Ursus americanus (American black bear): 123794825
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Entry
123794825 CDS
T07931
Symbol
ARID2
Name
(RefSeq) AT-rich interactive domain-containing protein 2 isoform X2
KO
K11765
AT-rich interactive domain-containing protein 2
Organism
uar
Ursus americanus (American black bear)
Pathway
uar03082
ATP-dependent chromatin remodeling
uar05225
Hepatocellular carcinoma
Brite
KEGG Orthology (KO) [BR:
uar00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
123794825 (ARID2)
09160 Human Diseases
09162 Cancer: specific types
05225 Hepatocellular carcinoma
123794825 (ARID2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
uar03000
]
123794825 (ARID2)
03021 Transcription machinery [BR:
uar03021
]
123794825 (ARID2)
03036 Chromosome and associated proteins [BR:
uar03036
]
123794825 (ARID2)
Transcription factors [BR:
uar03000
]
Eukaryotic type
Helix-turn-helix
ARID
123794825 (ARID2)
Transcription machinery [BR:
uar03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
123794825 (ARID2)
Chromosome and associated proteins [BR:
uar03036
]
Eukaryotic type
Chromatin remodeling factors
PBAF complex
123794825 (ARID2)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ARID
RFX_DNA_binding
TSTD2_N
Motif
Other DBs
NCBI-GeneID:
123794825
NCBI-ProteinID:
XP_087711917
LinkDB
All DBs
Position
25:37865398..38024988
Genome browser
AA seq
1874 aa
AA seq
DB search
MANSTGKAPPDERRKGLAFLDELRQFHHSRGSPFKKIPAVGGKELDLHGLYTRVTTLGGF
AKVSEKNQWGEIVEEFNFPRSCSNAAFALKQYYLRYLEKYEKVHHFGEDDDEVPPGNPKP
QLPIGAIPSSYNYQQHSVSDYLRQSYGLSMDFNSPNDYNKLVLSLLSGLPNEVDFAINVC
TLLSNESKHVMQLEKDPKIITLLLANAGVFDDTLGSFSTVFGEEWKEKTDRDFVKFWKDI
VDDNEVRDLISDRNKSHEGTSGEWIWESLFHPPRKLGINDIEGQRVLQIAVILRNLSFEE
GNVKLLAANRTCLRFLLLSAHSHFISLRQLGLDTLGNIAAELLLDPVDFKTTHLMFHTVT
KCLMSRDRFLKMRGMEILGNLCKAEDNGVLICEYVDQDSYREIICHLTLPDVLLVISTLE
VLYMLTEMGDVACTKIAKVEKSIDMLVCLVSMDIQMFGPDALAAVKLVEHPSSSHQVLSE
IRPQAVEQVQTQTHVASAPASRAVVAQHVAPPPGIVEIDSEKFACQWLNAHFEVNPDCSV
SRAEMYSEYLSTCSKLARGGILTSTGFYKCLRTVFPNHTVKRVEDSSSNGQAHIHVVGVK
RRAIPLPIQMYYQQQPVSTPVVRVDSVPDVSPSPSPAGIPHGPQTVGNHFQRTSVTNQSS
NLTATQMSFPVQGVHTVAQTVSRIPPNPAVHTHQQQNAPVTVIQNKAPIPCEVVKATVIQ
NSISQTAVPVSIAVGGGAAQSSVVQNHSTGPQPVTVVNSQTLLHHPSVIPQQSPLHTVVP
GQIPSGTPVTVIQQAVPQSHIFGRVQNIPACTSTVSQGQQLITTSPQPVQTSSQQTSAGS
QPQDTVIIAPSQYVTTSASNIVSATSVQNFQVATGQMVTIAGVPSPQPSRVGFQNIAPKP
LPSQQVSSTVVQQPIQQPQQPTQQSVVIVSQPAQQGQTYAPAIHQIVLANPAALPAGQTV
QLTGQPNITPSSSPSPVPATNNQVPTAMSSSSTPQSQGPPPTVSQMLSVKRQQQQQHSPA
PSPQQVQVQVQQPQQVQMQVQPQQANAGVGQPASGESSLIKQLLLPKRGPSTPGGKLILP
APQIPPPNNARAPSPQVVYQVANNQAAGFGVQGQSSAQQLLVGQQNVQLVQSAMPPTGGV
QTVPISNLQILPGPLISNSPATIFQGTSGNQVTITVVPNTSFATATVSQGNATQLIAPAG
ITMSGTQAGVGLQVQTLPATQTSPAGQSSCTTATPPFKGDKIICQKEEEAKEATGLHVHE
RKIEVMENPSCRRGTTNTSNGDAKENEMQVGSLLNGRKYSDSSLPPSNSGKIQSEANQCS
LISNGPSLELGENGTSGKQNSEQMDMPDIKSDLKKPLVNGICDFDKGDGSHLSKNIPNHK
TSNHVGNGEISPMEPQGTLDATQQDTAKGDQLERISNGPILTLGGSPSVSSIQEAPNVAT
QQFSGTDLPNGPLASSLNSDVPQQRPSVVVSPHSTTSVIQGHQIIAVPHSGSRVSHSPAL
SSDVRSTNGTAECKTVKRPAEDNDRETVTGIPNKVGVRIVTISDPNNAGCSATMVAVPAG
ADPSTVAKVAIESAVQQKQQHPPPYVQNVVPQGSGDVKEGPGPQGRTFRLSECSGLERLQ
GSVPAENGQQNTPMTPSPAVQVQSQPNTSQPSPFSASSQQGDPVRKPGHNFMCLWQSCKK
WFQTPSQVFYHAATEHGGKDVYPGQCLWEGCEPFQRQRFSFITHLQDKHCSKDALLAGLK
QDEPGQVGSQKSSTKQPAVGGTSSTPRAQKAIVNHPSAALMALRRGSRNLVFRDFTDEKE
GPITKHIRLTAALILKNIGKYSECGRRLLKRHENNLSVLAISNMEASSTLAKCLYELNFT
VQSKEQEKDSEMLQ
NT seq
5625 nt
NT seq
+upstream
nt +downstream
nt
atggcaaactcgacggggaaggcgcctccggacgagcggagaaagggactcgctttcctg
gacgagctgcggcagttccaccacagcagagggtcgccttttaaaaaaatccctgcggtg
ggtgggaaggagctggatcttcacggtctctacaccagagtcactactttaggcggattc
gcgaaggtttctgagaagaatcagtggggagaaattgttgaagagttcaactttcccaga
agttgttctaacgctgcctttgctttaaaacagtattacttgcgttacctagaaaagtac
gagaaagttcatcattttggggaggatgatgatgaggtaccaccaggcaatccaaagcca
cagcttcctattggtgcaattccatcttcctacaattaccagcaacacagtgtgtcagat
tatctgcgtcaaagttatgggctatctatggacttcaattcgccaaatgattataataaa
ttggtgctttcactgttatctggactcccaaatgaagtggactttgctattaatgtatgc
actcttctatcaaatgaaagcaagcacgtcatgcaacttgaaaaagaccctaaaatcatc
actttattacttgctaatgccggggtgtttgatgacactttaggatccttttctactgta
tttggtgaagaatggaaggagaagactgatagagatttcgttaagttttggaaagacatt
gttgatgataatgaagtacgtgacctcatttctgacagaaacaagtctcatgaaggtaca
tcaggagaatggatttgggaatctttatttcatccacctcgaaagctgggcattaatgat
attgaaggacaacgggtacttcagattgcagtgatcttgcgaaatctttcctttgaagag
ggcaatgttaagctcttggcagctaatcgtacctgtcttcgtttcctattactttctgca
catagtcattttatttctctaaggcaattaggccttgacacattaggaaatattgcagcc
gagcttctattggaccctgtcgatttcaaaactactcatctgatgtttcatactgttaca
aaatgcctaatgtcaagggatagatttttaaaaatgaggggcatggaaattttgggaaat
ctttgcaaagcagaagataatggtgttttgatttgtgaatatgtcgatcaggactcatac
agagagatcatttgtcatctcactttacctgatgtgctgctcgtaatctcaacactcgag
gtgctatatatgctcacagaaatgggagatgttgcttgcacaaaaattgcaaaagtagaa
aagagcatagacatgttagtgtgtctggtctctatggatattcagatgtttgggcctgat
gcactagctgcagtaaaactcgtcgaacatccaagttccagtcatcaagttttatctgaa
attaggccacaagctgtagaacaagtccaaacccagacccatgtagcatctgccccagct
tccagagcagttgtagcacagcatgttgctccacctccaggaatagtggaaatagatagt
gagaagtttgcttgtcagtggctaaatgctcattttgaagtaaatccagattgttctgtc
tctcgagcagaaatgtattctgagtacctctcaacgtgcagtaaattagctcgtggtgga
atcctaacttcaactggattttataaatgtcttagaacggtctttccaaatcatacagtg
aagagagtggaggattccagtagcaacgggcaggcacatattcacgtagtaggagtaaaa
cggagggctataccacttcccattcagatgtactatcagcagcaaccagtttctactcct
gttgttcgtgttgattctgtccctgatgtatctccaagtccttcacctgcaggaatccct
catggaccacaaactgtaggaaaccattttcagaggacttctgttaccaaccaatcttca
aatttgactgcaacacaaatgtcttttccagtacaaggcgttcatactgtggcacagact
gtttcaagaattccaccaaatcctgcagttcatacccaccagcagcaaaatgctccagtg
actgtcattcaaaataaagctccaattccgtgtgaagttgttaaggctacagtaatccag
aattctatatcccagacagcagttcctgttagcattgctgtgggaggaggagctgctcag
agttctgtggttcagaatcacagtacagggccacaacctgttacagttgtaaattcccag
acattgcttcatcatccatctgtaattccacaacagtctccattacacacagtggtacca
ggacagataccttccggcactcctgttacagtaattcagcaagctgtcccccagagtcat
atatttggcagagtacagaacataccagcatgtacttctacagtttcacagggtcaacag
ttaatcaccacatcaccccaacctgtgcaaacttcatctcaacagacatcagctggtagt
cagccgcaagacactgttatcatagcaccttcacagtatgtgacaacttctgcatccaat
attgtctcagcaacgtccgtgcagaattttcaggtagctacgggacaaatggttaccatt
gctggtgtcccaagtccacaaccctcaagggtaggatttcagaacattgcaccaaaacct
ctcccttctcagcaagtttcatcaacagtggtacaacagcccattcagcaaccacagcag
ccaacccaacaaagtgtagtgattgtaagccagccagctcaacaaggtcaaacttatgca
ccagccattcaccaaattgttcttgctaatccagcagctcttccagctggtcagacagtt
cagctaactgggcaaccaaacataactccatcttcctcaccatcacctgtcccagctact
aataaccaagtccccactgccatgtcatcttcttccacccctcagtcacagggaccacct
cctactgtcagtcagatgctatctgtgaaaaggcagcaacagcagcagcattcaccagca
ccctcaccacaacaggtacaagtacaggttcagcagccccaacaagtacagatgcaagtt
cagccacagcaggcgaatgcaggcgttggtcagcctgcttctggtgagtcaagtctgata
aaacagctgctgcttccaaagcgtggtccttcgacaccaggtggtaagctaattctccca
gctccacagattcctcctcctaataatgcaagagctcctagcccccaggtggtataccag
gtagccaataaccaagcagcaggttttggagtgcaggggcaatcttcagctcagcagcta
ttggttgggcagcaaaatgttcagttggtccaaagtgcaatgccacccacagggggagtg
caaactgtgcccatctcgaacttacaaatattgccaggcccactgatttcgaacagccca
gcaaccattttccaagggacttctggcaaccaggtaaccataacagttgtgccaaataca
agttttgcaactgcaactgtcagtcagggaaatgcaactcagctcattgctccagcagga
attaccatgagtgggacgcaggcaggagttggacttcaggtgcaaacgcttccagccact
cagacatctccagctggacaatcatcctgtactactgctactcccccattcaaaggtgat
aagataatttgccaaaaggaggaggaagcaaaagaagcaacaggtttacatgttcatgaa
cgtaaaattgaagtcatggagaacccatcctgccgacgaggaaccacgaacaccagcaat
ggggatgcaaaggaaaatgaaatgcaggtgggaagtcttttaaatgggagaaagtacagt
gactcaagtctacctccttcaaactcagggaaaattcaaagtgaggctaatcagtgctca
ctaatcagtaatgggccatcattagaattaggtgagaatggaacatctggaaaacagaac
tcagaacaaatggatatgccggatatcaaaagtgatttgaaaaaacctctagttaatgga
atctgtgattttgataagggagatggttctcatttaagcaaaaacattccaaatcacaaa
acttccaatcatgtaggaaatggtgagatatctccgatggaaccacaagggactttagat
gccactcagcaagatactgccaaaggtgatcaactagaaagaatttctaatggacctata
ttaactttgggtggttcaccatctgtgagcagtatacaggaggctcctaatgtggcaaca
cagcagtttagtggtactgacttgcctaatggacctctagcttcaagtttaaattcagac
gtgcctcagcaacgcccaagtgtagttgtctcaccacattctacaacctctgtcatacag
gggcatcaaatcatagcagttccccactcaggatcaagagtgtcccattctcctgcccta
tcatctgacgttcggtctacaaatggcacagcagaatgcaaaactgtaaagaggccggca
gaggataacgatagggaaacagtcacaggaattccaaataaagtaggagttagaattgtt
acaatcagtgaccccaacaatgctggctgcagtgcaacaatggttgccgtgccagcagga
gcagatccaagcactgtagctaaagtagcaatagaaagtgctgttcagcaaaagcagcag
catccaccaccgtacgtacagaatgtggtcccacaggggtctggggatgttaaggagggt
cctggaccccaaggaaggactttcagactttcagaatgttcagggctggaaagactgcag
ggaagtgtccctgctgagaatggccaacagaacactcctatgacgccttcaccagctgtg
caagtgcagagccaacctaacacttcccagccttctccattcagtgcatctagtcaacaa
ggggatccagtgagaaaacctggacacaacttcatgtgtctgtggcagtcttgtaaaaag
tggtttcagacaccctcacaggttttctaccatgcagcaactgaacacggaggcaaagat
gtgtatccagggcagtgtctttgggaaggttgtgagccttttcagcgacagaggttttct
tttattacccacttacaggataagcactgttcaaaagatgccctgcttgcaggattaaaa
caagatgaaccaggacaagtgggaagtcaaaaatcttctaccaagcagcctgctgtaggg
ggcacaagctcaactcctagagcacagaaggccattgtgaatcatcccagtgctgctctt
atggctcttaggagaggatcaagaaaccttgtctttcgagattttacagatgaaaaagag
ggaccaataactaaacacatccgactaacagctgccttaatattaaaaaatattggtaaa
tattcagaatgtggtcgcagattgttaaagagacatgaaaacaacttatcagtgctagcc
attagtaacatggaagcttcctccacccttgccaaatgcctttatgaacttaattttaca
gttcagagtaaagaacaagaaaaagactcagaaatgctgcagtga
DBGET
integrated database retrieval system
