Ursus americanus (American black bear): 123789428
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Entry
123789428 CDS
T07931
Symbol
VPS41
Name
(RefSeq) vacuolar protein sorting-associated protein 41 homolog isoform X1
KO
K20184
vacuolar protein sorting-associated protein 41
Organism
uar
Ursus americanus (American black bear)
Pathway
uar04140
Autophagy - animal
uar04148
Efferocytosis
uar05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
uar00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
123789428 (VPS41)
04148 Efferocytosis
123789428 (VPS41)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
123789428 (VPS41)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
uar04131
]
123789428 (VPS41)
Membrane trafficking [BR:
uar04131
]
Endosome - Lysosome transport
Tethering complex
Hops complex
123789428 (VPS41)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_Vps41
Beta-prop_Vps41
zf-RING_Vps41
Clathrin
WD40_CDC20-Fz
WD40_Prp19
ANAPC4_WD40
zf_RING_Vps8_fungal
Beta-prop_EML_2
Vps39_1
WD40_WDHD1_1st
Beta-prop_HPS5
Beta-prop_RIG_2nd
zf_RING_Vps8
TPR_PEP5_VPS11
Frtz
zf-RING_5
zf-C3H2C3
RIG-I_C
Beta-prop_IFT140_2nd
CofB_pilin_dom
zf-RING_11
Motif
Other DBs
NCBI-GeneID:
123789428
NCBI-ProteinID:
XP_045649451
LinkDB
All DBs
Position
Unknown
AA seq
869 aa
AA seq
DB search
MNGIKMFSNTRFVFILLYNLHRETESLEESTDESEEEESEEEPKLKYERLSNGVTEILQK
DAASCMTVHDKFLALGTHYGKVYLLDVQGNITQKFDVSPVKINQISLDESGEHMGVCSED
GKVQVFGLYSGEEFHETFDCPIKIIAVHPHFVRSSCKQFVTGGKKLLLFERSWMSRWKSS
VLHEGEGNIRSVKWRGHLIAWANNMGVKIFDVTSKQRITNVPRDDISLRPDMYPCSLCWK
DNVTLIIGWGTSVKICSVKERHASEMRDLPSRYVEIVSQFETEFYISGLAPLCDQLVVLS
YVKEVSEKTEREYCARPRLDIIQPLSETCEEISSDALTVRGFQENECRDYHLEYSEGESL
FYIVSPRDVVVAKERDQDDHIDWLLEKKKYEEALMAAEISQKNIKRHKILDIGLAYINHL
VERGEYDIAARKCQKILGKNAALWEYEVYKFKEIGQLKAISPYLPRGDPVLKPLIYEMIL
HEFLESDYEGFATLIREWPGDLYNNSVIVQAVRDHLKKDSQNRTLLKTLADLYTYDKNYG
NALEIYLTLRHKDVFQLIHKHNLFSSIKDKIVLLMDFDSEKAVDMLLDNEDKISIKKVVE
ELEDRPELQHVYLHKLFKRDHHKGQRYHEKQISLYAEYDRPNLLPFLRDSTHCPLEKALE
ICQQRNFVEETVYLLSRMGNSRSALKMIMEELHDVDKAIEFAKEQDDGELWEDLILYSID
KPPFITGLLNNIGTHVDPILLIHRIKEGMEIPNLRDSLVKILQDYNLQILLREGCKKILV
ADSLSLLKKMHRTQMKGVLVDEENICESCLAPVLPADAAKPFSVVVFHCRHMFHKECLPV
PSMNSPAQFCGICSAKHRGPGSAILEMKK
NT seq
2610 nt
NT seq
+upstream
nt +downstream
nt
atgaatggaattaaaatgttttcgaacaccagatttgtgtttatcctgctatacaacttg
caccgagaaaccgagtctctcgaagaatctacagatgagtctgaggaagaagaaagtgaa
gaggagcccaaactgaagtatgaaaggctttccaatggggtaactgaaatccttcagaag
gatgcagccagctgcatgacagtccatgacaagtttttggcactgggcacccattatggc
aaggtttatttacttgatgtccaggggaacatcactcagaagtttgatgtaagtcccgtg
aagataaatcagattagcctggacgagagtggagagcacatgggcgtgtgttcagaggat
ggcaaggtgcaggtgtttggactgtattctggagaagaatttcatgagacttttgactgt
cccattaaaatcattgccgtgcacccgcatttcgtgagatccagctgcaagcagtttgtg
actggagggaagaagttgctgctatttgaacgatcttggatgagcagatggaagtcttct
gtcctgcacgaaggggaagggaacatacggagcgtgaagtggagaggccatctgattgct
tgggccaataatatgggtgtgaagatttttgacgtcacctccaagcagagaatcaccaac
gtgccccgggatgacataagtcttcgccccgatatgtatccatgcagcctctgctggaag
gacaacgtgacgctgattattggctgggggacttctgtcaagatctgctcagtgaaggag
cggcacgccagtgaaatgagggatttgccaagtcgatatgttgagatagtgtctcagttt
gaaactgaattctacatcagtgggcttgcacctctctgcgatcagcttgtggttctttcc
tatgtgaaggaggtgtcggaaaaaacggaaagagaatactgtgccaggccaagactggat
attatccagccactctctgaaacctgtgaagagatctcttccgacgctctgacagtgaga
ggctttcaggagaacgagtgtagagattatcatttagagtactctgaaggggaatcgctc
ttctacatcgtgagtcccagagatgtggtagtagccaaggaacgagaccaagatgaccac
atcgactggctccttgaaaagaagaaatacgaggaagctttgatggcagctgaaatcagc
cagaagaacattaaaagacataagattctagatattggcttggcgtatataaaccacctg
gtggagagaggggagtatgacatagcagcacgcaaatgccagaaaattcttgggaaaaat
gcagcactctgggaatatgaagtttataaatttaaagaaattggacagctcaaggctatt
agtccttacttgccaagaggagatccagttctgaaaccactcatctatgaaatgatctta
catgaatttttggaaagtgattacgagggttttgccactctgatccgagaatggcctgga
gatctgtacaacaattcagtcatcgttcaagcggttcgggaccacctgaagaaagatagt
cagaataggaccttgctcaaaaccctggccgacttgtacacctatgacaaaaactatggc
aatgctctggaaatatacttaacattaagacacaaggatgttttccagttgatccacaag
cataatcttttcagttctatcaaggataaaattgttttattaatggattttgattctgag
aaagctgtcgacatgcttttggacaacgaagacaaaatttcaattaaaaaggtagtggaa
gaactggaagacagaccagagttgcagcacgtgtatctgcataagctttttaagagagac
catcataaggggcagcgctaccatgaaaaacagatcagtctttatgctgaatatgatcga
ccaaacttacttccctttctccgagatagtacccattgcccactcgaaaaggctcttgag
atctgtcaacagagaaacttcgtagaagagacagtttatcttctgagccgaatggggaat
agccgaagtgccctgaagatgatcatggaggaattacatgatgttgataaagcaattgaa
tttgccaaggagcaagacgatggagaactctgggaagatctgattttatattccatcgac
aaaccaccatttatcactggcttgttaaacaacatcggcacgcatgtggacccaattctc
ttgattcaccgtattaaggaagggatggagatccccaatttgagagactccttggttaaa
attctgcaagactacaatttgcaaattctgcttcgtgaaggctgcaagaagattctcgta
gcggactctttgtccttactgaagaaaatgcaccgaactcaaatgaaaggcgttctggtc
gatgaggagaacatttgtgaatcgtgccttgcccctgttcttccagcagatgccgctaag
cccttcagcgtggtggtcttccactgccgccacatgttccacaaggagtgcctgcccgtg
cccagcatgaactcccccgcgcagttctgcggcatctgcagcgccaagcaccgcggcccg
gggagcgccatcttggagatgaagaagtag
DBGET
integrated database retrieval system
