Ursus americanus (American black bear): 123792789
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Entry
123792789 CDS
T07931
Symbol
TRIM71
Name
(RefSeq) E3 ubiquitin-protein ligase TRIM71
KO
K12035
tripartite motif-containing protein 71 [EC:
2.3.2.27
]
Organism
uar
Ursus americanus (American black bear)
Pathway
uar05206
MicroRNAs in cancer
Brite
KEGG Orthology (KO) [BR:
uar00001
]
09160 Human Diseases
09161 Cancer: overview
05206 MicroRNAs in cancer
123792789 (TRIM71)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
uar03019
]
123792789 (TRIM71)
04121 Ubiquitin system [BR:
uar04121
]
123792789 (TRIM71)
Enzymes [BR:
uar01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
123792789 (TRIM71)
Messenger RNA biogenesis [BR:
uar03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
123792789 (TRIM71)
Ubiquitin system [BR:
uar04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
123792789 (TRIM71)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NHL
Filamin
DUF5128
zf-B_box
SGL
ANCHR-like_BBOX
zf-C3HC4
zf-RING_5
zf-RING_UBOX
COG5_N
Motif
Other DBs
NCBI-GeneID:
123792789
NCBI-ProteinID:
XP_045654092
LinkDB
All DBs
Position
Unknown
AA seq
869 aa
AA seq
DB search
MASFPETDFQICLLCKEMCGSPAPLSSNSSASSSSSQTSTSSGGGGGGPGAAARRLHVLP
CLHAFCRPCLEAHRLPAAGSSAPGEPLKLRCPVCDQKVVLAEAAGMDALPSSAFLLSNLL
DAVVATADEPPPKNGRAGAPAGAGGHSNHRHHAHHAHPRASASAQPPLPPAPPPPAPSRS
APGGPAASPSALLLRRPHGCSSCDEGNAASSRCLDCQEHLCDNCVRAHQRVRLTKDHYIE
RGLPGPAAAAAAQQLGLGPPFPGAPFSILSVFPERLGFCQHHDDEVLHLYCDTCSVPICR
ECTMGRHGGHSFIYLQEALQDSRALTIQLLADAQQGRQAIQLSIEQAQTVAEQVEMKAKV
VQSEVKAVTARHKKALEERECELLWKVEKIRQVKAKSLYLQVEKLRQSLSKLESTISAVQ
QVLEEGRALDVLLARDRMLAQVQELKTVRSFLQPQEDDRVMFTPPDQALYLAIKSFGFVS
SGAFAPLTKATGDGLKRALQGKVASFTVIGYDHDGEPRLSGGDLMSAVVLGPDGNLFGAE
VSDQQNGTYVVSYRPQLEGEHLVSVTMCNQHIENSPFKVVVKSGRSYVGIGLPGLSFGSE
GDGDGKLCRPWGVSVDKEGYIVVADRSNNRIQVFKPCGAFHHKFGTLGSRPGQFDRPAGV
ACDASRRIVVADKDNHRIQVFTFEGQFLLKFGEKGTKNGQFNYPWDVAVNSEGKILVSDT
RNHRIQLFGPDGVFLNKYGFEGALWKHFDSPRGVAFNPEGHLVVTDFNNHRLLVIHPDCQ
SARFLGSEGTGNGQFLRPQGVAVDQEGRIIVADSRNHRVQMFESNGSFLCKFGAQGSGFG
QMDRPSGIAVTPDGMIVVVDFGNNRILIF
NT seq
2610 nt
NT seq
+upstream
nt +downstream
nt
atggcttcgttccccgagaccgacttccagatctgcctgttgtgcaaggagatgtgcggc
tcgccggcgccgctctcctccaactcatctgcatcgtcgtcgtcctcgcagacgtccacg
tcgtcgggtggcggcggcgggggtccgggggccgcggcgcgccgcctgcacgtcctgccc
tgcctgcacgccttctgccgcccgtgcctcgaggcgcaccggctgccggcggctggcagc
agcgctccgggagagccactcaagctgcgctgccccgtgtgcgaccagaaagtagtgctg
gccgaggcggcgggcatggatgcgcttccctcgtccgccttcctactcagcaacctgctc
gacgccgtggtggccacggccgacgagccgccgcccaagaacgggcgtgccggagccccg
gcgggcgcaggcggccacagcaaccaccggcaccacgcgcaccacgcgcacccgcgcgcg
tccgcctcggcccagccgccactcccgccggcgccgccaccgcccgcgccttcccgctct
gcgccgggcggcccggcggcctctccgtctgcgctgctgctgcgccggcctcacggctgc
agctcctgcgacgagggcaacgcggcctcgtcgcgctgcctggactgccaggagcacctg
tgcgacaactgcgtccgcgcgcaccagcgcgtgcgcctcactaaggaccactacatcgag
cgcggcctgccaggtcccgcggccgcggccgcggcgcagcagctcgggctcgggccaccc
ttccccggcgcgcccttctccatcctgtcggtgttccccgagcgcctcggtttctgccag
caccacgacgatgaggtgctgcacctgtactgtgacacttgctcggtgcccatctgtcgt
gagtgcacgatgggcaggcatgggggccacagcttcatctacctccaggaggcgctgcag
gactcgcgggcacttaccatccagctgctggccgatgcgcagcagggccgccaggcaatc
cagctgagcatcgagcaggcccagacggtggcggagcaggtggagatgaaggcaaaggtg
gtacagtcggaggtcaaagccgtgacggcaaggcacaagaaggccctggaggagcgggag
tgcgagctgctgtggaaggtggagaagatccgccaggtgaaagccaagtccctgtacctg
caggtggagaagctgcggcagagcctcagcaagctcgagagcaccatcagtgccgtccag
caggtcctggaagagggccgggcgctggatgtcctgctggcccgggaccgcatgctggcc
caggtgcaggagctgaagaccgtgcgcagcttcctgcagccccaggaagatgaccgcgtc
atgttcacgccccccgaccaggccctgtacctcgccatcaagtccttcggcttcgtcagc
agcggggcctttgcgcctctcaccaaggccacgggcgacggcctcaagcgggccctccag
ggtaaggtggcctcctttaccgttattggctacgaccacgatggggagcctcgcctctcg
gggggcgacctgatgtcagccgtggtcctgggccctgacggcaacctgtttggtgccgag
gtgagcgaccagcagaacgggacgtacgtggtgagctaccggccgcagctggagggcgag
cacctggtgtcggtcaccatgtgcaaccagcacatcgagaacagccccttcaaggtggtg
gtcaagtcgggccgcagctacgtgggcatcgggctcccgggcctgagctttggcagcgag
ggtgacggtgacggcaagctctgccgcccgtggggcgtgagtgtggacaaggagggctac
atcgtcgtggccgaccgcagcaacaaccgcatccaagtgttcaagccgtgtggcgccttc
caccacaaatttggcaccctgggctcccggcccgggcagttcgaccggccggccggcgtg
gcctgcgacgcctcccgcaggattgtggtggccgacaaggacaatcatcgcatccaggtc
ttcacattcgagggccagttcctgctcaagtttggtgagaagggaaccaaaaacgggcag
ttcaactacccttgggacgtggcggtgaactctgagggcaagatcctggtctctgacacc
cgcaaccaccggatccagctgttcgggcccgacggcgtcttcctgaataagtacggcttc
gagggggctctctggaagcactttgactccccccggggcgtggccttcaacccggagggc
cacttggtggtcaccgacttcaacaaccaccggctcctggtcatccaccccgactgccag
tccgcgcgcttcctgggctccgagggcaccggcaacgggcagttcctgcgcccacaggga
gtggccgtggaccaggaggggcgcatcatcgtggccgactccaggaaccaccgggtgcag
atgttcgagtccaacggcagcttcctgtgcaagtttggcgcccaaggcagtgggtttggg
cagatggaccgcccgtctggcatcgcggtgacccccgatgggatgatcgtggtggtggat
ttcggcaacaatcggatcctcatcttctaa
DBGET
integrated database retrieval system
