Ursus americanus (American black bear): 123790216
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Entry
123790216 CDS
T07931
Symbol
PCDH1
Name
(RefSeq) protocadherin-1 isoform X1
KO
K16498
protocadherin delta 1
Organism
uar
Ursus americanus (American black bear)
Pathway
uar03273
Virion - Lassa virus and SFTS virus
Brite
KEGG Orthology (KO) [BR:
uar00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03273 Virion - Lassa virus and SFTS virus
123790216 (PCDH1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
uar01009
]
123790216 (PCDH1)
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
uar04515
]
123790216 (PCDH1)
Protein phosphatases and associated proteins [BR:
uar01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
123790216 (PCDH1)
Cell adhesion molecules [BR:
uar04515
]
Cadherins
Protocadherins
123790216 (PCDH1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Protocadherin
Cadherin_2
Cadherin_CELSR2_9th
Motif
Other DBs
NCBI-GeneID:
123790216
NCBI-ProteinID:
XP_045650365
UniProt:
A0A452SGY6
LinkDB
All DBs
Position
Unknown
AA seq
1233 aa
AA seq
DB search
MDSRAGGRRCPEAALLILDPSRMGPLRPSPGPGGQRLLLLALLLLLAASPGHATRVVYKV
PEEQPPNTLIGSLAADYGFPDVGHLYKLEVGAPYLRVDGKTGDIFTTETSIDREGLRECQ
NQLPGEPCILEFEVSITDLVQNGSPRLLEGQIEVQDINDNTPNFASPVITLPIPENTNIG
SLFPIPVASDRDAGPNGVASYELQAGPEAQELFGLQVAEDQEGKQPQLIVMGNLDRERWD
SYDLTIKVQDGGSPPRASSALLRVTVLDTNDNAPKFERPSYEAELSENSPIGHSVIQVKA
NDSDQGANAEIDYTFHQAPEVVRRLLRLDRNTGLITVQGPVDREDLSTLRFSVLAKDRGT
NPKSARAQVVVTVKDMNDNAPTIEIRGIGLVTHQDGMANISEDVAEETAVALVQVSDRDE
GENAAVTCVVANDVPFQLRQASETGSDSKKKYFLQTTTPLDYEKVKDYTIEIVAVDSGNP
PLSSTNSLKVQVVDVNDNAPVFTQSVTEVAFPENNKPGEVVAEVTASDADSGSNAELVYS
LEPEPAAKGLFTISPDTGEIRVKTSLDREQRDSYELKVVAADRGSPSLQGTATVLVNVLD
CNDNDPKFMLSGYNFSVMENMPALSPVGMVTVIDGDKGENARVQLTVEQDNGDFVIQNGT
GTILSSLSFDREHQSTYTFQLKAVDGGVPPRSAYVGVTINVLDENDNAPFITAPSNTSHQ
LLTPQTRLGETVSQVTAEDIDSGVNAELTYSIAGGNPYGLFQIGSHSGAITLEKEIERRH
HGLHRLVVKVSDRGKPPRYGTALVHLYVNETLANRTLLETLLGHSLDTPLDIDIAGDPEY
ERSKQRGNILFGVVAGVVAVALLIALAVLVRYCRQREAKSGYQAGKKETKDLYAPKPSSK
ASKGNKSKGKKSKSPKPVKPVEDEDEAGLQKSLKFNLMSDAPGDSPRIHLPLNYPPGSPD
LGRHYRSNSPLPSIQLQPQSPSASKKHQVVQDLPPANTFVGTGDTTSTGSEQYSDYSYRT
NPPKYPSKQLPHRRVTFSATSQAQELQDPSQHSYYDSGLEESETPSSKSSSGPRLGPLAL
PEDHYERTTPDGSIGEMEHPENDLRPLPDVAMTGTCTQECSEFGHSDTCWMPGQSSPSRR
TKSSALKLSTFVPYQDRGGQEPVGAGSPSPPEDRNTKTAPVRLLPSYSAFSHSSHDSCKD
SATLEEIPLTQTSDFPPAATPASAQTAKREIYL
NT seq
3702 nt
NT seq
+upstream
nt +downstream
nt
atggacagcagggccggcggccggcgctgccccgaggcggccctcctgattctagatcct
tccaggatggggcccctgaggcccagcccaggccccggggggcaacggttgctgctgctg
gcactgctgcttctgctggcggcatccccaggccatgccactcgggtggtgtataaggtg
ccagaggaacagccacccaacaccctcattgggagcctcgcagctgactatggttttcca
gatgtgggccacctgtacaaactagaggtaggcgccccatacctgcgggtggatggcaag
acgggagacatcttcaccactgagacctctatcgaccgcgaggggctccgtgaatgccag
aaccagctccctggtgagccttgcatcctggagtttgaggtgtctattacggacctcgtg
cagaatggcagtccccggctgttagagggccagatagaggtacaggacatcaatgacaac
actcccaacttcgcctcgccagtcatcacgctacccatccctgagaataccaacatcggc
tcactcttccccatcccagtggcttctgaccgtgatgctggccctaacggcgtggcatcc
tatgagctgcaggccgggcccgaggcccaggagctatttgggcttcaggtggcagaggac
caggaggggaagcaaccacagctcatcgtaatgggcaacctggaccgggagcgctgggat
tcctatgacctcaccatcaaggtgcaggatggtggcagccccccacgcgccagcagtgcc
ctgctgcgagtcactgtgcttgacaccaatgacaacgcccccaagttcgagcggccctcc
tacgaggctgaactgtctgagaatagccccatcggccactcggtcatccaggtgaaggcc
aacgactcggaccaaggtgccaacgcggagatcgactacacattccaccaggcgcctgag
gtggtgaggcgtcttctgcgactggacaggaacactggacttatcactgtgcagggcccc
gtggatcgtgaggacctaagtaccctgcgcttctcagtgctcgccaaggaccgaggcacc
aaccccaagagtgcccgtgcccaagtggtggtgacggtgaaggacatgaacgacaatgcc
cccaccattgagatccggggcatagggttggtgacccatcaagacgggatggctaatatc
tcagaggatgtggcagaggagacagctgtggccctggtgcaggtatctgaccgagatgag
ggagagaatgcagctgtcacctgtgtggtggcaaatgatgtgccctttcagctacgccag
gccagtgagacgggaagtgacagcaaaaagaagtacttcctgcagaccaccactccgctc
gactacgagaaggtcaaagactacaccatagagattgtggctgtggactctggcaacccc
ccgctctccagcaccaattccctcaaggtacaggtggtggatgtcaatgacaatgcccct
gtcttcacccagagcgtcactgaggtcgctttcccagaaaacaacaagccaggtgaagtg
gtcgccgaagtcacggccagcgatgccgactcgggctccaatgcggagctggtttactct
ctggagcctgagccagctgccaagggcctcttcaccatctcacctgacactggggagatc
cgggtgaagacatcccttgatcgggaacagcgggacagttatgagttaaaggtggtggca
gctgaccggggcagccccagcctgcagggcacagccaccgtccttgtcaatgtgctggac
tgcaatgacaatgatcccaagtttatgctgagtggctacaacttctcagtgatggagaac
atgccggcgctgagtccagtgggcatggtgactgtcattgatggggacaaaggggagaat
gcccgggtacagctcacggtggagcaggacaatggtgactttgttatccaaaatggtacg
ggcaccatcctctccagcctgagctttgatcgggagcatcaaagcacctataccttccag
ctgaaggcggtggatggcggtgtcccgcctcgctcagcttacgtcggcgtcaccatcaat
gtgctggatgagaatgacaatgcgccctttatcaccgccccttccaacacctcccaccag
ctgttgaccccccagacgcgtcttggtgagacggtcagccaggtgacagctgaggacatt
gactccggtgtcaatgctgagttgacctacagcatcgctggtggcaacccttatggactc
ttccagattgggtcacattcgggtgccatcaccctcgagaaggagattgagcggcgccac
catgggctgcaccgtctggtggtgaaagtcagtgaccgtggcaagcccccacgctatggc
acggccttggtccacctttatgtcaatgagaccctggccaaccgcacgcttttggagacc
ctgctgggccacagcttggacacgcccctggacatcgacatcgctggggatccagaatac
gagcgctccaagcaacgtggcaacatcctctttggtgtggtggccggtgttgtggccgtg
gccttgctcattgccctggcagtgcttgtgcgctactgccggcagcgggaggccaagagt
ggctaccaggccggtaagaaggagaccaaggacctgtatgcccccaagcccagcagcaaa
gcctccaagggaaacaaaagcaagggcaagaagagcaagtccccgaagcccgtgaagcca
gtggaagatgaggatgaggctgggctgcagaaatccctcaagttcaacctgatgagtgat
gcccccggagacagcccccgcatccacctgcccctcaactacccaccgggcagccctgac
ctgggccgccactaccgctctaattccccgctgccttccatccagctgcagccccagtca
ccctcggcctccaagaagcaccaggtggtgcaggacctgccacccgcaaacacatttgtg
ggcactggtgacaccacgtccacaggctctgagcagtactccgactacagctaccgcacc
aacccccccaaataccccagcaagcagttacctcaccgacgcgtcaccttctccgccacc
agtcaggcccaagagctgcaggacccatcccagcacagttattacgacagtggcctggag
gagtccgagacgccatccagcaagtcatcctcgggaccccgactcggccccctggctctg
cctgaggaccactatgagcgcaccacccctgatggcagcataggagagatggagcacccc
gagaacgacctgcgccctttgcctgatgttgccatgacaggcacatgtacccaggagtgc
agtgagtttggccactccgacacgtgctggatgcctggccagtcatctcccagccgccgg
accaagagcagcgccctcaaactctccaccttcgtgccttaccaggaccgaggagggcag
gagcctgtgggcgccggcagccccagccccccggaagaccggaacaccaaaacggccccc
gtgcgcctcctgccctcctacagtgccttctcccacagtagccatgattcctgcaaggac
tcggccaccttggaggaaatccccctgacccagacctcggacttcccacctgcagccaca
ccggcatctgcccagacagccaagcgcgagatctacctgtga
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integrated database retrieval system
