Ursus americanus (American black bear): 123794872
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Entry
123794872 CDS
T07931
Symbol
ATRX
Name
(RefSeq) transcriptional regulator ATRX isoform X1
KO
K10779
transcriptional regulator ATRX
Organism
uar
Ursus americanus (American black bear)
Pathway
uar04110
Cell cycle
Brite
KEGG Orthology (KO) [BR:
uar00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
123794872 (ATRX)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
uar03000
]
123794872 (ATRX)
03036 Chromosome and associated proteins [BR:
uar03036
]
123794872 (ATRX)
Transcription factors [BR:
uar03000
]
Eukaryotic type
Zinc finger
Cys4 GATA-factors
123794872 (ATRX)
Chromosome and associated proteins [BR:
uar03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
123794872 (ATRX)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
ADD_ATRX
Helicase_C
Motif
Other DBs
NCBI-GeneID:
123794872
NCBI-ProteinID:
XP_045657261
LinkDB
All DBs
Position
Unknown
AA seq
2501 aa
AA seq
DB search
MSCSPSDVLPQANFRSFSSESKLNTLVQKLHDFLAHSSEDSEETSSPPRLVMNQSTEKVS
GSGNNSDMMENSKEEGASSSEKSKSSGSSRSKRKPSIVTKYVESDDEKPLDETVNEDASN
ENSENDITMQSLPKGTVIVQPEPVLNEDKDDFKGPEFRSRSKMKTENLKKRGEDGLHGIV
SCTACGQQVNHFQKDSIYRHPSLQVLICKNCFKYYMSDDISRDSDGMDEQCRWCAEGGNL
ICCDFCHNAFCKKCILRNLGRKELSTIMDENNQWYCYICHPEPLLDLVTACNSVFENLEQ
LLQQNKKKIKVDNEKSNKVYDHTPRFSPKKNSSSCNGEEKKLDDSCSGSVTYSYSALIVP
KEMIKKAKKLIETTTNMNSSYIKFLKQAADNSETNSATKLRQLKAFKSVLADIKKAHLAL
EEDLNSEIRALDAVNKEKNTKEHKVIDAKSETKVRKGEKPCALERKDISKSEVKLARKQV
DSEHMDQSITVQEQRANKSASGEHKKSDKKEEPQYEPANTSEDLDMDIVSVPSSVPEDIF
ENLETAMEVQSSADNQGDGNSGTEQELESSSVKLNITSKDNRRGIKSKTTAKVTKELYVK
LTPVSLSNSPIKGADCQEVPQDKDGYKSSGLNPKPENCGLGQEKNDNEHLFESEVPLLSE
ESDLRRSPRVKTTPLRRQTETNPATSNSDEESNETVKEKQKLSVPMRKKDKRNSSDSAID
NPKPNKLPKSKQSEIVDQNSDSDEMLAILKEVSRMSHSSSSDTDINETHTNHEKTLYDLK
SQTGKDDKGKRKRKSSTSGSDYDIKKGKSAKRSIISKKKRQNQSESSNYDSELEKEIKSM
SKIGAARTTKKRVPNKEDYDSSEDEKHRKKGMDNQGQKNVKTAQEGSSDDAERKQERDNF
SSVEGPVDKDRTNMDLRDRISKKQQSGVSSDGADKLPSGKEESSNSPEDKKVAETKEKSK
HLKTKSSKKVQAGLSDIAENFPKKEQSDESSEDDKKQSKKGTEVKEKKTTDLKKNVIKIE
QQYESSSDSTEKLPEGEEISRFPKGMKQNKNDTTHGEKKSKKIKDKTSKKKDEVSDNAEK
LQGKRDSCDSSEDKRSKNGASGRVKKRCNLPEKSSRKKQDCSSSDTEKYSMKEDGCDSSD
KRLKRIELRERRNLNSKRNTKEIHSGSSSSDGEESSEDNKKLKKQRTSAKKKTVSVKEKM
RNSLRTSTKRKQADITSSSSSDIGDDDQNSVGEGSSDEQKIKPVTENLVLSSHTGFCQSS
GDEALSKSVPVTVDDDDDDNDPENRIAKKMLLEEIKANLSSDEDGSSDDEPEEGKKRTGK
HNEENPGDEEAKNQVNFESDSDSEESKKPRYRHRLLRHKLTVSDGESGEEKKMKPKEHKE
AKGRNRRKVSSEDSEDSDFQESGVSEEVSESEDEQRPRTRSAKKAELEENQRSYKQKKKR
RRIKVQEDSSSENKSNSEEDKEEEEEEEEEDEDENDDSKSPGKGRKKIRKILKDDKLRTE
TQNALKEEEERRKRIAEREREREKLREVIEIEDASPTKCPITTKLVLDEDEETKEPLVQV
HRNMVIKLKPHQVDGVQFMWDCCCESVKKTKKSPGSGCILAHCMGLGKTLQVVSFLHTVL
LCDKLDFSTALVVCPLNTALNWMNEFEKWQEGLKDDEKLEVSELATVKRPQERSYMLQRW
QEDGGVMIIGYEMYRNLAQGRNVKSRKLKEIFNKALVDPGPDFVVCDEGHILKNEASAVS
KAMNSIRSRRRIILTGTPLQNNLIEYHCMVNFIKENLLGSIKEFRNRFINPIQNGQCADS
TMVDVRVMKKRAHILYEMLAGCVQRKDYTALTKFLPPKHEYVLAVRMTPIQCKLYQYYLD
HLTGVGNSSEGGRGKAGAKLFQDFQMLSRIWTHPWCLQLDYISKENKGYFDEDSMDEFIA
SDSDETSMSLSSDDYTKKKKTKGKKGKKDSSSSGSGSDNDVEVIKVWNSRSRGGGEGNVD
ETGSNPSVSLKLEESKATSSSNPSSPAPDWYKDFVTDADAEVLEHSGKMVLLFEILRMAE
EIGDKVLVFSQSLISLDLIEDFLELASREKTEDKDKPLIYKGEGKWLRNIDYYRLDGSTT
AQSRKKWAEEFNDETNVRGRLFIISTKAGSLGINLVAANRVIIFDASWNPSYDIQSIFRV
YRFGQTKPVYVYRFLAQGTMEDKIYDRQVTKQSLSFRVVDQQQVERHFTMNELTELYTFE
PDLLDDPNSEKKKKRDTPMLPKDTILAELLQIHKEHIVGYHEHDSLLDHKEEEELTEEER
KAAWAEYEAEKKGLTMRFNIPTGTNLPPVSFNSQTPYIPFNLGALSAMSNQQLEDLINQG
REKVVEATNSVTAVRIQPLEDIISAVWKENMNLSEAQVQALALSRQASQELDVKRREAIY
NDVLTKQQMLISCVQRILMNRRLQQQYNQQQQQQMTYQQATLGHLMMPKPPNLIMNPSNY
QQIDMRGMYQSVAGGMQPPPLQRAPPPMRSKNPGPSQGKSM
NT seq
7506 nt
NT seq
+upstream
nt +downstream
nt
atgagctgcagcccatctgatgtacttccacaagcaaacttcaggtctttttcaagtgaa
agcaagttgaatacattggtgcagaagcttcatgacttcctggcacactcatcagaagat
tctgaagaaacaagttctcctccaagacttgtgatgaaccaaagcacagaaaaagtcagt
ggttctggaaataactcagatatgatggaaaacagcaaggaagagggagctagctcttca
gaaaaatccaaatcatcaggatcatcacgatcaaaaaggaaaccttcaattgtaacaaag
tatgttgaatctgatgatgaaaaacctttggatgaaactgtaaatgaagatgcttctaat
gaaaattcagaaaatgatattactatgcaaagcttgccaaaaggtacagtgattgtacaa
ccagagccagtgctgaatgaagacaaagatgattttaaagggcctgaatttagaagcaga
agtaaaatgaaaactgaaaatctcaaaaaacgcggagaagatgggcttcatgggattgtg
agctgcacagcttgtggacagcaggtcaatcattttcaaaaagattccatttatagacat
ccttcactgcaagtacttatttgtaagaattgctttaaatattacatgagtgatgatatt
agccgtgactctgatggaatggatgaacaatgtaggtggtgcgcagaaggtggaaacttg
atttgttgcgacttttgccataatgccttctgcaagaaatgcattctgcgcaaccttggt
cgaaaggagctctctacaataatggatgaaaacaaccagtggtattgctacatatgtcac
ccagaacctttgttggacttggtcactgcatgtaatagcgtatttgaaaatttagaacag
ttgttgcaacaaaataagaagaagataaaagttgacaatgaaaagagtaataaagtatat
gaccatacacccagattttctccaaagaaaaatagttccagttgtaatggagaagaaaag
aaattagatgattcatgttctggttcagtaacctactcttattcagcactaattgtgccc
aaagagatgattaagaaggcaaaaaaactgattgagaccacaactaacatgaactccagt
tacatcaagtttttgaagcaggcagcagataattcagaaaccaattctgctacaaagtta
cgccagcttaaggcttttaaatctgtgttagctgatatcaagaaagctcatcttgcatta
gaagaagatttgaattcagagattcgagctttggatgctgtaaacaaagagaaaaatacc
aaagagcataaggtcatagatgctaagtctgaaacaaaagtacgaaaaggagaaaaaccc
tgtgctttagaaagaaaagatatttcaaaatcagaagttaaactggcaagaaagcaggtg
gatagtgagcacatggatcagagtattacagtacaggaacaaagagcaaataaaagcgcc
agtggtgaacataagaaatctgataaaaaagaagaacctcagtatgaacctgctaacact
tccgaagatttagacatggatattgtttctgttccttcctcagttccagaagacattttt
gagaatcttgagacagctatggaagttcagagttcagcagataatcagggagatggcaat
agtggaactgagcaagaactggagagttcttctgtaaaattaaatattacttcaaaagac
aacagaagaggtattaagtcaaaaactacagctaaagtaacaaaagaattatatgttaaa
ctcacccctgtttccctttctaattctccaattaaaggtgctgattgtcaggaagtacca
caagacaaagatggctataaaagttctggtctgaaccccaagccagagaactgtggactt
ggacaggaaaagaatgataatgagcatttgtttgaaagtgaagttccattactttcagaa
gaatctgatctccgaagatctccacgtgtaaagactactcccttgaggcgacagacagaa
accaatcctgcaacatctaattcagatgaagaaagtaatgaaacagttaaggagaaacaa
aaactatcagttccaatgagaaaaaaggataagcggaattcttctgacagtgctatagat
aatcctaaacctaataaattgcctaaatctaagcagtcagagattgtggatcagaattca
gattctgatgaaatgttagcaatcctcaaagaggtatccaggatgagtcacagttcttct
tcagatactgatattaatgaaactcatacaaatcacgagaagactttatatgatttaaag
agtcaaacagggaaagatgataaaggaaaacggaaacgaaaaagttctacttctggctca
gattatgatattaaaaaaggtaaatcagctaaaaggtctataatttctaaaaagaaacga
caaaaccagtctgaatcttccaattatgactcagaattagaaaaagagataaagagcatg
agtaaaattggggctgccagaacaaccaaaaaaagagttccaaataaagaagattatgat
tcttctgaagatgaaaaacacagaaaaaagggaatggataatcaagggcagaaaaatgtg
aagactgcacaagaaggatcatctgatgatgctgaaaggaaacaagagagagataatttc
tcttcagtagaaggcccagttgataaagacaggaccaacatggacttaagagatcgaatc
tctaagaagcagcagtcaggtgtttcttctgatggtgctgataagctgccttcagggaaa
gaggagagttctaattctccagaagacaaaaaggttgctgaaactaaagaaaagagtaag
cacttgaaaaccaaatcgagtaagaaagtacaggctggcttatctgacattgctgagaat
ttcccaaagaaagagcagagtgatgaatcatctgaagatgataaaaagcagagcaaaaag
ggaactgaagtaaaagaaaagaaaactacggacttgaagaaaaatgtaattaagatagaa
caacagtatgaatcatcatctgatagcaccgagaaattacccgagggagaagaaatttct
cgttttcctaaaggcatgaaacaaaataagaatgacacgactcatggagaaaagaaaagt
aaaaaaataaaagataaaacttctaaaaagaaggatgaagtatccgataatgctgagaaa
ttacagggaaaaagagatagttgtgattcttcggaagataaaaggagtaagaatggggca
tccggtagagtgaagaaaagatgcaacttgcctgaaaagagttcaaggaagaaacaagat
tgttcgtcatctgatactgagaaatactccatgaaagaagatggttgtgattcttctgat
aagagactgaaaagaatagaactgagggaaagaagaaatttaaattcaaagagaaatacc
aaggaaatacatagtggctcatcatcttctgatggtgaggaaagttctgaagataataaa
aagctgaagaaacagagaacttcagctaaaaagaagacagtcagtgtcaaggagaaaatg
agaaactccctaagaacaagcactaaaaggaagcaagctgatattacatcatcatcatct
tctgatataggagatgatgatcagaattctgtgggcgaggggagcagtgatgagcagaaa
attaagcctgtgactgaaaatttagtgctgtcttcacatactggattttgccaatcttca
ggagatgaagccttatctaaatcagtacctgtcacagtggatgatgacgacgacgacaat
gatcctgagaatagaattgccaagaagatgcttttagaagaaattaaagccaatctttcc
tctgatgaggatggatcttcagatgatgaaccagaagaagggaaaaaaagaactggaaaa
cacaatgaagaaaatccaggagatgaggaagcaaaaaatcaagtcaattttgaatcagat
tcagattctgaagaatctaagaagccaagatacagacataggcttttgaggcacaaactc
actgtgagtgatggagaatctggagaagaaaaaaagatgaagcctaaagaacacaaagaa
gccaaaggcagaaatagaaggaaagtgagcagtgaagattctgaagattctgatttccag
gaatcaggagttagtgaagaagttagtgaatctgaagatgaacaacggcccagaacaagg
tctgcaaagaaagcagagttggaagaaaatcagcggagttataaacagaaaaagaaaagg
cgacgtattaaggttcaagaagactcatctagtgaaaacaagagtaattctgaagaagat
aaagaagaagaggaagaggaagaggaagaagatgaagatgaaaatgatgattccaagtct
cctggcaaaggcagaaagaaaattagaaagattcttaaagatgataaactaagaactgag
acacaaaatgctcttaaggaagaggaagagaggcgaaaacgtattgctgagagggaacgt
gagcgagaaaaattgagagaggtgatagaaattgaagatgcttcacccaccaagtgtcca
ataacaaccaagttggttttagatgaagatgaagaaaccaaagaacctttagtgcaggtt
catagaaatatggttatcaaattgaaaccacatcaagtagatggtgttcagtttatgtgg
gattgctgctgtgaatctgtaaaaaaaacaaagaaatctccaggttcaggatgcattcta
gcacactgcatgggccttggtaagactttacaggtggtaagttttcttcatacggttctt
ttgtgtgacaaattggatttcagtacagctttggtggtttgtcctcttaataccgctttg
aattggatgaatgaatttgagaagtggcaagagggattaaaagatgatgaaaagcttgag
gtctctgaattagcaactgtgaaacgtcctcaggagagaagctacatgctgcagaggtgg
caagaagatggtggtgttatgatcataggctatgagatgtacagaaatcttgctcaagga
aggaatgtgaagagtaggaagttgaaggaaatctttaacaaagctttggttgatccaggc
cctgactttgttgtttgtgatgaaggtcatattttgaaaaatgaagcatctgctgtttca
aaagctatgaattctatacggtcaaggaggaggattattttaacaggaacaccacttcaa
aataacctaattgagtatcattgcatggttaactttatcaaggaaaatttgctgggatcc
attaaggagttcaggaatcggtttataaatccaatccaaaatggtcagtgcgcagattct
accatggtagatgtcagagtgatgaaaaagcgtgctcacattctctatgagatgttagct
ggatgtgttcagaggaaagattatacagcattaacaaagttcttgcctccaaaacatgaa
tatgtactagctgtgagaatgactcctattcagtgcaagctctatcagtactacttagat
cacttaacaggtgtaggtaatagcagtgaaggtggaagaggaaaggcaggtgcaaaactt
ttccaagattttcagatgttaagtagaatctggactcatccttggtgtttgcagctggac
tacattagcaaagaaaataagggatactttgatgaagacagtatggatgaatttatagct
tcagattccgatgaaacctccatgagtttaagctccgatgattatacaaaaaagaagaaa
acaaaggggaaaaaagggaaaaaagatagtagctcaagtggaagtggcagtgacaatgat
gttgaagtgattaaagtctggaattcaagatctcgaggaggtggtgaaggaaatgtggat
gaaacaggaagcaatccctcagtttcattaaagctggaagaaagtaaagctacttcctct
tctaatccaagcagcccagctccagactggtacaaagattttgttacagatgctgatgct
gaggttttagaacattctggaaaaatggtacttctttttgaaattcttcgaatggcagag
gaaattggggataaagtccttgttttcagccagtctctcatatctctggacttgattgaa
gattttcttgaattggccagtagggaaaagacagaagataaagataaacctcttatttat
aaaggtgaagggaagtggctgcgaaacattgactattaccgtttagatggttctactact
gcacaatcaaggaaaaaatgggctgaagaatttaatgatgaaactaatgtgagaggacga
ttgtttatcatttccaccaaagcaggatctcttggaattaatctggtagctgctaatcga
gtgattatatttgatgcttcttggaatccatcttatgacatccagagtatattccgagtt
tatcgctttggacagactaaacctgtgtatgtatataggttcttagctcagggaaccatg
gaagataagatttatgatcggcaagtaactaagcagtcactgtcttttcgagttgttgat
cagcagcaggttgagcgtcattttaccatgaatgagcttactgaactttatacttttgag
ccagacttattagatgaccctaattcagaaaaaaagaagaagagggatactcccatgctg
ccaaaggacaccatacttgcagaacttcttcagatacataaagaacacattgtaggatat
catgaacatgattctcttttggaccacaaagaagaagaagagttgactgaagaagaaaga
aaagcagcttgggctgagtatgaagcagagaagaagggactgaccatgcgtttcaacata
ccaactgggaccaatttaccccctgtcagtttcaactctcaaactccttatattcctttc
aatttgggagccctgtcagcaatgagtaatcaacagctggaggacctcattaatcaagga
agagaaaaagttgtggaagcaacaaacagtgtgacagcagtgaggattcagcctcttgaa
gatataatttcagctgtatggaaggaaaacatgaatctctcagaggcccaagtacaggcg
ttagcattaagtagacaagccagccaggagcttgatgttaaacgaagagaagcaatctac
aatgatgtattgacaaaacaacagatgttaatcagctgcgttcagcgaatacttatgaac
cgaaggctccagcagcagtacaatcagcagcaacaacaacaaatgacttatcaacaagca
acactgggtcacctcatgatgccaaagcctccaaatttaatcatgaatccttctaactac
cagcaaattgatatgagaggaatgtatcagtcagtagctggtggtatgcagccaccaccc
ttacagcgtgcaccacccccaatgagaagcaaaaatccaggaccttcccaagggaaatca
atgtga
DBGET
integrated database retrieval system
