Ursus americanus (American black bear): 123792827
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Entry
123792827 CDS
T07931
Symbol
SCN11A
Name
(RefSeq) sodium channel protein type 11 subunit alpha
KO
K04843
voltage-gated sodium channel type XI alpha
Organism
uar
Ursus americanus (American black bear)
Brite
KEGG Orthology (KO) [BR:
uar00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
uar04040
]
123792827 (SCN11A)
Ion channels [BR:
uar04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
123792827 (SCN11A)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
Na_trans_assoc
PKD_channel
IQ_SCN5A_C
GPHH
Motif
Other DBs
NCBI-GeneID:
123792827
NCBI-ProteinID:
XP_045654174
LinkDB
All DBs
Position
Unknown
AA seq
1770 aa
AA seq
DB search
MDDRCYPVIFPDERNFRPFTSDTLAAIEKRIAIQNEKKKCKDQTTAEPQPRPQLDLKVSR
KLPKLYGDIPHELIAMPLEDLDPFYRNHKTFMVLNKKRTIYRFSAKRALFIFGPFNPIRS
LAIKISVHSLFSMFIICTVIINCVFMASAFWKENSNTDTDNAEYVFTGIYIFEALIKILA
RGFILDEFSFLRDPWNWLDSIVIVTAFATYVPEVRESGFSLSSLRTFRVFRALKAISVVS
GLKVIVGALLRSVKKLVDVMILTLFCLSIFALVGQQLFMGSLNQRCIHNDCKNMDNPDDN
CFEKKNSSEFRMCGTWMGNSACSENFQCKHTKRNPDYNYTNFDNFGWSFLAMFRLMTQDS
WEKLYQQTLRASGLYSVFFFVVVIFLGSFYLINLTLAVVTMAYEEQNRNVAAETEAKEKM
FQEAQRLLKEEKEALVAMGIDRSSLNSLEASSFSPKKRKLFGKRKRKSFFLRDSGKDQPP
GSDSDEDSTKKPHILEQTKRLSQNLSVDYFDEHGDPFQRQRALSAVSILTITMQEQEKSQ
EPCLPCGGNLASRYLVWNCSPQWLCIKKALRTVMTDPFTELAITICIIINTIFLAMDHYN
MDQSFESMLYIGNLVFAGIFMAEMCLKIIALDPYNYFRRGWNIFDSIVALLSFADVMNSI
VVGKKSLLFFRPLRVLRVFKLAKSWPTLNTLIKIIGHSVGALGNLTVVLAIVVFIFSVVG
TQVFGSKFNSVRSNKTSCGPTVPCLRRWHMGDFYHSFLVVFRILCGEWIENMWECMQETN
QALCIVVFLLIMVIGKLVVLNLFIALLLNSFSNEERDGNLDGESKKTKVQLALDRFHRAF
CFVIHTLQHFCHKWCRSRNLPRQKEVTGGPAAKSKDIIPLVTEMKKGPEMREEHDRTWLA
PLAEEEDGFESSGENNAQHVTQPEAGKQAFELHQTTKKSISPGTQSVEIDVFSEDDICLS
EQDPQKKCDTTSVLSECSTIDPQDPFGLVPEMVPKKEPERCFPKGLGHCFPCCAIDKRKS
PGLIWWNLRKTCYQIVKHSWFESFIIFVILLSSGALVFEDVHLEERPNIQALLNCTDHIF
TYIFILEMGLKWVAFGFGKYFTSVWCWLDFVIVIVSVTSLIDLKSLKSFRTLRALRPLRA
LSQFEGMKVVVNALIGAIPAILNVLLVCLIFWLIFCILGVNFFSGNFGRCINRTDINSVI
NYNTVASKTQCESGNLSWVILPVNFDNVGMAYLALLQVATFKGWMDIMYAAVDSRGKELQ
PGFEEQPVNYLFFVAFIIFGSFFTLNLFIGVIIDNFNQQQKKISGEDIFMTEEQKKYYNA
MKKLGSKKPQKPIPRPLNKCQGLMFDLVTSQVFDIIIIILIFLNMLSMMAESNDQPEATK
IILERLNLAFVVIFTIECLIKILALRQYYFTIGWNLFDCVIVVLSIVSTMVSALENQEHI
PFPPTLFRIVRLARIGRILRLVRAARGIRTLLFALMMSLPSLFNIGLLLFLVMFIYAIFG
MSCFCRVKEEHGIDDIFNFKTFVGSILCLFQITTSAGWDALLKPMLQSKDSCNPNLDSRH
LPAIAITYFVSYIIISFLIVVNMYIAVILENFNTATEESEDPLGEDDFEIFYEVWEKFDP
EATQFIKYSVLSDFADALPEPLRVAKPNKFQFLMMDLPMVSGDRLHCLDILFAFTTRVLG
DSDGLDSMKVMMEEKFMEANPSKKLYEPIVTTTKRKEEERCAAVIQKAFRKYRLKMSTGA
LEDRPHSPLQTLCNGDLSSSGVTEGKVHYD
NT seq
5313 nt
NT seq
+upstream
nt +downstream
nt
atggatgacaggtgctacccagtgatctttccagatgagcggaatttccgtcccttcact
tccgacactctggctgcaattgagaagaggattgccatccaaaatgagaaaaagaagtgc
aaagaccagacaacagcagaaccccagcctcggcctcagcttgacctaaaggtctccagg
aagttgcccaaactctatggtgacattccccatgagctgatagcaatgcccctggaagac
ttggacccattctacagaaatcataagacatttatggtgttgaacaaaaagagaacaatc
taccgcttcagtgccaagcgtgccttgttcatttttgggcctttcaatccaatccgaagt
ttagccatcaaaatctcggtccattcattgttcagtatgttcatcatctgcaccgtcatc
attaactgtgtgttcatggcctctgccttctggaaggaaaacagtaatacagataccgac
aatgctgagtatgtcttcactgggatttatatttttgaagctttgataaaaatattggca
agaggttttattctggatgagttttcttttcttcgagatccatggaactggctggactcc
attgtcattgtaacagcgtttgcaacatacgtaccagaagtcagggaaagcggcttcagt
ctgtcatccctgcgtaccttccgagtgttcagagctttaaaagcaatttcagtggtttcg
ggtctgaaggtcattgttggggccttgctgcgctctgtgaagaagcttgttgacgtgatg
atcctgaccctcttttgcctcagcatcttcgccctggtaggtcagcagctcttcatggga
agtctgaaccagagatgtatccataatgactgtaagaatatggataaccctgatgataat
tgctttgaaaagaaaaattcctctgaattcagaatgtgtggcacctggatgggtaacagt
gcctgttctgaaaattttcaatgcaaacacaccaaaaggaatcctgactataattatacc
aattttgacaactttggttggtcttttcttgccatgtttcggcttatgacccaagattcc
tgggagaaactttatcaacagaccttgcgtgcctcagggctctactcagtcttcttcttt
gtggtggtcatcttcctgggttctttctatctgattaacttaaccctggctgttgtcacc
atggcttatgaggaacagaacagaaatgtagctgctgagacagaggccaaggagaagatg
ttccaggaagcccagcggctgctgaaggaggagaaggaggctctggttgccatgggaatt
gatagaagttcacttaattcccttgaagcatcatctttttccccaaagaagagaaagctt
tttggtaaaaggaaaagaaagtccttttttttgagagactctgggaaggaccagcctcca
ggatcggattctgatgaagattccacaaaaaagccacacatcctagagcaaaccaaacga
ctatcccagaatctgtcagtggattactttgatgagcacggagaccccttccaaagacag
agggccctgagtgctgtcagcattctcaccatcaccatgcaggaacaagaaaaatcacag
gagccttgcctcccatgtgggggaaacctggcatccagatacctcgtgtggaactgtagc
ccccagtggctgtgcattaagaaggccctaagaaccgtaatgactgacccgtttactgag
ctggccatcaccatctgcatcatcatcaacactatcttcttggccatggatcattacaac
atggaccagagttttgagtctatgttgtatatagggaatttggttttcgctggcattttc
atggcagaaatgtgcctaaaaattattgcgcttgatccctacaactactttcgccgaggc
tggaacatttttgacagcatcgttgctcttctgagttttgcagatgtgatgaacagtata
gttgtagggaaaaaaagtctgctgtttttccgtcccttaagagtgctgagggtcttcaag
ttagccaaatcctggccaactttgaacacattgataaagataattggccactccgttgga
gccctgggaaacctgactgtggtcttggctattgtggtctttattttctcagtggttggc
acgcaggtttttggctctaaattcaattctgtgaggagcaataaaacatcctgtggccct
acagtcccatgtttacgacgctggcatatgggggatttctaccattcctttctggtggta
ttccgcatcctctgtggggaatggattgaaaacatgtgggaatgtatgcaagaaacaaat
caagcactgtgcattgttgtctttctgttgatcatggtgataggaaaacttgtggtactc
aacctcttcattgccttgctgctcaattccttcagtaatgaggagagagatggaaacttg
gatggagagtccaaaaaaaccaaagtccagttagccctggatcggttccaccgggctttt
tgctttgtaatacatactcttcagcatttttgtcacaagtggtgcaggagtcgaaactta
ccaaggcaaaaagaggtgacaggaggccctgctgccaaaagcaaagacatcattccactg
gtcacagagatgaaaaagggcccagagatgagggaggagcatgatcggacttggttagcc
ccacttgcagaggaagaggatggttttgaatcttctggtgaaaataatgcccagcacgtc
acacaacctgaggctggaaaacaggcctttgaactccaccagacgaccaagaagtccatc
agcccaggaactcaaagtgtggaaattgatgtgttctctgaagatgacatatgtttgtca
gaacaggatccccaaaagaagtgtgatactaccagtgtgctctcagaatgtagcaccatt
gatccacaggatccctttgggctcgttcctgaaatggttcccaaaaaagaaccggagaga
tgttttcccaaaggcctgggtcactgcttcccatgctgtgccatagacaagagaaagtcc
cccgggctcatttggtggaacctgcggaaaacttgctaccaaatagtgaaacacagctgg
tttgagagttttattatctttgtgattctgctgagcagtggggcactggtatttgaagat
gttcaccttgaggaacgacccaatatccaagcattactaaattgtactgaccatattttc
acatacatttttatcctggagatgggtctaaaatgggtggcctttggatttgggaagtat
ttcaccagtgtctggtgctggcttgatttcgtcattgtgattgtctctgtgaccagtctc
attgacttaaagagcttgaagtccttccggaccctaagagccctgaggcccctacgagca
ttgtcccagttcgaaggaatgaaggttgtagtcaatgctctcataggtgccatacctgcc
attctgaatgttttgcttgtctgcctcattttctggctgatattttgtatcctgggagta
aacttcttttctggaaattttggaagatgcattaatagaacagatataaactcagttata
aattacaacactgttgcaagcaaaactcaatgtgaaagtggaaatttatcttgggtcatc
cttccagtcaactttgacaatgtgggaatggcttaccttgccctgctgcaagtggcaaca
tttaagggctggatggatattatgtatgcagctgtcgattccagagggaaagaactacag
cccgggtttgaggaacaaccagtgaactaccttttcttcgtggcttttatcatctttggt
tcattctttactctgaatctttttattggtgttattattgacaacttcaaccaacagcag
aaaaagataagtggtgaagacatttttatgacagaagaacagaagaaatactataatgca
atgaaaaaattaggatccaaaaaacctcaaaagcccattccaagacctctgaataaatgc
cagggtctcatgtttgacctagtcacaagccaggtctttgacatcatcatcatcatcctc
attttcctcaacatgcttagcatgatggctgaatcaaatgaccagcctgaagccacgaaa
atcatccttgagcgtctcaacctggcctttgtggttatttttacaattgagtgtctcatc
aaaatcttagctttgaggcaatactacttcaccattggctggaatttatttgattgtgtg
atcgtggttctttctattgttagtacaatggtttctgccttggagaaccaggagcacatt
cctttccctccaacactcttcaggattgtccgcttggctcggattggtcggatcctgaga
cttgttcgggcagcacgaggaattaggactctgctttttgctctgatgatgtctcttcct
tctctattcaacatcggtcttctactttttctggttatgtttatttatgccatttttggt
atgagctgtttttgcagagtgaaggaagagcatggaattgatgacatatttaacttcaaa
actttcgtcggcagcatactctgtctcttccagatcaccacctcagcaggctgggatgct
ctcctcaagcccatgctgcaatcaaaggattcatgcaaccccaacttagacagccgtcac
ctccctgccatagccatcacctactttgtcagttacatcatcatctcctttctcatcgtt
gtcaacatgtacattgctgtgattttagagaacttcaacacagctactgaagaaagtgag
gaccctttgggtgaagatgactttgagatattctatgaagtctgggaaaagtttgaccca
gaagcaacacagttcatcaaatattctgttctttctgactttgctgatgcccttcctgag
cctttgcgtgtggcaaagccaaataaatttcaatttctcatgatggacttgcccatggtg
agtggagatcgtctccactgcctggatattctctttgcattcaccactagggtacttggt
gactctgatggcctggacagcatgaaagtgatgatggaagagaagttcatggaagccaac
ccttccaagaagttatatgaacccatagtcaccaccaccaaaaggaaggaagaggaaaga
tgtgctgctgttattcaaaaggcctttcgaaaatacaggctgaagatgtccacaggtgcc
ttggaagacaggcctcattcaccactccagacactctgcaatggagacctgtccagctct
ggggtgaccgagggcaaggtccactatgactga
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integrated database retrieval system
