Ursus americanus (American black bear): 123793224
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Entry
123793224 CDS
T07931
Symbol
LRBA
Name
(RefSeq) lipopolysaccharide-responsive and beige-like anchor protein isoform X1
KO
K24181
lipopolysaccharide-responsive and beige-like anchor protein
Organism
uar
Ursus americanus (American black bear)
Brite
KEGG Orthology (KO) [BR:
uar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
uar04131
]
123793224 (LRBA)
Membrane trafficking [BR:
uar04131
]
Endosome - Lysosome transport
Others
Others
123793224 (LRBA)
Endosome - Golgi transport
123793224 (LRBA)
Autophagy
Autophagosome formation proteins
Atg8 conjugation proteins
123793224 (LRBA)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DUF4704
Beach
DUF1088
NBCH_WD40
PH_BEACH
WD40
Laminin_G_3
Neurobeachin
WD40_CDC20-Fz
WD40_Prp19
Beta-prop_EML_2
Beta-prop_WDR75_1st
WD40_WDHD1_1st
Beta-prop_EML
WD40_MABP1-WDR62_2nd
Cnd3
Beta-prop_WDR90_POC16_2nd
WDR55
WD40_MABP1-WDR62_1st
EIF3I
Beta-prop_IFT140_1st
Beta-prop_Vps41
SUKH_6
Motif
Other DBs
NCBI-GeneID:
123793224
NCBI-ProteinID:
XP_045654802
LinkDB
All DBs
Position
Unknown
AA seq
2871 aa
AA seq
DB search
MASEDNNVPSPPPTGDDGGGGGKEETSAEEGALSLKPGLPIRGIRMKFAVLTGLVEVGEV
TSRDIVETVFNLLVGGQFDLEMNFIIQEGESITCMVDLLEKCDITCQAEVWSMFTAILKK
SIRNLQVCTEVGLVEKVLGKIEKVDNMIADLLVDMLGVLASYNLTVRELKLFFSKLQGDK
GQWPPHAGKLLSVLKHMPQKYGPDAFFNFPGKSAAAIALPPIAKWPYQNGFTFHTWLRMD
PVNNINVDKDKPYLYCFRTSKGLGYSAHFVGGCLIITSIKSKGKGFQHCVKFDFKPQKWY
MVTIVHIYNRWKNSELRCYVNGELASYGEITWFVNTSDTFDKCFLGSSETADANRVFCGQ
MTAVYLFSEALNAAQIFAIYQLGLGYKGTFKFKAESDLFLAEHHKLLLYDGKLSSAIAFT
YNPRATDAQLCLESSPKDNPSIFVHSPHALMLQDVKAVLTHSIQSAMHSIGGVQVLFPLF
AQLDYRQYLSDEVDLTICSTLLAFIMELLKNSIAMQEQMLACKGFLVIGYSLEKSSKSHV
SRAVLELCLAFSKYLSNLQNGMPLLKQLCDHILLNPAIWIHTPAKVQLTLYTYLSTEFIG
TVNIYNAIRRVGTVLLIMHTLKYYYWAVNPQDRSGITPKGLDGPRPNQKEILSLRAFLLM
FIKQLVMKDSGVKEDELQAILNYLLTMHEDDNLMDVLQLLVALMSEHPNSMIPAFDQRNG
LRVIYKLLASTSEGIRVQALKAMGYFLKHLAPKRKAEVMLGHGLFSLLAERLMLQTNLIT
MTTYNVLFEILIEHICTQVIHKQHPDPDSSVKIQNPQILKVIATLLRNSPQCPESMEVRR
AFLSDMIKLFNNSRENRRSLLQCSVWQEWMLSLCYFNPKNSDEQKITEMVYAIFRILLYH
AVKYEWGGWRVWVDTLSITHSKVTFEIHKENLANMFREHQGKVDEEIGQCSSPVEAVSAI
IRDVNVSVSSQQSDVKPCPVSPHITRNSDEKSTVKKTISVDSASNVELQTPNASNEERKT
GQESQELLYEVPVEDTLINEIVNTGDLEVSSDMIEAETVSSNSFKTSGKDIMTVSEVTAS
ISSPSEEDASEVPELLDKSIVEEDDDDYVELKVESSPTEEASLSTELQADSLSPAASEAS
ERLDMLSNDNKLIFQDQESLSKKQTDGETQDSKDSGILTMTASGSSATSPDTTVSQTPVQ
SDVGEMLEEGKKTTNFARETKLIGDSPVFESPTTSEQRIAKLDVSSVATDTERLELKAST
NMEACHPHQPVPEMSRRQEEPGQGTAPDGVNGQRRDSRSALFRIPEFKWSQMHQRLLTDL
LFSIETDIQMWRSHSTKTVMDFVNSSDNVIFVHNTIHLISQVMDNMVMACGGILPLLSAA
TSATHELENIEPTQGLSIEASVTFLQRLISLVDVLIFASSLGFTEIEAEKSMSSGGILRQ
CLRLVCAVAVRNCLECQQHSQLKARGDKAKGQKTMHSLIPMGKSAAKSPVDIVTGGISPV
RDFDKLLQDMDINRLRAVVFRDIEDSKQAQFLALAVVYFISVLMVSKYRDILEPQNERRN
QSFKETSSEHGNLSLPDVENTPSAFRPLTPASVEESESMSSTRRRDSGIGEETAAGLGSS
VDVAPPAVPPSVSAGPDAISEALCTLSLEVNKSQETRNDGGNELENKAASSVPVSKNVNV
KDILRSLVNIPADGVTVDPALLPPACLGALSDLSVEQPVQFRSFDRSVIIATKKSAVLPS
TLTTSLPTNAVSVVSSVDSSQASDVGGESPGGRSSNARLPSVPTVGSVSQDQVSNMSITE
RLEHALEKAAPLLREIFVDFAPFLSRTLLGSHGQELLIEGTSLVCMKSSSSVVELVMLLC
SQEWQNSIQKNAGLAFIELVNEGRLLSQTMKDHLVRVANEAEFILSRQRAEDIHRHAEFE
SLCAQYSADKREDEKMCDHLIRAAKYRDHVTATQLIQKIINILTDKHGAWGNSTVSRPRE
FWRLDYWEDDLRRRRRFVRNPLGSTHPEATLKTAVEHGQCINHSLPIAAAADEDILAKGK
QSIKSQALGNQNSENEILLEGDDDTLSSVDEKDLENLAGPVSLSTPAQLVAPSAVVKGTL
SVTSSELYFEVDEEDSNFKKIDPKILAYTEGLHGKWLFTEIRSIFSRRYLLQNTALEIFM
ANRVAVMFNFPDPATVKKVVNYLPRVGIGTSFGLPQTRRISLASPRQLFKTSNMTQRWQH
REISNFEYLMFLNTIAGRSYNDLNQYPVFPWVITNYESEELDLTLPSNFRDLSKPIGALN
PKRAAFFAERYESWEDDQVPKFHYGTHYSTASFVLAWLLRIEPFTTYFLNLQGGKFDHAD
RTFSSISRAWRNCQRDTSDIKELIPEFYYLPEMFVNFNNYNLGVMDDGTVVSDVELPPWA
KTSEEFVRINRLALESEFVSCQLHQWIDLIFGYKQLGPEAVRSLNVFYYLTYEGAVNLNS
IADPILREAVEAQIRSFGQTPSQLLIEPHPPRGSAMQVYLLLQSPLMFTDQAQQDVIMVL
KFPSNSPVTHVAANTQPGLATPAVITVTANRLFAVNKWHNLPAHQGAVQDQPYQLPVEID
PLIASNTGMHRRQITDLLDQSIQVHSQCFVITSDNRYILICGFWDKSFRVYSTDTGKLIQ
VVFGHWDVVTCLTRSESYIGGNCYILSGSRDATLLLWYWNGKSSGIGDNPGSETTTPRAI
LTGHDYEITCAAVCAELGLVLSGSKEGPCLIHSMNGDLLRTLEGPETCLKPKLIQASREG
HCVIFYENGCFCTFSVNGKLQATMETDDNIRAIQLSRDGQYLLTGGDNGVVMVWQVSDLK
HLFAYPGCDAGIRAMALSYDQRCIISGMASGSIVLFYNDFNRWHHEYQTRY
NT seq
8616 nt
NT seq
+upstream
nt +downstream
nt
atggctagtgaagacaataatgtcccttccccgccaccaacaggtgatgacgggggaggt
ggagggaaagaagaaacctctgctgaagagggtgcattgtccctgaaaccagggctcccc
atcaggggcatcagaatgaaatttgccgtgttgacggggttggttgaagttggagaagta
accagtagggatatagtagaaactgtctttaacctgctggtaggagggcagtttgatttg
gaaatgaatttcattatccaagaaggtgagagtatcacctgcatggtggacctactagaa
aaatgtgacattacttgccaagcagaagtctggagcatgtttacagcaattctgaagaaa
agcatacgaaatcttcaagtctgcaccgaagtaggccttgttgagaaagtgcttgggaaa
attgaaaaagttgacaatatgatagcagatcttttagttgacatgttgggagtgctggct
agctataatttgactgttcgagaactaaagctgttcttcagtaaacttcaaggagataaa
ggacaatggcctccacatgctgggaagttgctgtctgtgttaaagcatatgccgcagaag
tatggtcctgatgcctttttcaactttccaggaaagagtgctgcagccattgcattacct
cctatagccaaatggccataccagaatggttttacatttcatacctggctaagaatggat
cctgtaaataacatcaatgtggataaggataaaccatatttatattgtttcagaacaagc
aaaggtcttggttattctgctcactttgttgggggctgtttgattataacatcaataaag
tcaaaaggaaaaggctttcagcactgtgtgaaatttgattttaagccacaaaagtggtat
atggtaactatagtgcacatttataaccgatggaagaacagtgagcttcgttgttacgtg
aatggtgagctagcttcctatggagagataacatggtttgtcaacaccagtgataccttt
gacaagtgtttcctgggctcatcagaaacagcagatgctaacagagtgttctgtggtcag
atgactgcagtttacctttttagtgaagctcttaatgctgctcagatttttgctatttat
cagttgggcctgggatataagggtacatttaaattcaaagcagaaagtgatctgtttctt
gctgagcatcacaaacttttattgtatgatggcaaactctctagtgccattgcattcacg
tacaatccacgtgctacagatgcccagctctgtcttgaatcatcccctaaggacaatcct
tcaatttttgttcattcaccacatgcacttatgctccaggatgtgaaggcagttttaaca
cattccattcaaagtgctatgcattcaattggaggagtacaagtgctgtttccacttttt
gcacagttggattataggcaatatttatctgatgaggttgacttgactatatgttcaact
ttgcttgcttttatcatggagttgttgaagaactcaattgctatgcaagagcagatgctt
gcctgcaagggcttcttggtaataggatacagtcttgaaaagtcttccaagtcccatgtc
agcagagcagtacttgagctttgtcttgcattttcaaaatatctgagtaatttgcagaat
gggatgcccctactcaaacaattgtgtgatcacattcttcttaacccagctatatggatt
cataccccagccaaggttcagttgacactctatacttacttatccacggaattcattggt
acagtcaacatatataatgccattcggagagttggaacagtgctgctcatcatgcataca
ctgaagtactactactgggcagtgaatcctcaggatcgaagtggtatcacccctaaagga
ttagatggaccacgacctaatcaaaaagaaatactttctctacgagcattcttgttgatg
ttcattaaacagttagtgatgaaggattctggagtaaaggaagatgaactgcaggccatt
ctcaattacctactcactatgcatgaggatgacaatctaatggatgtcctacagctgctt
gttgcattaatgtcagaacatcctaactctatgattcctgcttttgaccaaaggaatgga
ttacgtgttatctataaacttttggcatcgacaagtgaaggaatcagagtacaagctctc
aaggcaatgggctattttttaaaacacttggcaccaaaaagaaaagctgaggtcatgctt
ggacatggattattttcattgctagcagaaagactcatgcttcagacaaatttaatcaca
atgaccacatataatgttttgtttgagattcttatagagcatatttgtactcaagtgata
cacaaacagcatccggatcctgattcttcagtaaagatacaaaatcctcagatactaaaa
gtaattgcaaccctacttcgaaattctcctcagtgcccagagagcatggaagttcgcaga
gcctttctttctgacatgattaaactttttaataacagtagagaaaacagaaggagcttg
ctacagtgttctgtatggcaagagtggatgctttctctttgctatttcaatcctaagaat
tctgatgagcaaaagataacagaaatggtatatgccatattcagaatcctactttaccat
gcagtcaaatatgagtggggtggctggcgtgtgtgggtagacaccttatcaatcacacat
tcaaaggtcacttttgaaatacacaaagaaaatcttgcgaatatgtttagagaacaccag
ggaaaagttgatgaagaaataggacaatgttcaagtccagttgaagcagtctctgccatt
atcagggatgttaatgtttcagtatcatcccagcaatcagatgtgaagccttgtcctgtg
tctcctcatatcaccagaaatagtgatgaaaagtcaactgttaagaagacaatttcagta
gactccgcttccaacgttgaactgcagactcctaacgcatctaatgaagaaaggaaaact
ggtcaagaaagtcaagagttactatatgaagtcccggtagaagacacactgataaatgaa
atagttaatacaggtgatttagaagtatcctctgatatgatagaagctgagactgtttcc
tctaattcttttaaaacaagtggcaaagatataatgactgttagtgaagtaactgcttct
ataagttctccttcagaagaggatgcctcagaggtgccagaattattggataagtctata
gtagaggaagatgatgatgattacgtagaactgaaggtagaaagtagtcctactgaggaa
gccagtctatccacagagctccaagcagatagtttgtctccagctgcatctgaagccagt
gaaagactggacatgcttagtaatgacaacaaattaatatttcaagaccaagaatctcta
agtaagaagcaaactgatggtgaaactcaagattccaaagattctggaatcttgactatg
acagcatcagggtcttcagctacctcaccagatactactgtttcccagacacctgtacaa
tcagacgttggtgagatgctagaggaagggaagaaaacaactaactttgcaagagaaacc
aaattaattggtgattctcctgtctttgagtctcctactacttctgagcagaggattgct
aaattagatgtttccagtgttgctacagatactgagagattggaattgaaggccagtaca
aacatggaagcatgtcatcctcatcaacctgtgcccgagatgtcaaggcggcaggaggaa
ccaggtcaaggaacagcaccagatggagttaatggacaaaggagggattccagatctgct
ctgtttcgtattcctgagttcaaatggtctcaaatgcatcagcgtttgctcactgatcta
ttattttcaatagaaacagatatacagatgtggagaagccattcaacaaagacagttatg
gacttcgtgaatagcagtgataacgtcatctttgtacacaacacaattcatctcatctct
caagtgatggacaatatggtcatggcttgtgggggtatactgccattgctttcagcggct
acatcggctacacacgagctggagaatattgaacctactcaaggcctttcaatagaagcc
tctgtaacatttttgcagaggctaatcagccttgtggatgtgcttatatttgcaagttct
cttggctttactgaaattgaagctgaaaaaagtatgtcttctggtggaattttgcgacag
tgtcttcgactagtgtgtgcagtggcagtaaggaattgtttagagtgtcaacagcattca
caactgaaagctagaggagataaagccaaaggccagaaaacaatgcacagcctgattccc
atggggaaatctgcagcaaagagtcctgtggacattgtaactggtggtatatctccagta
agagattttgacaagctcctacaagacatggatattaatcggcttagggcagttgtcttc
agagatatagaggatagcaaacaagctcagtttttagccttggcagttgtgtactttatc
tctgttcttatggtctcaaagtatagagacattttggaaccccaaaatgaaaggcgcaac
cagtcatttaaggaaactagtagtgaacatgggaatttatcacttcctgatgtagaaaat
acaccatcagcatttcgtccgttaacaccagcatcagtggaagaatctgaaagcatgtca
tctactcgaaggagggactcaggcattggggaagaaacagctgctggcttaggaagcagt
gtggatgtagctcctcctgcagtacctccaagtgtcagcgcaggcccagatgcaatcagt
gaggcgctgtgcactctttctttagaagtcaataaatctcaggaaaccagaaatgatgga
ggaaatgagttggagaacaaggctgcgtcatcagttccagtttcaaaaaatgtcaatgta
aaggacattcttcgaagcttggttaatataccagcagatggagtcacggtggatcctgcc
cttctgccaccagcctgccttggagctctcagtgatctatctgttgaacaacctgtgcag
ttcagatcttttgatagaagtgtcatcattgcaacaaaaaaatcggcagtcttaccttct
acacttactacaagtttacctaccaatgctgtcagcgtggtttcttcagtagactcaagc
caagcctcagatgtaggaggagaatcacctggtggtagatcatctaatgcaagattgccc
tcggtgccaacagttggctcagtttcacaagaccaagtttcaaatatgagtattacagag
aggcttgaacatgctttggaaaaggcagctcctcttctgcgagaaatttttgtggatttt
gcaccttttctttctcggacacttttgggtagtcatggacaagaactgcttatagaagga
acaagtctggtttgcatgaagtctagtagttcggttgtggaattggttatgctactgtgt
tctcaggagtggcagaattctatccagaagaatgcaggccttgcttttattgaacttgtc
aacgaaggaaggttgcttagccaaacaatgaaggatcatctagtaagagtagcaaatgaa
gctgaatttatcctgagcaggcaacgagcagaagatattcacagacatgcagaatttgag
tcactgtgtgcccagtattcagcagacaaacgagaagatgagaagatgtgtgatcatttg
ataagagcagctaaatatcgagaccatgtgacagcaactcaactaatccagaaaattatc
aacattctcacagacaagcatggagcctggggaaattctacagtgagtcgtcctcgtgag
ttctggcgccttgactactgggaagatgacttgcggcgccggcgacgatttgtgcgtaac
cctctaggatcgacacatcctgaagcgacactaaaaacagccgtggaacatggtcagtgt
ataaaccactccttgccaatagcagcagctgcagatgaagatatcctcgctaaaggaaaa
cagtccatcaagagtcaggctttaggaaatcagaactcagaaaacgagatcctcctggaa
ggcgacgatgatactctgtcatccgtggatgagaaagatttagagaatctcgctggtcct
gtcagcctgagcacaccggctcagcttgtggccccctctgctgtagtaaagggcactctt
tctgtcacctcctccgaactctattttgaggtggatgaagaggactctaacttcaagaaa
atcgaccccaagatcctggcatatacagaagggctgcatggaaaatggctgtttacagag
atacgatcaatcttttctcgtcgttatcttttacaaaatacagccttggagatctttatg
gcaaacagagttgctgtaatgttcaacttcccagaccctgcaacagtaaagaaagtagtt
aactatctacctcgtgttggtattggaaccagttttggattgcctcaaacccggcgtatc
tcattagctagtccacgtcaactttttaaaacttctaatatgacccagcgatggcagcat
agagagatttcaaattttgagtatttgatgtttctcaacacaatagcaggacggagttac
aatgacttaaatcagtatccagtgtttccctgggtcatcactaattatgaatcagaagaa
cttgatcttaccttgccaagcaacttcagagatttgtccaagccaataggagctttgaat
ccaaaaagagcagcattctttgcagagcgttacgaatcatgggaagatgatcaagttcca
aagttccactatggtactcattactcaactgcaagttttgttcttgcatggctgctaaga
atagaacccttcacaacttatttcctaaatttgcaaggagggaaatttgatcatgcagat
cgaactttttcatcaatttccagagcttggcgaaactgtcagcgtgatacatctgatata
aaggagttgatccctgaattttattatctccctgagatgtttgtcaacttcaataattat
aatcttggagtgatggatgatgggacagtagtgtctgatgttgaacttcctccttgggcc
aaaacctcagaagaatttgttcgcataaacagattggccctggagagtgaatttgtttcc
tgccagcttcaccaatggattgatctcatttttggctataaacagctaggaccagaggct
gttcgatccctcaatgtgttctattacctgacctatgaaggagctgtcaatctgaattca
atagctgatcctatattgagagaggctgttgaagctcaaattcgaagttttggacagact
ccttctcaactactcatagagccccatcctcccagaggttctgctatgcaagtgtatctc
ctcctgcagagtccattgatgttcacagaccaagcccagcaggatgttatcatggtccta
aagtttccctccaactcccctgtcactcacgtggcagctaacacccagcctggtttggcg
actcctgccgtgatcacagtcactgctaacagactatttgcagtgaacaagtggcacaac
cttcctgctcatcaaggtgcagtacaagaccagccataccagctgccagtggaaatcgat
cctctcatagccagcaatacaggaatgcacaggaggcaaatcactgaccttttagaccaa
agtattcaggtccattcccagtgctttgtcatcacttcagacaaccgctatattctcatc
tgtggcttctgggataagagtttccgagtctactctactgacacaggaaaattgattcaa
gtggtatttggccattgggatgtggtcacttgcctcactcgttctgaatcctatatcggg
ggaaattgctacattctctcagggtcacgtgacgcaacccttctgctctggtactggaat
ggaaagagcagtgggattggagataacccaggcagtgagaccaccactcctcgagccatt
ttgacaggccatgactatgagatcacttgtgctgctgtctgtgctgagctcggcctggtg
ttaagtggttccaaagaaggaccatgtctcatacattccatgaatggagacttgttaagg
actttggaaggtcctgagacctgcctgaaaccaaaactcattcaggcgtcaagagagggt
cattgtgtcatattctatgaaaatggctgcttctgtacattcagcgtgaacgggaaactc
caggccactatggaaacagatgataacataagggccatccagctgagccgagatgggcag
tacctgctcacaggaggagacaacggtgtggtcatggtctggcaggtgtctgacctcaag
cacctctttgcctatccaggctgcgatgctggaatccgggccatggcgctgtcttacgac
cagaggtgcatcatttctggcatggcctcaggaagcattgtgctgttttacaacgacttt
aaccggtggcatcacgaataccaaacccgctactga
DBGET
integrated database retrieval system
