Ursus americanus (American black bear): 123794804
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Entry
123794804 CDS
T07931
Symbol
COL2A1
Name
(RefSeq) collagen alpha-1(II) chain isoform X1
KO
K19719
collagen type II alpha
Organism
uar
Ursus americanus (American black bear)
Pathway
uar04151
PI3K-Akt signaling pathway
uar04510
Focal adhesion
uar04512
ECM-receptor interaction
uar04974
Protein digestion and absorption
uar05165
Human papillomavirus infection
Brite
KEGG Orthology (KO) [BR:
uar00001
]
09130 Environmental Information Processing
09132 Signal transduction
04151 PI3K-Akt signaling pathway
123794804 (COL2A1)
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
123794804 (COL2A1)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
123794804 (COL2A1)
09150 Organismal Systems
09154 Digestive system
04974 Protein digestion and absorption
123794804 (COL2A1)
09160 Human Diseases
09172 Infectious disease: viral
05165 Human papillomavirus infection
123794804 (COL2A1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
uar00536
]
123794804 (COL2A1)
Glycosaminoglycan binding proteins [BR:
uar00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
123794804 (COL2A1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
COLFI
Motif
Other DBs
NCBI-GeneID:
123794804
NCBI-ProteinID:
XP_045657140
LinkDB
All DBs
Position
Unknown
AA seq
1418 aa
AA seq
DB search
MIRFGAPQTLVLLTLLVAAVLRCHGQDVRQPGPKGQKGEPGDIKDIVGPKGPPGPQGPAG
EQGPRGDRGDKGEKGAPGPRGRDGEPGTPGNPGPPGPPGPPGPPGLGGNFAAQMAGGFDE
KAGGAQMGVMQGPMGPMGPRGPPGPAGAPGPQGFQGNPGEPGEPGVSGPMGPRGPPGPPG
KPGDDGEAGKPGKSGERGPPGPQGARGFPGTPGLPGVKGHRGYPGLDGAKGEAGAPGVKG
ESGSPGENGSPGPMGPRGLPGERGRTGPAGAAGARGNDGQPGPAGPPGPVGPAGGPGFPG
APGAKGEAGPTGARGPEGAQGPRGEPGTPGSPGPAGASGNPGTDGIPGAKGSAGAPGIAG
APGFPGPRGPPGPQGATGPLGPKGQTGEPGIAGFKGEQGPKGEPGPAGPQGAPGPAGEEG
KRGARGEPGGAGPVGPPGERGAPGNRGFPGQDGLAGPKGAPGERGPSGLAGPKGANGDPG
RPGEPGLPGARGLTGRPGDAGPQGKVGPSGAPGEDGRPGPPGPQGARGQPGVMGFPGPKG
ANGEPGKAGEKGLPGAPGLRGLPGKDGETGAAGPPGPAGPAGERGEQGAPGPSGFQGLPG
PPGPPGEGGKPGDQGVPGEAGAPGLVGPRGERGFPGERGSPGAQGLQGARGLPGTPGTDG
PKGASGPAGPPGAQGPPGLQGMPGERGAAGIAGPKGDRGDVGEKGPEGAPGKDGGRGLTG
PIGPPGPAGANGEKGEVGPPGPAGAAGARGAPGERGETGPPGPAGFAGPPGADGQPGAKG
EQGEAGQKGDAGAPGPQGPSGAPGPQGPTGVTGPKGARGAQGPPGATGFPGAAGRVGPPG
SNGNPGPPGPPGPSGKDGPKGARGDSGPPGRAGDPGLQGPAGPPGEKGEPGDDGPSGPDG
PPGPQGLAGQRGIVGLPGQRGERGFPGLPGPSGEPGKQGAPGASGDRGPPGPVGPPGLTG
PAGEPGREGTPGADGPPGRDGAAGVKGDRGEAGAVGAPGAPGPPGSPGPAGPIGKQGDRG
EAGAQGPMGPAGPAGARGIPGPQGPRGDKGEAGEAGERGLKGHRGFTGLQGLPGPPGPSG
DQGASGPAGPSGPRGPPGPVGPSGKDGANGIPGPIGPPGPRGRSGETGPAGPPGNPGPPG
PPGPPGPGIDMSAFAGLGQREKGPDPLQYMRADQAAGDLRQHDAEVDATLKSLNNQIESL
RSPEGSRKNPARTCRDLKLCHPEWKSGDYWIDPNQGCTLDAMKVFCNMETGETCVYPNPA
NVPKKNWWSSKNKDKKHIWFGETINGGFHFSYGDDNLAPNTANVQMTFLRLLSTEGSQNI
TYHCKNSIAYLDEAAGNLKKALLIQGSNDVEIRAEGNSRFTYTVLKDGCTKHTGKWGKTL
IEYRSQKTSRLPIIDIAPMDIGGPEQEFGVDIGPVCFL
NT seq
4257 nt
NT seq
+upstream
nt +downstream
nt
atgatccgcttcggggctccccagacgctggtgctgctgacgctgctcgtcgccgctgtc
cttcgatgtcacggccaggatgtccggcaaccaggaccaaagggacagaaaggagaacct
ggagacatcaaggatatcgtaggacctaaaggacctcctgggcctcagggacctgccggt
gaacaaggacccagaggtgaccgtggtgacaaaggtgaaaagggtgcccctggacctcgt
ggcagagatggagagcctgggacccctggaaatcctggcccccctggtcctcctggcccc
cctggcccccctggccttggtggaaactttgctgcccagatggctggaggatttgatgag
aaggctggtggcgcccagatgggagtgatgcaaggaccaatgggccccatgggacctcga
ggacctccaggccctgcgggtgctcctggacctcaaggatttcaaggcaaccctggtgaa
cctggggaacccggcgtctctggtcccatgggtccccgtggtcctcctggcccccctgga
aaacctggtgatgatggcgaagctggaaagcctggaaaatctggtgaaaggggcccccct
ggccctcagggtgctcgcggcttcccgggaaccccaggccttcctggtgtcaagggtcac
agaggctacccaggtctagatggtgctaagggcgaagccggtgctccaggtgtgaaggga
gagagtgggtcacccggcgagaatggttccccaggccccatgggtccccgcggcctgccc
ggtgagcgaggacggaccggccctgctggtgccgctggtgcccggggcaacgacggccaa
ccaggccccgcaggccctccgggtcccgtgggtcctgccggcggtcctggcttccctggt
gctcccggggccaagggtgaagctggccccactggtgctcgtggtcccgaaggcgctcaa
ggtcctcgtggcgaacctggtactcctgggtcccccgggccggctggtgcctccggtaac
cccggaactgatggaattcccggagccaaaggatctgctggtgctcctggcattgctggt
gcccccggcttccctgggccccgtggtccacctggccctcaaggtgcaactgggcctctg
ggcccgaaaggtcagacgggcgagcctggcattgctggcttcaaaggtgaacaaggcccc
aagggagaacctggccctgctggtccccaaggagcccctggtcctgctggtgaagaaggc
aagagaggtgcccgtggagagcctggtggcgctgggcccgttggtccccccggagagaga
ggtgctcctggcaaccgtggtttcccaggtcaggatggtctggcaggtccaaagggagcc
cctggagagcgagggcccagcggccttgctggtcccaaaggagccaacggtgaccctggc
cgtcctggagagcctggccttcctggagcccggggtctcactggtcgccctggtgatgct
ggtcctcaaggcaaagttggtccttctggagctcctggtgaagacggtcgccctggtcct
ccaggtcctcagggcgctcgtgggcagcctggtgtcatgggtttccctggccccaaaggt
gccaacggcgagcctggcaaggctggtgagaagggactgcccggcgctcctggtctgaga
ggtcttcctggcaaagacggtgagacaggtgctgcaggaccccccggacccgccggacct
gctggtgaacgaggcgagcagggtgctcctgggccatctgggttccagggacttcctggc
cctcctggtcccccaggcgaaggtggaaaaccaggtgaccagggcgttcccggtgaagct
ggagcccccggcctcgtgggtcccaggggcgaacgaggtttcccaggcgaacgtggctct
cccggggcccagggacttcagggtgcccgtggcctccccggcactcctggcacggacggt
cccaaaggcgcatctggcccagctggcccccctggggctcagggccctccaggtctgcaa
gggatgcccggtgagagaggagcagctggcattgctgggcccaagggagacaggggtgat
gttggtgagaaaggccccgagggagcccctggaaaggatggtggacgaggcttgactggt
cccattggcccccctggtcccgctggtgccaatggtgagaagggagaagttggacctccc
ggtcctgcaggagctgctggtgctcgcggcgccccgggtgaacgcggagagactggaccc
cccgggcccgctggattcgcaggtcctcccggtgctgacggccaaccaggtgccaagggt
gagcaaggagaggctggccagaaaggtgatgctggtgccccgggtcctcagggcccctct
ggagctcccgggcctcagggtcctactggtgtgactggtcctaaaggagcccgaggtgct
caaggccccccgggagccaccggattccctggagctgctggccgcgtcggacccccaggc
tccaatggaaaccctgggccccctggtccccctggtccttctggaaaagatggtcccaaa
ggtgctcgaggagacagcggcccgcctggccgtgccggtgaccctggcctccaaggtcct
gctggaccccctggcgagaagggagaacctggagatgatggtccctctggtcccgatggt
cctccaggtccccaaggtctggctggtcagaggggcatcgtcggtctgcccgggcagcgt
ggtgagagaggattccctggcttgcccggcccatcgggtgagcctggcaagcagggagct
cctggtgcatctggagaccgaggtccccccggccccgtgggtcctcctggcctgaccggt
cctgctggcgaacctggacgagagggaacccctggtgctgatggtccccctggcagagat
ggtgccgctggagtcaagggtgatcgtggtgaggctggtgctgtgggtgcccccggagcc
cccgggccccctggctctcctggccccgctggcccaattggaaagcagggagaccgagga
gaagctggcgcacaaggccccatgggtcccgcaggaccggctggagcccggggaatccca
ggccctcaaggtccccggggtgacaaaggagaagctggagaggctggcgagagaggactg
aagggacaccgtggcttcaccggtctgcagggtctgcccggccctcctggtccttctgga
gaccaaggtgcttctggtcctgctggtccttctggccctagaggtcctcctggtcccgtc
ggtccctccggcaaagatggtgctaatggaatccctggtcccatcggacctcctggtccc
cgtggacgttcaggcgaaactggccccgcgggtcctcctggaaaccccggacctcctggc
cctccaggaccccctggccctggcatcgacatgtctgcctttgctggccttggccagaga
gagaagggccctgaccccctgcagtacatgcgggctgaccaggcagccggcgacctgaga
cagcatgatgccgaggtggacgccacgctcaagtccctcaacaaccagattgagagcctc
cgcagccccgagggctcccgcaagaaccccgctcgcacctgccgggacctgaaactctgc
caccctgaatggaagagcggagactactggattgaccccaaccagggctgcaccttggac
gccatgaaggttttctgcaacatggagactggcgagacctgcgtctaccccaacccagcg
aacgttcccaagaagaactggtggagcagcaagaacaaggacaagaaacacatctggttt
ggagaaaccatcaatggtggcttccacttcagctacggtgatgacaacctggctcccaac
actgccaacgtccagatgaccttcctgcgcctgctgtccaccgagggctcccagaacatc
acctaccactgcaagaacagcatcgcctacctggacgaagccgccggcaacctcaagaag
gccctgctcatccagggctccaatgacgtggagatccgggccgagggcaacagcagattc
acgtacaccgtcctgaaggatggctgcacgaaacacaccggtaagtggggcaagactctg
atcgagtaccggtcacagaagacctcgcgcctccccatcattgacattgcgcctatggac
ataggagggcccgagcaggaatttggtgtggacatagggcctgtctgcttcttgtaa
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integrated database retrieval system
