Ursus americanus (American black bear): 123793548
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Entry
123793548 CDS
T07931
Symbol
RP1L1
Name
(RefSeq) retinitis pigmentosa 1-like 1 protein
KO
K19538
retinitis pigmentosa 1
Organism
uar
Ursus americanus (American black bear)
Brite
KEGG Orthology (KO) [BR:
uar00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
uar03037
]
123793548 (RP1L1)
04812 Cytoskeleton proteins [BR:
uar04812
]
123793548 (RP1L1)
Cilium and associated proteins [BR:
uar03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
123793548 (RP1L1)
Cytoskeleton proteins [BR:
uar04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Microtubule-associated proteins (MAPs)
123793548 (RP1L1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DCX
DCX2_DCDC1
Motif
Other DBs
NCBI-GeneID:
123793548
NCBI-ProteinID:
XP_045655343
LinkDB
All DBs
Position
Unknown
AA seq
1907 aa
AA seq
DB search
MNSTLRDAQAPSHRECLLPSMARTPSVTQVMPAKKITFLKRGDPRFTGVRLAVDQRTFKS
FGALMDELSQRVPLSFGVRSVTTPRGLHGLNALEQLEDGGCYLCSDKKPPKTPSRPGWSQ
GRSPSAQQSRDFESQYEAPGTSSSCNGPKAPRRIMLVKNGDPRFQQTVVLSHRNTRNLTA
FLSKASDLLHFPVKQVYTTSGKKVDSLKGLLHSPSVLVCAGYESFKPLAIEDSRRYGTET
LSGQTPRNKTGSWGPKAKQSVIHSRSRSGSRPRRFSLLSERSGLSNPPVSLHCAQMGPAL
DGQPQDVPAQLGPLVASDDVEKKVRMNEDGSLSVEMKVRFHLLGEDALLWSRRVGRASAL
TAASEEVPVLGEVDSFHCVWEDHPGGSSEPGAQGRGPCEAGCEEALSRSRWQPGSRYEIW
MNPLYSTQGEGTASQRRSRLTQHSHSRRPCSQVFTSRKRSSKDSVSPASSDRAPKDSEPN
SSCCSRSPEGSVGSCDLHSALGAASQRGAEWEAGSPCRINESPGPQGAGQGSRERHCCLK
PQTQGSAGALSDSSGSAGSHEESSERGEEHQGCLNKTRAVTTSWTKATQGEGPSPPTGSP
LSLRHKDSQAEESGQGITHSQAKGRSGIRPPLALGHSGSGDTAEGHSPPSACASVPGRRR
KKGRASAVSSPSISGLSRGAQLGRSRQHYTRRHTHCPCDSPVPRQMPGPPSGGRAHPDGP
APPLSASSPSARNQASQDMGPSSSASLHSQYAQGVSSALITPVSNSGSASDFYPPYSPSA
ETEGDPEFRARSPAPTPSNISDSLSNQADGLDKNSGGGIPKPSWPLVGQPEAGRPGTHRG
CCCSTISTSLFPGTPSDKTHALQTSQPLGSQGPFSEVCLVCSRYCPTPPRTWPFVKKHLL
CSSSPGADWGPGGGQLREGKLDAWRPRPPGSQSGAMGKAVKASRRGSSSCGLRSGRIFHG
KVAGGGESLEGQEKDGRMALGALPRASPDAVVREWLSNIPEEPISMKSEMVGESTDVTGG
DPEGPKEDPVDKHSPACLGEPTQVRQLSHEGAASEKAEPVTGEACPRSGQGLPCSGVSED
PREAGSGKGMAVDCGVGPCVLPHKVSASIQIMKALIGSKRGRPSSLPEVSSAAGRRLSRS
AQALITCLAGLHFFDEDLGSTTGQVRFIDSPRYQELLSTFQALWPGCGPRRGEPVSGLWE
LGWCQALPGLRSNIMTEDFTPTSSSGVDVGSGSGGSGEGSGPCAMECALVPESITLPLKI
PCQRPDSRTSENQEDPGNQQLSSSTASSNSQAWACGSREDEAERNSRGQVLGSNLDQVVE
NTMQEEEVPLEKVREEKEIAELQGEGVQGFPEKGRVMGQELSEANSQEGEGAQEGKSTQE
EEAGRDPASTILCPPGKREKPIELPRSLSEKDANASGPKLEPGLEKLSKAADTHHVQTQA
KCTQGLGETSSSAARRVSLDPDPLWVSKLLRKMEKAFMAHLSSATAELRTRWSLQNNPLL
DQMVAELQQDLGRRLRESTENELRKIQSRAGGRTPGPAREALRWEMSLQTELRRRRLQGL
RHLSAFSGQAGSPGPLSFPAEEEASTLSGALGTWLVEEAEGEEFCPCEACMQKKPIPTSP
KDTMGASRAPIRKAFDLQHILQKKKGGCASGEASEKRGMEPLQGDPLGTGTVQDGGLELG
LDQDPGTEGAEENMEEGSGADASLEGEASGGGDPSPRGQNYGVKTAEAREAEGEGQLESG
GGNQGEKEGSPQVGWGKGQPGETSGNSSPDQEGKPGLPPTPGGHSPCQRSGWKAGLASSS
ISSLGNCSQLSQKGSEEKPLNGDMRNIEEESKGVPGPKRKITGMHPESSTSEQEGVPLGP
RSSEQEADEASGLEAEKVVKTLAFTEMRFENLTLDRTDGFGQDDLDF
NT seq
5724 nt
NT seq
+upstream
nt +downstream
nt
atgaacagcaccttgagggatgcccaggcccccagccaccgtgagtgcctcctgccttcc
atggcccggaccccctctgtcacccaggtcatgccagccaagaagataaccttcctcaag
cgaggggatccccggtttactggggttcgcttggctgttgaccagcgcactttcaagagc
tttggtgctctgatggacgagctctctcagcgtgtgcctctctcctttggggtgcgttct
gtcaccacaccccggggcctgcatggcctcaatgccctggaacagctggaagatggtggc
tgctacctctgctctgataagaagccccccaaaacacccagtaggccaggctggtcacaa
gggagaagcccatctgctcagcagtcgagagattttgaaagtcagtatgaggcgccagga
acatcctcttcctgcaacggtcctaaggccccaaggaggataatgctggttaagaatgga
gaccctagattccagcagacagtggttctcagccatagaaatacaaggaacttgacggcc
tttctcagcaaagcctcagatcttttgcactttcctgtgaagcaggtatacacgacgagt
gggaaaaaggtggactctctgaagggtctgctccacagtccctcagtgttagtatgtgct
ggctacgagtctttcaaaccactggcaatagaagattctagaagatatgggactgaaact
ttatctgggcagactccaagaaacaaaaccggaagctgggggccaaaggccaagcagagt
gtgatccactcaaggtccaggtcgggcagccggccacggcggttttccttgctgtcagag
aggtctggtctcagcaaccccccggtgtccctgcattgtgctcagatgggccctgctctt
gacggacagcctcaggacgtgcctgcccagctcggcccattggtggccagtgacgatgtt
gagaaaaaggtccgcatgaatgaggatggcagcctgtctgtggagatgaaagtccgcttc
catctacttggcgaggatgcgctcctgtggtccaggagggtggggagggccagtgccctc
acagcagccagtgaggaggtccctgtcctgggggaagtggactccttccactgtgtgtgg
gaggaccaccctgggggctcctcggagcctggggcacagggacgggggccctgtgaggca
ggatgtgaagaagcccttagccgaagccggtggcagccaggatccaggtatgagatctgg
atgaaccccctgtactctacccagggagaagggacggcctctcagaggagatccaggctg
acccaacactcccattccaggaggccctgtagccaagtgttcaccagcaggaaaagaagc
agcaaggacagtgtcagccctgcctccagtgacagagcccccaaagactctgaaccaaac
tcctcctgctgctccaggtctccggagggcagcgtgggcagctgcgacctacattcagcc
ctgggggctgcctctcagaggggagcagagtgggaagctggcagcccatgcaggattaat
gagagcccaggtccacagggagcagggcagggcagcagggagcgccattgctgcctgaag
ccccagacccaaggctcagcaggtgctctttctgactcctcagggagtgctgggtctcac
gaggagtctagtgaaaggggtgaagaacaccagggctgcctgaacaagacaagggccgtg
actacttcctggacaaaggccactcagggggaaggccccagtcctcccacggggagtccc
ttgtctttgaggcacaaggactcacaggcagaggagagtggacagggtatcacacactcc
caggctaagggtaggtctgggataagaccacccttggctctaggtcattctggctctggg
gacactgcagaaggccattctccaccttctgcctgcgcttcagtcccaggcaggaggaga
aagaagggcagagccagtgctgtgtcctcacctagcatttctggcctcagccgaggggct
cagctaggccgctccaggcagcactacacccgaaggcacacccactgcccatgtgactca
cctgtgcccaggcagatgccgggacctcccagcggaggcagggcccatccagatggccca
gcgccacccctctctgcaagctcacccagtgccaggaaccaggcctcccaggacatgggg
ccatcctcctctgcttctcttcattcccagtatgcacagggggtcagcagtgctctcatt
acccctgtgagcaattctggttctgcttccgatttctaccccccatactctccttctgct
gagactgaaggggaccctgagttcagggcacgctcaccagctcccacaccttccaacata
tcagactctttgagcaaccaagctgatggtctggacaaaaactcagggggtggcattccc
aagccttcctggcctttagttggacagcccgaggcagggaggccaggaacccaccgaggc
tgctgctgctcaacgatcagcacatccctgttccccgggacccccagtgataagactcat
gccctgcagacctcccagccactgggcagccaggggcccttctctgaggtctgcttggta
tgcagcagatactgtcccactcccccaaggacatggccttttgtcaagaaacaccttttg
tgcagcagcagccccggtgctgactgggggccaggtgggggacagctgagggaaggcaag
cttgatgcatggcgaccgcggccccctggctctcagtcaggggcaatggggaaagcagtc
aaagcctcgagaaggggcagctccagctgtggcctcaggtctgggagaatattccacggg
aaggtggctggtggaggggaaagcctggaggggcaagagaaagatggcagaatggcactg
ggtgctctgccccgagcctcaccagatgctgtggtccgtgaatggctgagcaacatccca
gaggagcccatatccatgaaaagtgagatggtgggtgagagtacagatgtgaccgggggt
gatccagaaggccccaaggaggaccctgttgacaaacattccccagcatgtctaggggag
ccaacgcaggtcagacaactgtcacatgaaggggccgccagtgaaaaagcagagccagtg
actggtgaagcttgtcccaggtcaggacagggtcttccttgtagtggagtttccgaagac
cccagggaggctgggtcaggcaaaggcatggccgtggactgtggtgtgggcccttgcgtg
cttccgcacaaggtctctgcctccatacagattatgaaggcactgataggctccaagcgg
ggccggcccagtagcctgcccgaagtgtccagcgcagcaggcaggaggctcagccgctct
gcccaggcccttatcacatgtctagctggactccacttctttgatgaagaccttgggtct
accactggccaagtgaggttcatagactctcctcggtaccaggagctcctgagcaccttc
caggccctgtggccggggtgcggccccaggcgaggtgagccagtctcaggcctctgggag
cttggctggtgccaggctctgccaggcctcaggtccaatatcatgactgaggacttcacg
ccaacgtcctcatctggcgtggatgtcggcagtggctctggaggctcaggggagggcagc
ggaccctgtgccatggagtgcgccctggtccctgagagcataacgctgcccttgaaaatc
ccctgccagaggcctgattctagaacctccgagaaccaagaggatccaggaaaccaacag
ctgagtagttccacagcctcttccaattcccaagcatgggcttgtggcagcagagaagat
gaggcagagagaaacagtagggggcaggtgctgggcagtaacctggaccaagtagttgaa
aacacaatgcaagaagaggaggtaccattagagaaagtcagagaagaaaaagaaatagca
gaactgcaaggagagggtgtccagggattcccagaaaagggaagagtcatgggacaagaa
ctgtcagaggctaactctcaggaaggggagggtgcacaggaaggtaagagtacacaggaa
gaggaagcaggaagagaccctgcctccactatactttgccctccagggaaaagagagaaa
cccatagagctccctaggagcctcagcgagaaggatgcaaatgccagtggccccaaactt
gagcctggtttggagaagttgtccaaagctgctgacacacaccatgtgcaaacccaggcc
aagtgcacccaggggcttggagagacgagctcttctgcagcccgcagagtgtctctggac
cctgatcccctctgggtgtccaagttgctgaggaagatggagaaggccttcatggcccac
ctctccagcgccacagctgagctccgaacccgctggagtctacagaacaaccccctgctg
gaccagatggtagcggagctgcagcaggacctgggccggcggctgcgagagagcaccgag
aacgagctccggaagatccagagccgggcagggggcaggacgccagggccggcccgggaa
gccctcaggtgggagatgtccctgcagaccgagctgcgtaggcgccgcctccagggcctg
cggcacctctcggccttctctgggcaggctggaagcccagggcccctctccttccccgca
gaggaagaggcatccacactcagcggagccctggggacctggctggttgaggaggctgag
ggggaggagttttgtccctgtgaggcctgcatgcagaagaaaccgatccccacgtccccg
aaggacacaatgggggcatccagggcacccatcagaaaggccttcgacctgcagcacatt
ctgcaaaagaagaaaggggggtgtgctagtggggaggcctctgagaagagagggatggag
ccccttcagggggaccccttggggacagggactgtccaggatggaggcctggagctggga
ttagaccaggaccctgggacagagggggctgaggaaaacatggaagagggctctggggcg
gatgccagtttggaaggtgaagcctcgggaggaggtgacccaagtccaagaggacagaac
tatggtgtcaaaactgcagaggcccgggaagctgaaggagaggggcagctagagtcaggg
ggaggaaaccaaggggagaaagaaggtagcccgcaagtcggctggggaaagggtcagcca
ggtgagacttctggaaacagcagcccagatcaagaggggaagccaggactgccccctacc
ccaggtggacacagcccttgccaaaggtcaggctggaaagcaggcctcgcctcctccagc
atatcatctctgggaaactgttctcagctctctcagaaaggctctgaagaaaagcctttg
aacggcgacatgaggaacattgaagaggagtccaagggagtacctggtccaaagagaaaa
atcacaggcatgcatccggaaagctccacttctgagcaagaaggggtgcccttgggccca
aggtcttcagagcaggaggcagatgaggcttctggcctagaagctgagaaggtagttaaa
actcttgctttcacagaaatgaggtttgaaaacctcaccctggacaggacagatggcttt
ggccaagatgacttagatttctag
DBGET
integrated database retrieval system
