Ursus americanus (American black bear): 123790885
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Entry
123790885 CDS
T07931
Symbol
HDAC6
Name
(RefSeq) histone deacetylase 6 isoform X1
KO
K11407
histone deacetylase 6 [EC:
3.5.1.98
]
Organism
uar
Ursus americanus (American black bear)
Pathway
uar04613
Neutrophil extracellular trap formation
uar05014
Amyotrophic lateral sclerosis
uar05034
Alcoholism
uar05203
Viral carcinogenesis
Brite
KEGG Orthology (KO) [BR:
uar00001
]
09150 Organismal Systems
09151 Immune system
04613 Neutrophil extracellular trap formation
123790885 (HDAC6)
09160 Human Diseases
09161 Cancer: overview
05203 Viral carcinogenesis
123790885 (HDAC6)
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
123790885 (HDAC6)
09165 Substance dependence
05034 Alcoholism
123790885 (HDAC6)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
uar01009
]
123790885 (HDAC6)
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
uar03019
]
123790885 (HDAC6)
04131 Membrane trafficking [BR:
uar04131
]
123790885 (HDAC6)
03036 Chromosome and associated proteins [BR:
uar03036
]
123790885 (HDAC6)
Enzymes [BR:
uar01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
123790885 (HDAC6)
Protein phosphatases and associated proteins [BR:
uar01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
123790885 (HDAC6)
Messenger RNA biogenesis [BR:
uar03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
123790885 (HDAC6)
Membrane trafficking [BR:
uar04131
]
Autophagy
Aggrephagy
Other aggrephagy associated proteins
123790885 (HDAC6)
Chromosome and associated proteins [BR:
uar03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class II HDACs
123790885 (HDAC6)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Hist_deacetyl
zf-UBP
zf-UBP_var
Motif
Other DBs
NCBI-GeneID:
123790885
NCBI-ProteinID:
XP_045651414
LinkDB
All DBs
Position
Unknown
AA seq
1160 aa
AA seq
DB search
MTSTGQDSTTTRQRRSRHNPHSPPHDSSVTSKRGVKKGALLHSSPSLAEVKKKGRMKKLS
QAAEQDLIVGLQGLDLNLEAKTLSGTGLVFDEQLNEFHCLWDDSFPECPERLHAIKEQLI
QEGLVDRCVSFQARFAEKEELMLVHSLEYIDLMETTQYMNEGELRILADTYDSVYLHPNS
YTCACLASGSVLRLVDAVLGNEIRNGMAIIRPPGHHAQHSLMDGYCMFNHVAVAARYAQK
KHAIQRVLIVDWDVHHGQGTQFAFDQDPSVLYFSIHRYEQGRFWPHLKASNWSTIGFGRG
QGYTINVPWNQVGMRDADYIAAFLHLLLPVALEFQPQLVLVAAGFDALQGDPKGEMAATP
AGLAQLTHLLMGLAGGKLILSLEGGYNFRSLAEGVSASLHTLLGDPCPILESPGAPCRSA
QASLSCALEALEPFWEVLVRSAETLEEDFLEEENVEKEEEGPWQPPALPILTWPVLQART
GLVYDQRMMGHYNLWDNYHPEMPQRVFRIMRRLEELGLAGRCLTLPTRPATDAELLTCHS
AEYVGRLRATAKMKTRELHREGSNFDSIYICPGTFACAQLATGATCRLVEAVLAGEVLNG
AAVVRPPGHHAERDAACGFCFFNSVAVAARHAQAISGHALRILIVDWDVHHGNGTQHIFE
EDPSVLYISLHRYDHGTFFPMGDEGASSQMGRAAGTGFTVNVAWNGPRVGDADYLAAWHR
LVLPIAYEFNPELVLVSAGFDAARGDPLGGCQVSPEGYAHLTHLLMGLANGRIILILEGG
YNLTSISESMAACTRSLLGDPPPLLTLARPPLSGALASITETIQVHRRYWRSLRVMKVED
KEGPSSSKSITRKVTPPAHRGSAVRMTAPDGNILDADTGKATSASSVEVSTPDQAKSETA
VVALNQDQASDAPTREAMLDKTPSEAATEGATLDQTIVGTATVGATPGQTTSEEAVGGAE
VIQTPPALRTDSQTPPASSVQGATAQISPSKLTESLGTLDLNSEAQKAPESQSPEEERLL
GEAAEGQHRDHSMLIQSFGDHAVGDQVAFYAVTPLPWCPHLVAVGPIPESGLDVTQPCQD
CGTLRENWVCLSCYQVYCGRYVSAHMLQHHGVSGHPLVLSYVDLSTWCYDCEAYVHHQAL
LDVKSLAHQNKFGEDMPHSH
NT seq
3483 nt
NT seq
+upstream
nt +downstream
nt
atgacctccaccggccaggattccaccacaaccaggcagcgaaggagtaggcataacccc
cattcgcccccccacgactccagcgtcacctcgaagcgaggtgttaagaagggtgcctta
ctccactccagccctagtctagcagaggtaaagaagaaaggcagaatgaagaagctcagc
caagcagcagagcaagacctcatcgtgggcctgcaaggactggatctgaaccttgaggcc
aagacactgtctgggactggtttggtgttcgatgagcagctaaatgaattccactgcctc
tgggatgacagcttccctgaatgccctgagcggctccatgccatcaaggaacagctgatc
caggagggccttgtggaccgctgcgtgtccttccaggctcgctttgctgaaaaggaggag
ctgatgttggttcacagcctggaatacattgacctgatggagacgacccagtacatgaat
gagggagagctccgcatcctagcagacacctatgactcagtttacctgcatccgaactca
tatacctgtgcctgcctggcctcgggctctgtcctcaggctggtggatgcggtcctggga
aatgagatccggaatggcatggccatcatcaggcctccaggacaccacgcccagcacagt
cttatggatggatattgcatgttcaaccacgtggctgtggccgcccgctatgctcaaaag
aagcatgccattcagagggttcttatcgtggattgggatgtgcaccatggtcaaggaaca
cagtttgcctttgaccaggaccccagtgtcctctatttctccatccaccgctacgagcag
ggtaggttctggccccacctgaaggcctctaactggtccaccataggttttggccgaggc
cagggatataccatcaatgtgccttggaaccaggtggggatgcgcgatgccgactacatt
gccgctttcctgcacctccttctgccagtcgcccttgagttccagccccagctggtcctg
gtggctgctggatttgacgccctccaaggggaccccaagggtgagatggccgccactccg
gcaggactcgctcagctaacgcacctgctcatgggtctggcaggcggcaagctgatcctg
tctctggagggtggctacaacttccgctccctggctgagggcgtcagtgcctcactccac
acccttctgggagacccttgccccatactggagtctcctggtgccccgtgccggagtgcc
caggcgtcactgtcctgcgctctggaagccctggagcccttctgggaggtccttgtaaga
tcagctgagaccctggaggaggacttcttggaggaggagaatgtggagaaggaagaagaa
ggaccgtggcagcccccggcgctcccaatcctgacgtggcccgtgctacaggctcgcaca
gggctggtctatgaccagcggatgatgggtcactacaacttgtgggacaactaccaccca
gagatgcctcagcgagtctttcggatcatgcgccgtttggaagaactgggccttgcaggg
cgctgcctcaccttgcccacacgtcccgccacggacgccgaactgctcacctgccacagt
gctgagtacgtgggtcgtctgcgggccacagcgaagatgaaaacgcgcgagctgcaccgc
gagggctccaactttgactccatctacatctgccccggcacctttgcctgtgcccagctg
gccactggcgccacctgccgcctggtggaggccgtgctggccggagaggttttgaatggc
gccgctgtggtgcgtcccccaggacaccatgcggagcgggatgccgcgtgcgggttttgc
tttttcaactctgtggctgtggctgcacgccatgcccaagccatcagtgggcatgcgctg
cggatcctcatagtggactgggacgtccatcacggtaatggaactcagcacatatttgag
gaagaccccagcgtgctgtacatctccctgcaccggtatgatcacggcaccttctttccc
atgggggatgagggcgccagcagccagatgggccgggccgcaggcaccggcttcactgtc
aatgtggcctggaacgggccccgcgtgggtgacgctgactacctggctgcctggcatcgt
ctggtgctccccattgcctacgagtttaacccagaactggtgctggtctcggctggcttt
gacgccgcacggggggacccgctggggggctgccaggtgtcacccgagggctatgcccac
ctcacccacctgctgatgggccttgccaatggccgcatcatcctaatcctagagggtggc
tacaacctgacctccatctcggagtccatggctgcctgcacccgttccctccttggggac
ccaccaccactgctaaccctggcgcggcccccgctgtcaggggccctggcctccatcacc
gagaccatccaagtccatcgcagatactggcgcagcttgcgggtcatgaaggtcgaagac
aaggagggaccttccagttctaagtcaatcaccaggaaggtgaccccgccagcccaccgt
gggtcagctgtgcggatgaccgcaccagacgggaacattctagatgcggacacagggaag
gctacctcagcatcatccgtggaagtgtccaccccagaccaagctaagtcagagactgca
gtggtggcactcaatcaggaccaagcctcagacgctcccaccagggaagccatgctggac
aagaccccctcagaggcagccacagaaggagccacgctggaccagaccatcgtggggaca
gccacagttggagccacgccaggccagaccacctcagaggaagctgtcgggggagctgag
gtgatccaaacccctccagccttacgtactgacagccagactcccccagcctcatctgtg
caaggagccacagcccagatatcccccagtaagctgactgagagtctcgggaccttggac
ctgaacagcgaggctcagaaggcaccagaatctcagagcccagaagaggagagactgcta
ggagaggcagctgaaggtcagcacagggatcattccatgctgattcagagctttggggac
catgccgtcggtgaccaggtcgcgttttatgcggtgacaccactgccctggtgtccccat
ttggtggcagtaggtcccatacctgaatcgggcctggacgtgacccaaccttgtcaggac
tgtggaacactccgggagaactgggtgtgtctgtcctgctatcaggtctactgcggccgt
tacgtcagtgcgcatatgctgcagcaccacggcgtctcaggacacccgctggtcctcagc
tacgtcgacctgtctacctggtgttacgactgtgaggcctatgtccaccaccaggctctc
ctggatgtgaagagcctcgctcaccagaacaagtttggggaggacatgccccactcgcac
taa
DBGET
integrated database retrieval system
