Ursus americanus (American black bear): 123790010
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Entry
123790010 CDS
T07931
Symbol
HDAC4
Name
(RefSeq) histone deacetylase 4 isoform X1
KO
K11406
histone deacetylase 4/5 [EC:
3.5.1.98
]
Organism
uar
Ursus americanus (American black bear)
Pathway
uar04371
Apelin signaling pathway
uar04613
Neutrophil extracellular trap formation
uar05034
Alcoholism
uar05203
Viral carcinogenesis
uar05206
MicroRNAs in cancer
Brite
KEGG Orthology (KO) [BR:
uar00001
]
09130 Environmental Information Processing
09132 Signal transduction
04371 Apelin signaling pathway
123790010 (HDAC4)
09150 Organismal Systems
09151 Immune system
04613 Neutrophil extracellular trap formation
123790010 (HDAC4)
09160 Human Diseases
09161 Cancer: overview
05206 MicroRNAs in cancer
123790010 (HDAC4)
05203 Viral carcinogenesis
123790010 (HDAC4)
09165 Substance dependence
05034 Alcoholism
123790010 (HDAC4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
uar03036
]
123790010 (HDAC4)
Enzymes [BR:
uar01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
123790010 (HDAC4)
Chromosome and associated proteins [BR:
uar03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class II HDACs
123790010 (HDAC4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Hist_deacetyl
HDAC4_Gln
Motif
Other DBs
NCBI-GeneID:
123790010
NCBI-ProteinID:
XP_045649923
LinkDB
All DBs
Position
Unknown
AA seq
1116 aa
AA seq
DB search
MSSQSHPDGLSGRDQPVELLTPARVNHMPSTVDVASALPLQVAPPAVPMDLRLDHQFALP
VAEPTLREQQLQQELLALKQKQQLQRQILIAEFQRQHEQLSRQHEAQLHEHIKQQQELLA
MKHQQELLEHQRKLERHRQEQELEKQHREQKLQQLKNKEKGKESAVASTEVKMKLQEFVL
NKKKALAHRNLNHCISSDPRYWYGKTQHSSLDQSSPPQSGVSASYNHPVLGMYDSKDDFP
LRKTASEPNLKLRSRLKQKVAERRSSPLLRRKDGPVVTALKKRPLDVTDSACSSAPGSAP
SSPNNSSGNVSTENGITPAVASIPAETSLAHRLVTREGSVAPLPLYTSPSLPNITLGLPA
TGPSAGAAGQQEAERLALPALQQRISLFPGTHLTPYLSTAPLERDSGAAHNPLLQHMVLL
EQPPTQTPLVTGLGALPLHAQPLVGTDRVSPSMHKLRQHRPLGRTQSAPLPQNAPALQHL
VIQQQHQQFLEKHKQHFQQQLHMNKIIPKQNEPARQPESHPEETEEELREHQALLEEPYL
DRLSGQKEAHALAGVQVKQEPIESDDEEAEPPRDVESGQRQPTEQELLFRQQALLLEQQR
IHQLRNYQASMEAAGIPVSFGGHRPLSRAQSSPASATFPMSVQEPPTKPRFTTGLVYDTL
MLKHQCACGNSNSHPEHAGRIQSIWSRLQETGLRGKCECIRGRKATLEELQTVHSEAHAL
LYGTNPLNRQKLDSKKLLGSLTSVFVRLPCGGVGVDSDTIWNEVHSSGAARLAVGCVVEL
VFKVATGELKNGFAVVRPPGHHAEESTPMGFCYFNSVAIAAKLLQQRLDVSKTLIVDWDV
HHGNGTQQAFYNDPNVLYISLHRYDDGNFFPGSGAPDEVGTGPGVGFNVNMAFTGGLDPP
MGDAEYLAAFRTVVMPIANEFAPDVVLVSSGFDAVEGHPTPLGGYNLSAKCFGHLTKQLM
GLAGGRIVLALEGGHDLTAICDASEACVSALLGNELDPLPEKVLQQRPNANAVRSMEKVI
EIHSQYWRSLPRLCSTVGHSLVEAQKCENEEAETVTAMASLSVGVKPTEKRLDSFQIANT
FATGQLPAGACFRPALFGQDPSRSEPPCTYVPNEFL
NT seq
3351 nt
NT seq
+upstream
nt +downstream
nt
atgagctcccaaagccatccagatggactttctggccgagaccagcccgtggagctgctg
acccctgcccgcgtgaaccacatgcccagcacggtggatgtggcctctgcgctgcctctg
caggtcgctcccccggcggtgcccatggacctccgcctggaccaccagtttgcgctgccc
gtggcggagcccaccctccgggagcagcagctgcagcaggagctgctggccctcaagcag
aagcagcagctccagaggcagatcctcatcgccgagttccaaaggcagcacgagcagctc
tcccggcagcacgaggcccagctgcacgagcacataaaacaacagcaggagctgctggcc
atgaagcaccagcaggagctgctggagcaccagcggaagctcgagaggcaccgccaggag
caggagctggagaagcagcaccgggagcagaagctgcagcagctgaagaacaaggagaaa
ggcaaggagagtgcggtggccagcacagaagtgaagatgaagttgcaagagtttgtcctc
aataagaagaaggcgctggcccaccggaacctcaaccactgcatttccagcgaccctcgc
tactggtacgggaagacacagcacagttcccttgaccagagctccccgccccagagcggg
gtgtcggcctcctacaaccatccagtcctgggaatgtatgacagcaaagatgacttcccg
ctcagaaaaacagcctctgaacccaatttgaaattacggtccaggctaaagcagaaagtg
gccgaacgacggagcagccccctgctacgtaggaaagatgggccagtggttacagctctg
aagaagcgtccgctggatgtcacagactcggcgtgcagcagcgcccccggctccgcgccc
agctcccccaacaacagctccgggaacgtcagcacggagaacgggatcacgcccgcagtc
gccagcatcccagccgagaccagcttggcgcacagactcgtgactcgagaaggctccgtg
gccccgctccccctctacacgtcgccatccttgcccaacatcacgctgggactgcccgcc
accggcccgtctgctggggcagccggccagcaggaagccgagagactcgctctcccagcc
ctccagcagcggatctccctcttccccggcacccacctcactccctacctgagcacggcg
cccctggagcgcgacagcggggctgcgcacaacccgctcctgcagcacatggtcctgctg
gagcagccgcccacgcagacaccccttgtcacaggcctgggagcgctgcccctgcacgcg
cagcctctggtgggtacggaccgcgtgtccccgtccatgcacaagctgcggcagcaccgc
ccgctggggcgcacccagtcggccccactgccccagaacgcgccggccctgcagcacctg
gtgatccagcagcagcaccagcagttcctggagaagcacaagcagcacttccagcagcag
ctgcacatgaacaagattatccccaaacagaacgagccggcccggcagcccgagagccac
cccgaggagaccgaggaggagcttcgcgagcaccaggcccttctggaggagccctacctg
gaccggctgtcaggacagaaggaggcgcatgcactggccggagtgcaggtgaagcaggag
cccatcgagagtgacgatgaggaggcggagcccccgcgggacgttgagtctggccagcgc
cagcccacggagcaggagctgctcttcagacagcaagccctcctcctggagcagcagcgg
atccaccagctgaggaactaccaggcgtccatggaggccgccggcatccccgtgtccttt
ggcggccaccggcctctgtcccgggcacagtcttccccggcatctgccaccttccccatg
tctgtgcaggaaccccccaccaaaccgaggttcaccacaggccttgtatacgacacgctg
atgctgaagcaccagtgcgcctgcgggaacagcaacagccaccccgagcacgccggccgc
atccaaagcatctggtcgcggctgcaggagaccggcctccgaggcaaatgcgagtgcatc
cgcggacggaaggccacgctggaggagctgcagacggtgcactcggaggcgcacgccctg
ctgtacggcacaaaccccctcaacaggcagaaactggacagtaagaaacttctaggctcg
ctaacgtctgtgtttgtcaggctgccctgcggtggtgttggggtggacagcgacaccata
tggaacgaggtgcactcgtcgggggcggcccgcctggccgtgggctgcgtggtcgagctg
gtcttcaaggtggccacgggggagctgaagaacggctttgccgtggtccgccctccagga
catcacgcggaggagagcacacccatgggcttctgctactttaactccgtggccatcgca
gccaagcttctccagcagcggctggatgtgagcaagaccctcatagtggattgggacgtt
caccacggaaacgggacccagcaggccttctacaatgacccgaatgtcctgtacatctcc
cttcaccgctatgacgacgggaacttcttcccgggcagtggggctccggacgaggtgggc
acaggaccaggtgtgggcttcaacgtcaacatggctttcaccggcggccttgaccccccc
atgggagacgcggagtacttggcggccttcaggactgtggtcatgcccatcgcgaacgag
tttgccccagacgtggtgctcgtgtcgtcaggcttcgacgctgtggagggccaccccacg
cccctcggcggctacaacctctcggccaaatgtttcgggcacctgacgaagcagctgatg
ggcttggccggcggccggatcgttctggccctggaggggggccacgacctcacagccatc
tgcgacgcctcggaagcatgtgtttctgctttgctgggcaacgagcttgatcctctccca
gagaaggttttacagcagagacccaatgctaacgcggtccggtccatggagaaagtcatt
gaaatccacagccagtactggcgctccctgccgcgcctctgctccacggtggggcactct
ctggtagaggcccagaagtgcgagaacgaggaagccgagaccgtcaccgccatggcctcg
ttgtccgtgggcgtgaagcccaccgagaagaggttggatagctttcagatcgccaacacg
ttcgccactgggcagctacctgcaggtgcgtgctttcgtcccgctcttttcggacaggac
ccctcccgctccgagcctccgtgcacatatgtacctaatgagtttttatag
DBGET
integrated database retrieval system
