Ursus americanus (American black bear): 123794772
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Entry
123794772 CDS
T07931
Symbol
PRPF40B
Name
(RefSeq) pre-mRNA-processing factor 40 homolog B isoform X1
KO
K12821
pre-mRNA-processing factor 40
Organism
uar
Ursus americanus (American black bear)
Pathway
uar03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
uar00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
123794772 (PRPF40B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
uar03041
]
123794772 (PRPF40B)
Spliceosome [BR:
uar03041
]
Complex A
U1 snRNP components
U1 related factors
123794772 (PRPF40B)
Complex B
123794772 (PRPF40B)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FF
WW
WW_TCERG1
DUF4936
RhoGAP-FF1
WW_2
Motif
Other DBs
NCBI-GeneID:
123794772
NCBI-ProteinID:
XP_045657068
LinkDB
All DBs
Position
Unknown
AA seq
938 aa
AA seq
DB search
MLYASRTKALELPQTWGGGLRRVGDKWIFPDRSKEVSFLLSVPSFPHFQMPPPGIPPPFP
PMGLPPMSQRPPAIPPMPPGIMPPMLPPMGAPPPLTQIPGMVPPMMPGMLMPAVPVTAAT
APGADTASSAVAGTGPPRALWSEHVAPDGRIYYYNADDKQSVWEKPSVLKSKAELLLSQC
PWKEYKSDTGKPYYYNNQSKESRWTRPKDLDDLEALVKQEAAGKQQQQPQILQPQPPQPQ
PEPPPGPPGPTPLPLGLLEPEPGGSEDCDMSEAAQPVEQGFLQQPEEGPSSATGQHQPPQ
QEEEESKPEPERSGLSWSNREKAKQAFKELLRDKAVPSNASWEQAMKMVVTDPRYSALPK
LSEKKQAFNAYKAQREKEEKEEARLRAKEAKQTLQHFLEQHERMTSTTRYRRAEQTFGEL
EVWAVVPERDRKEVYDDVLFFLAKKEKEQAKQLRRRNIQALKSILDGMSSVNFQTTWSQA
QQYLMDNPSFAQDHQLQNMDKEDALICFEEHIRALEREEEEERERARLRERRQQRKNREA
FQTFLDELHETGQLHSMSTWMELYPAVSTDVRFANMLGQPGSTPLDLFKFYVEELKARFH
DEKKIIKDILKDRGFCVEVNTAFEDFAHVISFDKRAAALDAGNIKLTFNSLLEKAEARER
EREKEEARRMRRREAAFRSMLRQAVPALELGTAWEEVRERFVCDSAFEQITLESERIRLF
REFLQVLETECQHLHTKGRKHGRKGKKHHRKRSHSPSFPDLRASGGQRTCALTCVCRSAQ
GSESEEEELPPPSLRPPKRRRRNPSESGSEPSSSLDSVESGGAALGGRGSPSARLLLGSD
HGLRKAKKPKKKTKKRRHKSNSPESETDPEEKAGKESDEKEPEQDKDRELRRAELPNRSP
GFGIKKEKTGWDTSESELSEGELERRRRTLLQQLDDHQ
NT seq
2817 nt
NT seq
+upstream
nt +downstream
nt
atgctttatgcttctcgaaccaaagccttggaattgcctcagacctggggtggagggttg
agaagggtgggagacaagtggatattccctgacaggtccaaggaggtgtcttttctgctc
agtgtcccttcctttcctcacttccagatgccccctccaggaatccccccaccctttcct
ccgatgggactaccccccatgagtcagagaccaccagccatccccccgatgccacctggc
atcatgcccccaatgcttccaccaatgggggcaccaccaccactcacgcagataccagga
atggtacctcccatgatgccaggaatgctgatgccagcggtgcctgtcaccgcagcgacg
gctccgggtgcggacacagccagctctgctgtggctgggacaggccctccgagggccctg
tggagtgagcatgtggcccctgacgggcgcatctactactacaatgccgacgacaagcag
tccgtgtgggagaagcccagcgtgctcaagtccaaggcagagttgctgctgtcccagtgt
ccctggaaagagtacaagtcagacacaggcaaaccttactactataacaaccagagtaag
gagtctcgctggacccggcccaaggacctggatgacctggaggctctagtcaaacaggag
gctgcagggaaacagcagcagcagccccagatactgcagccgcagccgcctcagccccag
cctgagcccccgcctgggccgcccggccccacccctctgcccctgggccttctagagcct
gagccaggtgggagtgaagattgcgatatgtcagaggctgcccagcctgtggagcagggc
tttctgcagcagccggaggagggccccagcagtgctactggacagcatcagccaccacag
caggaggaagaggaatcaaagccagagccagagaggtctggcctcagttggagcaaccgg
gagaaggcaaagcaggccttcaaggagctgctgagggataaggctgtcccctccaatgcc
tcgtgggaacaggccatgaagatggtggtcaccgacccccgttacagtgccttgcccaaa
ctgagtgagaaaaagcaggcattcaatgcctacaaggcgcagcgggagaaggaagagaag
gaagaggcccggctaagggccaaggaggccaagcagaccttgcagcatttcctggagcag
cacgaacgcatgacctctaccacccgctaccggcgggcagaacagacctttggggagctg
gaggtgtgggctgtggtccctgagagggatcgaaaagaggtttatgatgatgtcctcttc
ttcctggccaagaaggagaaggaacaggccaagcagctccggcgccgcaacatccaggcc
ctgaagagcatcctggatgggatgagtagtgtcaacttccaaactacgtggtcccaggcc
cagcagtacctcatggataaccccagctttgctcaggaccaccagctgcagaacatggac
aaggaagatgcactgatctgcttcgaggagcacatccgagctttggagagggaggaggag
gaggagcgggagcgggcccgccttcgggagcggcgtcagcaacgcaagaaccgggaggcc
ttccagaccttcctggacgagctgcacgagacagggcagctgcactctatgtccacctgg
atggagctgtacccagctgtcagcactgatgtccgctttgccaacatgctgggccagccg
ggctccacccctctggacttgttcaagttctatgtggaggagttgaaggcacgattccat
gatgagaagaagatcattaaggacatccttaaggaccggggcttctgcgtggaggtgaac
acagcctttgaggacttcgcccacgtcataagctttgacaagagggctgctgcgctggac
gcaggcaacatcaagctgaccttcaacagtctgctggagaaagcagaggcgcgggagaga
gagcgggagaaggaggaggcgcgaaggatgcggcgcagggaggctgccttccgaagcatg
ctgaggcaggccgtgcctgccctggagctgggcactgcctgggaagaggtccgtgagcgc
tttgtgtgcgactcagcctttgagcagatcaccctggagtcggagcggatccggctcttc
cgggagttcctgcaggtactggagactgaatgccagcacctccacaccaaaggccgaaaa
cacggcagaaagggcaagaagcaccatcgaaagcgttcccactcgccctcattcccagac
ttgagggcttctggaggccagagaacctgtgcgctgacatgtgtctgccggtctgcccag
ggctctgagtcggaagaggaggagctgcccccaccgtctctccgaccccccaagcggaga
aggcggaacccctcggagtcaggctccgagccctcttcctcacttgattcggttgaaagt
gggggtgctgcccttggaggacggggctccccatccgctcgccttctccttggatcagat
catggccttcggaaagccaagaaaccaaaaaagaagactaagaagagaagacacaagtcg
aacagtcctgagagcgagacagaccctgaggagaaagctggcaaggagagtgatgagaaa
gaaccagaacaggacaaggacagggagctccggcgggcagaactccctaaccgctccccg
ggttttggaatcaagaaggagaagacgggctgggacacgtcggaaagtgagctgagcgag
ggggagctggaaaggcggcggcggacacttctgcagcagctggatgaccaccagtga
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