Ursus americanus (American black bear): 123794266
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Entry
123794266 CDS
T07931
Symbol
VARS2
Name
(RefSeq) valine--tRNA ligase, mitochondrial isoform X1
KO
K01873
valyl-tRNA synthetase [EC:
6.1.1.9
]
Organism
uar
Ursus americanus (American black bear)
Pathway
uar00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
uar00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
123794266 (VARS2)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
uar01007
]
123794266 (VARS2)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
uar03016
]
123794266 (VARS2)
Enzymes [BR:
uar01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.9 valine---tRNA ligase
123794266 (VARS2)
Amino acid related enzymes [BR:
uar01007
]
Aminoacyl-tRNA synthetase
Class I (U)
123794266 (VARS2)
Transfer RNA biogenesis [BR:
uar03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
123794266 (VARS2)
Prokaryotic type
123794266 (VARS2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
tRNA-synt_1
Anticodon_1
tRNA-synt_1g
tRNA-synt_1_2
tRNA-synt_1e
tRNA-synt_1f
Motif
Other DBs
NCBI-GeneID:
123794266
NCBI-ProteinID:
XP_045656479
LinkDB
All DBs
Position
Unknown
AA seq
1064 aa
AA seq
DB search
MPHLPLVSFRSPFWGLKPSRGFPRFHPLSTHSKPHGSSLSRRNHEAKQKRQREKQAALEA
GIAGKSKSPAESSKAWTPKEVVLYEIPTEPGEKKDVSQLLPPAYSPRYVEAAWYSWWVRE
GFFKPEYQTKLPQATGETFSMCIPPPNVTGSLHIGHALTVAIQDALVRWHRMCGDQVLWV
PGSDHAGIATQAVVEKQLWKERGVRRHELNREEFLREVWKWKEEKGGEISEQLQALGASL
DWDRECFTMDAGSSVAVTEAFVRLYEAGLLYRSQQLVNWSCALRSAISDIEVESRPLPGR
TELRLPGCPTPVSFGLLVSVAFPVDGEPGEDAEVVVGTTRPETLPGDVAVAVHPGDSRYT
HLHGRQLRHPLTGQLLPLITDSAVQPHVGTGAVKVTPAHSPADAELGARHGLSPLSVIAE
DGTMTSLCGDWLQGLHRFVAREKIMSALRERGLFRGLQNHPMVLPICSRSGDVVEYLLKS
QWFVRCQEMGARAAQAVESGALELSPSFHQKNWQHWFSHIGDWCVSRQLWWGHRIPAYLV
VGEHTKGDKEDCWVVGRTEAEARKIAAELTGKPGTELTLHRDPDVLDTWFSSALFPFAAL
GWPQETPDLARFYPLSLLETGSDLLLFWVGRMVMLGTQLTGQLPFSKVLLHSMVRDRQGR
KMSKSLGNVLDPRDIISGAELQVLEAKLRDGNLDSTELAIAATAQRKDFPHGIPECGTDA
LRFALCSHGALGGDLHLSVSEVLSSRHFCNKIWNALRFVLNALGEKFVPQPTEELSPSSP
MDAWILSRLAHAAWECERGFLARELSLITRALHHFWLHSLCDVYLEAVKPVLSHSPHAPG
PPQVLFSCADVGLRLLAPLMPFLAEELWQRLPRRPGGRSAPSICVAPYPIARSLEHWRQP
ELEQRFSRVQEAVQALRALRATYQLTKARPRVLLQSSEPGEQGLFEAFLEPLGTLGHCAA
VGLLPPGVAAPSGWAQAALGDTAQVYMELQGLVEPRAQLSLLAARRHKLQKQLDGLTDWT
PSDGESEAKRQQRLSSLQLELSKLDKAASYLQELMDVCPSPGQL
NT seq
3195 nt
NT seq
+upstream
nt +downstream
nt
atgcctcatttacctttggtctcttttcgatcaccattctgggggctgaagccctcacgg
ggcttccccaggttccatcccctctctacccactcaaagccccatggatcctctctctcc
cggaggaaccatgaagccaaacagaagcgccagcgagagaagcaggcggcgctggaggct
gggatagccggaaagagcaagtcacctgcagaatccagtaaggcctggactcctaaggag
gtagtgttgtatgaaatccccacggaacccggtgaaaagaaagatgtctcccagctcctg
cctcctgcatacagcccccgatatgttgaggctgcctggtactcttggtgggtgcgagag
ggcttcttcaaaccagagtatcagaccaagctgccccaggctacgggggagaccttttcc
atgtgtatcccacctcccaatgtcactggctccctccatattgggcatgccctgacggtg
gccatacaggatgccctggtgcgctggcaccggatgtgtggggatcaggtgctgtgggtc
cctggctcagatcatgcaggaattgctacacaagctgtggtggagaagcaactgtggaag
gagcgaggagtgaggagacacgagctgaacagggaagaattccttagggaggtgtggaag
tggaaggaggagaaaggtggagagatcagtgagcagctccaagctctgggggcctccctg
gactgggaccgagagtgcttcactatggatgctggctcctcagtggctgtgactgaagct
tttgtgcgactctacgaggcagggttgttgtaccggagccagcagcttgtcaactggtcc
tgtgctctaagatcagccatctcggatattgaggtggagagccggcccctgcctggccgc
acagagcttcgactgcctggctgccccactcctgtgtctttcggcctccttgtttctgtg
gccttccctgtggatggagagcctggtgaggatgcagaggttgtggtaggaaccacaagg
ccagagacattgcctggagacgtggctgtggctgttcatcctggcgactcccgatacaca
catctgcacgggcgacagcttcgtcaccccttgactgggcagcttctccctctcatcaca
gactctgctgttcagccacatgtgggcaccggggcagtgaaggtgactccagcgcatagc
cctgctgatgccgagctgggggcccggcacggcttgagccccctgagtgtcatcgcagag
gatgggactatgacctccctctgcggggactggctacagggtcttcaccgattcgtggcc
cgggaaaagatcatgtcggcgctgagggagcggggcctgttccggggcctccagaaccac
cccatggtgcttcctatttgcagccgttctggggacgtggttgaatatctactgaagagc
cagtggttcgtccgctgccaggagatgggggcccgagctgcccaggctgtggagtcaggg
gctctggagctcagtccgtccttccaccagaagaactggcagcactggttttcccacatc
ggggactggtgtgtctcccggcagctgtggtggggccatcggattcccgcctacctggtg
gtaggggagcacacgaagggggataaggaggactgttgggtggttgggcggacagaggcc
gaggccagaaaaatagctgcagaactgacagggaaaccagggacagagctgaccctgcac
agggatcctgatgtcctggacacatggttctcttcggctctttttccctttgctgccctg
ggctggccccaagagaccccagaccttgctcggttctaccccctgtcacttttggaaacg
ggcagtgaccttctgttgttctgggtgggccgcatggtcatgttggggacccagctcaca
gggcagctccccttcagcaaggtgcttctccattccatggttcgggacaggcagggccgg
aagatgagcaagtccctggggaatgtgttggacccacgagacatcatcagtggggcggag
ctgcaggtgctggaggcaaagctgagggatgggaacttggactccacagagctggcgatc
gcagctacggcccagagaaaggactttcctcatgggatccctgagtgtgggacagatgcc
ctgcgattcgccctgtgctcgcacggggccttgggaggcgacttgcacctgtctgtctct
gaggtcctgagttcccggcatttctgcaacaaaatctggaatgccctgcgctttgtcctc
aatgccttaggggagaaattcgtaccccagcctacagaagagctgtccccctcatccccc
atggacgcctggatcctgagccgtcttgcccacgctgcctgggagtgtgagcgaggcttc
cttgctcgagagctgtcactcatcacccgtgccctgcaccacttctggctgcacagcctc
tgtgacgtctacttggaggctgtgaagccagtgctgtcgcactcgccccatgccccaggc
cccccgcaggtcctgttctcctgtgctgacgtcggtctccgcctccttgccccactgatg
cccttcctggctgaagagctctggcagagactgccccgcaggcctggcggccgctctgcc
cccagcatctgtgtcgctccctaccccattgcccgcagcctggagcactggcgccagccc
gagctggagcagcgcttctcccgggtgcaggaggccgtgcaggcactgagggctctccga
gccacataccagctcaccaaggcccggccgcgagtgctgctgcagagctcagagcctgga
gagcagggcctctttgaggccttcctggagcccctaggcaccctgggccactgtgcggcc
gtgggcctcttgccccccggtgtagcggcgccctccggctgggcccaggccgcactcggc
gacaccgctcaggtgtacatggagctacagggcctggtggagccccgggcccagctgtcc
ctgctagccgcccggagacacaagctgcagaagcagctcgatggcctcacggactggacc
ccatcagacggggaatcagaggcaaagaggcagcagaggctgtcttccctccagctggaa
ctatcgaagctggacaaggctgcctcttacctccaggagctgatggatgtgtgtcccagc
cccgggcagctctga
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integrated database retrieval system
