Ursus americanus (American black bear): 123790051
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Entry
123790051 CDS
T07931
Symbol
ATG16L1
Name
(RefSeq) autophagy-related protein 16-1 isoform X1
KO
K17890
autophagy-related protein 16-1
Organism
uar
Ursus americanus (American black bear)
Pathway
uar04136
Autophagy - other
uar04140
Autophagy - animal
uar04621
NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
uar00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
123790051 (ATG16L1)
04136 Autophagy - other
123790051 (ATG16L1)
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
123790051 (ATG16L1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
uar04131
]
123790051 (ATG16L1)
03029 Mitochondrial biogenesis [BR:
uar03029
]
123790051 (ATG16L1)
Membrane trafficking [BR:
uar04131
]
Autophagy
Autophagosome formation proteins
Atg12 conjugation proteins
123790051 (ATG16L1)
Others
Specific organelles associated proteins
Auto phagosome
123790051 (ATG16L1)
Mitochondrial biogenesis [BR:
uar03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
123790051 (ATG16L1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ATG16
WD40
WD40_Prp19
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_EML_2
WDR55
EIF3I
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_EML
Beta-prop_WDR75_1st
Beta-prop_TEP1_C
Beta-prop_WDR90_POC16_2nd
Beta-prop_DCAF4
WD40_MABP1-WDR62_1st
Beta-prop_SCAP
WDR90_beta-prop_4th
Beta-prop_RIG_2nd
Beta-prop_EIPR1
ANAPC4_WD40
WD40_RFWD3
Beta-prop_IFT122_1st
eIF2A
Beta-prop_IFT140_1st
Beta-prop_HPS5
Beta-prop_DCAF12
CCDC93_CC
ZapB
Beta-prop_NWD2_C
KASH_CCD
TolB_like
Phage_GPO
Fez1
Motif
Other DBs
NCBI-GeneID:
123790051
NCBI-ProteinID:
XP_045650052
LinkDB
All DBs
Position
Unknown
AA seq
623 aa
AA seq
DB search
MSSGLRAADFPRWKRHISEELRRRDRLQRQAFEEIILQYNKLLEKSDLHSVLAHKLQAEK
HDIPNRHEISPGHDGAWNDSQQQEMAQLRIKHQEELTELHKKRGELAHWVIELKNQMQQK
DREMQMNEAKIAECLQTISDLETECQELRSKLQDLERANQTLKDEYDALQITFTALEEKL
RKTTEENQELVTRWMAEKAQEANRLNAENEKDSRRRQARLQKELAEAAKEPLPVEQDDDI
EVIVDETSDHTEETSPVRAIGRAATKRLSQPAGGLLDSITNIFGLSESPLLGHHSSDAAR
RRSVSSFPVPQDNVDPHPGSSKEVRVPTTAMCIFDAHDGEVNAVQFSPGSRLLATGGMDR
RVKLWEVFGDKCELKGSLSGSNAGITSIEFDSAGSYLLAASNDFASRIWTVDDYRLRHTL
TGHSGKVLSAKFLLDNARIVSGSHDRTLKLWDLRSKVCIKTVFAGSSCNDIVCTEQCVMS
GHFDKKIRFWDIRSESTVREMELLGKITALDLNPERTELLSCSRDDLLKIIDLRINAVRQ
TFSAPGFKCGSDWTRVVFSPDGGYVAAGSAEGSLYIWSVLSGKVEKVLSKQHGSSINAVA
WSPSGSHVVSVDKGSKAVLWSEY
NT seq
1872 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtcgggcctccgcgccgccgatttcccccgctggaagcgccacatttcggaggag
ctgaggcggcgggaccggctgcagaggcaggcattcgaagagatcatcctgcagtataac
aagttgctagaaaagtcagatcttcattcagtgctggcccataagctacaagctgaaaag
catgacatccccaacaggcatgagataagtcccggacacgatggtgcctggaatgatagt
cagcaacaagaaatggcccagctgagaattaaacaccaagaagaactcactgaactgcat
aagaagcgtggggagttagctcactgggtgattgagctgaaaaaccaaatgcagcagaag
gacagggagatgcagatgaatgaagcaaaaattgcagaatgcttgcagactatctctgac
ctggagacggagtgccaagaactacgcagtaagctgcaggacctcgaaagagccaaccag
accctgaaggacgagtatgatgccctgcagatcacgtttactgccttggaggagaagctg
aggaaaactactgaagagaaccaggagttggtcaccaggtggatggccgagaaagcccag
gaagccaatcgcctaaatgcagagaatgaaaaagattcaaggaggcggcaggcccggctg
cagaaagagcttgcagaagcagcgaaggaacctctacccgttgaacaggacgatgacatt
gaagtcattgtggacgaaacctctgatcacactgaggagacgtctcctgtgcgagccatc
ggcagagcagccactaagcgactctcgcagcctgctggaggccttctggattctatcact
aatatctttggtctgtccgagtctcccctcttgggacatcactcttctgacgctgccagg
aggcgctctgtctcttcctttccagttccccaggataatgtggatcctcatcctggttct
agtaaagaagtgagagtgccaacaacagcgatgtgtatcttcgatgctcatgacggggaa
gtcaacgctgtgcagttcagtccgggctcccggctgctggccacaggaggcatggatcgg
agagttaagctttgggaagtgtttggagataaatgtgagctcaagggctctctgtccggc
agtaatgcagggattacgagcatcgaatttgacagcgctggatcttacctcttagcagct
tcgaatgattttgcaagtcgaatctggactgtggatgattatcggttacggcacacactc
acaggacacagtggcaaagtgctgtctgccaagttcctgctggacaatgcgcgtattgtt
tccggaagtcatgaccggaccctcaagctctgggatctacgcagcaaagtctgcataaag
acggtgtttgcaggatccagctgtaatgatatcgtttgcacggagcagtgtgtcatgagt
ggacattttgacaagaaaattcgtttctgggacatccgatcggagagcactgtccgggag
atggagctgctggggaagattactgccctggacttaaacccggagagaacggaactcctc
agctgctctcgtgatgacctgctaaagatcatcgacctgcgaatcaatgccgtcagacag
acatttagcgcgcctgggttcaagtgcggctctgattggaccagagttgtgttcagccct
gatggtggttatgtggcagcgggctccgctgagggctctctctacatctggagcgtgctc
tcggggaaagtggagaaggtcctttccaagcagcatggctcgtccatcaatgcggtggcg
tggtccccctccggctcccacgtcgtcagtgtggacaaaggaagcaaagctgtgctgtgg
tcagagtattga
DBGET
integrated database retrieval system
