Ursus americanus (American black bear): 123791036
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Entry
123791036 CDS
T07931
Symbol
CDKAL1
Name
(RefSeq) threonylcarbamoyladenosine tRNA methylthiotransferase isoform X1
KO
K15865
threonylcarbamoyladenosine tRNA methylthiotransferase CDKAL1 [EC:
2.8.4.5
]
Organism
uar
Ursus americanus (American black bear)
Brite
KEGG Orthology (KO) [BR:
uar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
uar03016
]
123791036 (CDKAL1)
Enzymes [BR:
uar01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.5 tRNA (N6-L-threonylcarbamoyladenosine37-C2)-methylthiotransferase
123791036 (CDKAL1)
Transfer RNA biogenesis [BR:
uar03016
]
Eukaryotic type
tRNA modification factors
Methylthiotransferase
123791036 (CDKAL1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM
Motif
Other DBs
NCBI-GeneID:
123791036
NCBI-ProteinID:
XP_045651675
LinkDB
All DBs
Position
Unknown
AA seq
632 aa
AA seq
DB search
MSWRAPYEVFPVSAERRVVLSLWADFPEDLRLIADSQEKMPSASCDTLLDDIEDIVLQGD
LKPQDRHSARKHVVPKARKRNTQKYLQEENSPPSDSTIPGIQKIWMRTWGCSHNNSDGEY
MAGQLAAYGYEITENASDADLWLLNSCTVKNPAEDHFRNSIKKAQEENKKIVLAGCVPQA
QPRQDYLKGLSIIGVQQIDRVVEVVEETIKGHSVRLLGQKKDNGKRLGGARLDLPKIRKN
PLIEIISINTGCLNACTYCKTKHARGNLASYSIDELVERAKQSFQEGVCEIWLTSEDTGA
YGRDIGTSLPALLWKLVEVIPEGAMLRLGMTNPPYISEHLEEMAKILNHPRVYAFLHIPV
QSASDTVLMEMKREYCVADFKRVVDFLKEKVPGITLATDIICGFPGETDQDFQETVKLVE
EYKFPSLFINQFYPRPGTPAAKMAQVPAQVKKQRTKDLSRVFHSYNPYDHKIGERQQVLV
TEESFDSKFYVAHNRFYEQVLVPKNPTFMGKMIEVDIYESGKHFMKGQPVSDAKVYTPSI
NKPLAKGEVSGLTEVCDTEWKVWMRIAHFDWRYLVDWPGGSLDSEASFCSSYVYLGLFCP
CTHHLCISRGPAPTGAQQNNLEKCTRALPSAS
NT seq
1899 nt
NT seq
+upstream
nt +downstream
nt
atgtcatggcgagctccatatgaagtgtttcccgtatcggcagaacggcgtgtggttctc
tcactttgggctgactttccagaggatttgagactaattgcagatagtcaagagaagatg
ccttctgcgtcctgcgacacactactggatgacatagaagatatcgtgttacagggagac
ttaaagccacaagataggcattctgcacgaaagcatgtagttccaaaggcacgaaagcga
aacacccaaaaatatttgcaagaggaaaacagtccaccaagtgatagcaccattccaggc
atacagaaaatttggatgagaacgtggggttgttctcataataattcggatggagaatac
atggctggacaactagctgcttatggatatgaaattacagaaaatgcatcagacgcagat
ttatggctcctgaatagttgtactgtaaaaaacccagccgaagaccactttagaaactca
attaaaaaagctcaagaggagaataagaagatagtgctagctggatgtgttcctcaagcc
cagcctcgacaggactaccttaaaggactgagtatcataggggttcaacagatagatcga
gtggtagaagttgtggaagaaacaattaaaggtcactctgtgagactgctgggtcagaaa
aaggataatggaaagcgcttgggtggagcgcgattggatttgccaaagatcaggaagaat
cccctgatagaaatcatttccatcaatactgggtgtctcaacgcttgtacctactgcaaa
actaaacacgccagaggaaatttggccagttactcaattgacgaactagtagaaagagcc
aaacagtcttttcaagagggtgtttgtgagatatggttgaccagtgaagacacaggggct
tacggcagagacattggcaccagtctccccgcactgctgtggaaactggttgaagtgatt
cctgagggagcgatgctgaggcttggcatgacaaatccaccctatatttcagagcatctg
gaggaaatggcaaaaatccttaatcatcccagagtctacgcttttctgcacatcccagtc
cagtctgcctccgacactgtactcatggaaatgaaaagggaatactgcgtggctgacttc
aaaagagtagtggattttctgaaagagaaagttcctggaataactcttgctacagatatc
atctgtggttttcctggagaaacagatcaggattttcaagaaacagtgaaacttgtggaa
gagtacaaatttccaagcctgtttattaaccagttttacccaagaccaggaactcctgct
gcaaaaatggcacaagttccagcacaagtgaaaaagcaaagaacgaaagatctttctcgg
gtattccattcttacaatccgtacgatcacaagattggcgaaagacaacaagtgttagtg
acagaagaatcttttgattccaagttttatgttgcccacaatcgattctacgagcaggtt
ttagtgccaaagaaccccacattcatggggaaaatgatcgaagtggacatttatgaatca
ggcaaacattttatgaaagggcagccagtatcagatgccaaagtatacacgccgtccatc
aacaaaccattagcaaagggagaagtctcaggtttaacggaggtgtgcgatacagagtgg
aaagtatggatgcggattgctcattttgactggagatacctcgttgactggcctggaggc
tctttggattctgaagcctcgttctgcagttcgtatgtctatttaggtttgttctgcccc
tgcacacatcacttatgtatctctagagggccagcgccgactggagctcagcagaacaac
ttggagaaatgcacccgtgcactcccatcagcttcgtga
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