Ursus americanus (American black bear): 123790051
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Entry
123790051 CDS
T07931
Symbol
ATG16L1
Name
(RefSeq) autophagy-related protein 16-1 isoform X1
KO
K17890
autophagy-related protein 16-1
Organism
uar
Ursus americanus (American black bear)
Pathway
uar04136
Autophagy - other
uar04140
Autophagy - animal
uar04145
Phagocytosis
uar04621
NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
uar00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagocytosis
123790051 (ATG16L1)
04140 Autophagy - animal
123790051 (ATG16L1)
04136 Autophagy - other
123790051 (ATG16L1)
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
123790051 (ATG16L1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
uar04131
]
123790051 (ATG16L1)
03029 Mitochondrial biogenesis [BR:
uar03029
]
123790051 (ATG16L1)
Membrane trafficking [BR:
uar04131
]
Autophagy
Autophagosome formation proteins
Atg12 conjugation proteins
123790051 (ATG16L1)
Others
Specific organelles associated proteins
Auto phagosome
123790051 (ATG16L1)
Mitochondrial biogenesis [BR:
uar03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
123790051 (ATG16L1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR5
Beta-prop_WDR3_1st
ATG16
WD40
Beta-prop_THOC3
Beta-prop_IFT122_1st
WD40_Prp19
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_EML_2
WD40_Gbeta
Beta-prop_WDR36-Utp21_2nd
WDR55
Beta-prop_WDR3_2nd
EIF3I
Beta-prop_TEP1_2nd
Beta-prop_WDR36-Utp21_1st
WD40_MABP1-WDR62_2nd
DSE1_N
Beta-prop_EML
Beta-prop_CAF1B_HIR1
Beta-prop_WDR75_1st
Beta-prop_Aladin
Beta-prop_TEP1_C
Beta-prop_DCAF4
WD40_MABP1-WDR62_1st
Beta-prop_WDR90_POC16_2nd
Beta-prop_SCAP
WDR90_beta-prop_4th
Beta-prop_RIG_2nd
Beta-prop_EIPR1
Beta-prop_NOL10_N
ANAPC4_WD40
WD40_RFWD3
eIF2A
CFAP251_N
Beta-prop_IFT140_1st
Beta-prop_VPS8
Beta-prop_HPS5
CCDC93_CC
Tricorn_2nd
Beta-prop_ACSF4
ZapB
Beta-prop_NWD2_C
KASH_CCD
CCDC186_middle
MED16_beta-prop
TolB_like
HEF_HK
Fez1
BEGAIN_coil
Motif
Other DBs
NCBI-GeneID:
123790051
NCBI-ProteinID:
XP_045650052
LinkDB
All DBs
Position
Unknown
AA seq
623 aa
AA seq
DB search
MSSGLRAADFPRWKRHISEELRRRDRLQRQAFEEIILQYNKLLEKSDLHSVLAHKLQAEK
HDIPNRHEISPGHDGAWNDSQQQEMAQLRIKHQEELTELHKKRGELAHWVIELKNQMQQK
DREMQMNEAKIAECLQTISDLETECQELRSKLQDLERANQTLKDEYDALQITFTALEEKL
RKTTEENQELVTRWMAEKAQEANRLNAENEKDSRRRQARLQKELAEAAKEPLPVEQDDDI
EVIVDETSDHTEETSPVRAIGRAATKRLSQPAGGLLDSITNIFGLSESPLLGHHSSDAAR
RRSVSSFPVPQDNVDPHPGSSKEVRVPTTAMCIFDAHDGEVNAVQFSPGSRLLATGGMDR
RVKLWEVFGDKCELKGSLSGSNAGITSIEFDSAGSYLLAASNDFASRIWTVDDYRLRHTL
TGHSGKVLSAKFLLDNARIVSGSHDRTLKLWDLRSKVCIKTVFAGSSCNDIVCTEQCVMS
GHFDKKIRFWDIRSESTVREMELLGKITALDLNPERTELLSCSRDDLLKIIDLRINAVRQ
TFSAPGFKCGSDWTRVVFSPDGGYVAAGSAEGSLYIWSVLSGKVEKVLSKQHGSSINAVA
WSPSGSHVVSVDKGSKAVLWSEY
NT seq
1872 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtcgggcctccgcgccgccgatttcccccgctggaagcgccacatttcggaggag
ctgaggcggcgggaccggctgcagaggcaggcattcgaagagatcatcctgcagtataac
aagttgctagaaaagtcagatcttcattcagtgctggcccataagctacaagctgaaaag
catgacatccccaacaggcatgagataagtcccggacacgatggtgcctggaatgatagt
cagcaacaagaaatggcccagctgagaattaaacaccaagaagaactcactgaactgcat
aagaagcgtggggagttagctcactgggtgattgagctgaaaaaccaaatgcagcagaag
gacagggagatgcagatgaatgaagcaaaaattgcagaatgcttgcagactatctctgac
ctggagacggagtgccaagaactacgcagtaagctgcaggacctcgaaagagccaaccag
accctgaaggacgagtatgatgccctgcagatcacgtttactgccttggaggagaagctg
aggaaaactactgaagagaaccaggagttggtcaccaggtggatggccgagaaagcccag
gaagccaatcgcctaaatgcagagaatgaaaaagattcaaggaggcggcaggcccggctg
cagaaagagcttgcagaagcagcgaaggaacctctacccgttgaacaggacgatgacatt
gaagtcattgtggacgaaacctctgatcacactgaggagacgtctcctgtgcgagccatc
ggcagagcagccactaagcgactctcgcagcctgctggaggccttctggattctatcact
aatatctttggtctgtccgagtctcccctcttgggacatcactcttctgacgctgccagg
aggcgctctgtctcttcctttccagttccccaggataatgtggatcctcatcctggttct
agtaaagaagtgagagtgccaacaacagcgatgtgtatcttcgatgctcatgacggggaa
gtcaacgctgtgcagttcagtccgggctcccggctgctggccacaggaggcatggatcgg
agagttaagctttgggaagtgtttggagataaatgtgagctcaagggctctctgtccggc
agtaatgcagggattacgagcatcgaatttgacagcgctggatcttacctcttagcagct
tcgaatgattttgcaagtcgaatctggactgtggatgattatcggttacggcacacactc
acaggacacagtggcaaagtgctgtctgccaagttcctgctggacaatgcgcgtattgtt
tccggaagtcatgaccggaccctcaagctctgggatctacgcagcaaagtctgcataaag
acggtgtttgcaggatccagctgtaatgatatcgtttgcacggagcagtgtgtcatgagt
ggacattttgacaagaaaattcgtttctgggacatccgatcggagagcactgtccgggag
atggagctgctggggaagattactgccctggacttaaacccggagagaacggaactcctc
agctgctctcgtgatgacctgctaaagatcatcgacctgcgaatcaatgccgtcagacag
acatttagcgcgcctgggttcaagtgcggctctgattggaccagagttgtgttcagccct
gatggtggttatgtggcagcgggctccgctgagggctctctctacatctggagcgtgctc
tcggggaaagtggagaaggtcctttccaagcagcatggctcgtccatcaatgcggtggcg
tggtccccctccggctcccacgtcgtcagtgtggacaaaggaagcaaagctgtgctgtgg
tcagagtattga
DBGET
integrated database retrieval system
