Ursus americanus (American black bear): 123790972 Help Entry 123790972         CDS       T07931                                  Symbol SKIV2L Name (RefSeq) helicase SKI2W   KO K12599   antiviral helicase SKI2 [EC:5.6.2.6] Organism uar  Ursus americanus (American black bear) Pathway uar03018   RNA degradation Brite KEGG Orthology (KO) [BR:uar00001]  09120 Genetic Information Processing   09123 Folding, sorting and degradation    03018 RNA degradation     123790972 (SKIV2L)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:uar03019]     123790972 (SKIV2L) Enzymes [BR:uar01000]  5. Isomerases   5.6  Isomerases altering macromolecular conformation    5.6.2  Enzymes altering nucleic acid conformation     5.6.2.6  RNA 3'-5' helicase      123790972 (SKIV2L) Messenger RNA biogenesis [BR:uar03019]  Eukaryotic type   mRNA surveillance and transport factors    Transport factors     eIF4F and regulatory proteins      123790972 (SKIV2L)   mRNA degradation factors    3'-5' decay     Ski complex      123790972 (SKIV2L) BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  DSHCT Ski2_N MTR4_beta-barrel DEAD MTR4-like_stalk DEXQc_Suv3 Helicase_C ResIII HAS-barrel DUF3516 Motif Other DBs NCBI-GeneID:  123790972 NCBI-ProteinID:  XP_045651557 LinkDB All DBs Position Unknown AA seq 1246 aa AA seqDB search MMETERLVLPPPDPLDLPLRPVELGCTGRWELLNVPGAPESTLPHGLPPCAPDLRQEAEH LFLSSPAWLPLHGVEHSARKWQRKMDPWSLLATQGAPVPSDLQAQRHPTTGQILGYKEVL LENTNLSATTSLSLHRPPGPISQSLWGNPTQYPFWPGGMDEPTITDLSTREEAEEEIDFE QDLLTVPPGFKKGVDFAPKDHPAPAPGLLSLSRLLEPLDLGGGDEDESEAVRQPGIPRGD TVSASPCSASLARASSLEDLVLKEASTAVSPPEPPKPLPQEQWAIPVDVTSPVGDFYRLI PQPAFQWAFEPDVFQKQAILHLERHDSVFVAAHTSAGKTVVAEYAIALAQKHMTRTIYTS PIKALSNQKFRDFRNTFGDVGLLTGDVQLHPEASCLIMTTEILRSMLYSGSDVIRDLEWV IFDEVHYINDAERGVVWEEVLIMLPDHVSIILLSATVPNALEFADWIGRLKRRQIYVIST VARPVPLEHYLFTGNSPKTQGELFLLLDSRGAFHTKGYYAAVEAKKERMSKHAQTFGAKQ PTHQGGPAQDRGVYLSLLASLRTRAQLPVVVFTFSRGRCDEQASGLTSLDLTTSSEKSEI HLFLQRCLARLRGSDRQLPQVLHMSELLHRGLGVHHSGILPILKEIVEMLFSRGLVKVLF ATETFAMGVNMPARTVVFDSMRKHDGSTFRDLLPGEYVQMAGRAGRRGLDPTGTVILLCK GRVPEMADLHRMMMGKPSQLQSQFRLTYTMILNLLRVDALRVEDMMKRSFSEFPSRKDSK AHEQALAELTKRLGALEEPDTTGQLVDLPEYYSWGEELTETRSLIQRRIMESVNGLKSLS AGRVVVVKNQEYHNTLGVILQVSSNSTSRIFTTLVLCDKPTSEDPQERAPATPDVPYPDD LVGFKLFLPEGPCDHTVAKLQPGDVAAITTKVLRVNGEKILEDFSKRQQPKFKKDPPIAA VTTAVQELLRLAQAHPAGPPTLDPVNDLQLKDVSVVEGGLRARKLEELIWGAQCVHSPRF SAQYLKLQERMQIQKEMERLRFLLSDQSLLLLPEYHQRVEVLRTLGYVDEAGTVKLAGRV ACAMSSHELLLTELMFDNALSALRPEEIAALLSGLVCQSPGDPGEQLPSTLKQGVERVRA VAKRIGEVQVACGLNQTVEEFVGELNFGLVEVVYEWARGMPFSELAGLSGTPEGLVVRCI QRLAEMCRSLRGAARLVGEPVLGAKMETAATLLRRDIVFAASLYTQ NT seq 3741 nt NT seq  +upstreamnt  +downstreamnt atgatggagaccgagcgactcgtgctacctcctccagaccccctggatctgccccttcgg ccggtggagctgggatgcactgggcgctgggagctgctgaatgtgcctggggctccagag agcacccttccccacggcctccctccctgtgccccagatctgcggcaggaagcagaacac ttgtttttgtcatctccagcctggttgcctctgcatggtgtggaacactctgcccgaaaa tggcagaggaaaatggatccctggtctctcctggccacacagggggccccagtgccctcc gaccttcaggcccaaagacacccaaccacaggccagattctgggctacaaagaggtcctg ctagagaatacaaacctgtcggccaccacctccttgtctcttcaccggcccccagggccc atctcccagtccctgtgggggaatccaacacagtaccctttctggccaggtggaatggat gagcccaccataacagatctcagtactcgggaggaggctgaggaggagatagactttgag caagatcttcttactgttccacctggcttcaagaaaggtgtggactttgcaccaaaggat cacccagctccagctcccggcttgctcagcctcagccgtttgctggaacctctggatttg ggtgggggagatgaggatgagagtgaggcagtgcgacagccaggaattcccagaggggac actgtttccgcctccccctgcagtgcttccctggcccgagcaagcagcttggaggaccta gtgttgaaggaagcatccacagctgtatctcctccagagccccccaaacccctgcctcag gagcagtgggcgattcctgtggatgtcacctctcctgttggtgatttctaccgcctcatt ccccagccggccttccagtgggcatttgagccggatgtgttccagaagcaggccatcctg catttggagcggcatgactctgtttttgttgcggctcacacatctgcagggaagacggtt gtggctgaatacgccattgctcttgcccagaaacacatgacgcgcaccatttacacatcg cccatcaaggccctcagcaaccagaagttccgagactttcgaaacacattcggggatgtg ggattgctcactggggatgtacagctgcacccagaggcctcctgtctcattatgacaaca gagatccttcgctccatgctctacagtggctcagatgtcatccgggacctggagtgggtc atctttgatgaagttcactacatcaatgatgctgagcgtggggttgtgtgggaggaagtg ctcatcatgctgcctgaccacgtgtccatcatccttctgagtgctactgtccccaacgcc ctcgagttcgccgactggatcgggcgactgaaacgtcgccagatctatgtgatcagcacc gttgcacgccccgttcccctggagcattatctcttcacggggaacagccccaagacccag ggggagctctttctgttgctggactcccgaggcgccttccacacaaaggggtactatgca gctgtggaggccaagaaggagcggatgagcaaacacgcccagacctttggggccaaacag cccacgcatcagggggggcctgcacaggaccgcggtgtgtacctatccctcctggcctcc ctccgcacccgtgcgcagctgcccgtggtggtgttcactttctcccggggtcgctgtgat gagcaagcctcgggcctcacctcccttgatctcaccacaagttcagaaaagagtgagatt cacctcttcctgcagcgctgccttgctcgcctccgtggctctgaccgccagctgccccag gtcctgcacatgtccgagcttctgcaccgtggcctgggagtgcaccacagtggcatcctg cctattcttaaagagatcgtggagatgctcttcagtagaggcctggttaaggtcttgttt gccacagagacctttgccatgggtgtaaatatgcctgcccgaacggtggtgtttgactcc atgcggaagcacgatggctccaccttccgggatctgctccctggagagtacgtgcagatg gcaggccgggcaggccggaggggcctggaccccacaggcaccgtcatcctgctctgcaag ggccgtgtgcctgagatggcagacctgcaccgtatgatgatggggaagccgtcacagctg cagtcccagttccgactcacgtacaccatgatcctgaacctgctgcgggtggacgccctc agggtggaggacatgatgaagaggagcttctccgagtttccatcccgcaaggacagcaag gcccatgaacaggctctagctgaactgaccaagagactgggggccttggaggaacctgac acaactggccaactggttgacctgcctgagtattacagctggggggaggaactgacagag acccggagcctgatccagcgacgcatcatggagtctgtgaatgggctcaagtctctctca gcaggaagggtagtggttgtgaagaatcaggagtatcacaacacactgggtgtgatcttg caggtctcctcgaactccacaagcaggatatttacaaccctggtcttgtgtgataagcct acgtctgaggacccacaggagagggcaccagccaccccagatgtgccctaccccgatgat cttgtgggattcaaactgttcctgcctgaagggccctgtgaccacacagtggccaagctc cagccaggagatgtggccgccatcaccaccaaggtgctccgggtgaatggggagaagatc ttagaggacttcagcaagaggcagcaaccaaaattcaagaaggatcctcccattgcagcc gtgaccactgctgtgcaggaacttctgcgtttggctcaggcccacccagcgggtccccct acccttgaccctgtcaatgacctgcagctcaaggatgtgtcagtggtggagggggggctc cgggcccggaagctggaggagctgatctggggggctcagtgtgtgcacagcccccgtttc tctgcccagtacctgaagctgcaggagcgaatgcaaatacagaaggagatggagcgacta cgcttcctgctgtcagatcagtcactgctgctgcttccggagtatcaccagcgagtagag gtgctccgaaccctgggttatgtagatgaagcgggcactgtgaagctggcggggcgggtg gcttgtgccatgagcagccatgaactactcctcactgagctcatgtttgacaacgctctg agtgccctgcggccagaggagattgcggccctgctctccggcctggtctgccagagccct ggggaccctggagagcagctcccaagcactctcaaacagggagtggaacgtgtccgggct gtggccaagcggattggtgaggtccaggtggcctgtggcctgaaccagacagtggaggaa tttgtgggggagctgaattttgggctcgtcgaggttgtgtacgagtgggcccggggcatg cccttctccgagctggcggggctgtcggggacccctgagggcctggtggtccgctgcatc cagcgcctggccgagatgtgtcgctcactgaggggggcagctcgtctcgtaggcgagcct gtgctaggtgccaagatggagacggcggctaccctgctacggagggacatcgtctttgct gccagcctgtacactcagtga

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