctgataagaatgaatcagaacaggtagcagaacagtccctctctagtcctccgagc
gagtgtaaagaagaaaaaaatcagccactttctctgcctgaattaaccaaaaggcttacg
gaggcaaatgagaaaatagctaaatttcctgagagtgttaagacctggcccttcccagac
gtgctggagtgctgccttatcctgcttcacattgggtcccagtgtcctggcagcgtgacc
caggacatgcagcaacaggcccaagagctccttcagaaatatggcaacactaaagtttac
aaaagatactgccagaccttctgcacgtga

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