Ursus americanus (American black bear): 123795128
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Entry
123795128 CDS
T07931
Symbol
PRPF38B
Name
(RefSeq) pre-mRNA-splicing factor 38B isoform X1
KO
K12850
pre-mRNA-splicing factor 38B
Organism
uar
Ursus americanus (American black bear)
Pathway
uar03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
uar00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
123795128 (PRPF38B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
uar03041
]
123795128 (PRPF38B)
Spliceosome [BR:
uar03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
123795128 (PRPF38B)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PRP38
PRP38_assoc
Motif
Other DBs
NCBI-GeneID:
123795128
NCBI-ProteinID:
XP_045657576
LinkDB
All DBs
Position
Unknown
AA seq
617 aa
AA seq
DB search
MANNSPALTGNSQPQHQAAAAAAQQQQQCGGGGGGATKPAVSGKQGNVLPLWGNEKTMNL
NPMILTNILSSPYFKVQLYELKTYHEVVDEIYFKFTALKLFLLTWIYSAPTCWCFSRSPW
ARACIDFNVGLVLLVFSIRSRQGNGLTQSCSEARSSPGSQVEVTHVEPWEKGSRKTAGQT
GMCGGVRGVGTGGIVSTAFCLLYKLFTLKLTRKQVMGLITHTDSPYIRALGFMYIRYTQP
PTDLWDWFESFLDDEEDLDVKAGGGCVMTIGEMLRSFLTKLEWFSTLFPRIPVPVQKNID
QQIKTRPRKIKKDGKEGAEEIDRHVERRRSRSPRRSLSPRRSPRRSRSRSHHREGHGSSS
FDRELEREKERQRLEREAKEREKERRRSRSIDRGLERRRSSRSRERHRSRSRSRDRKGDR
RDRDREREKENERGRRRDRDYDKERGNDREKERERSRERSKERRSRGEVEEKKHKEDKDD
RRHRDDKKDSKKEKKHSRSRSRERKHRSRSRSRNAGKRSRSRSKEKASKHKNESKEKSNK
RSRSGSQGRTDSVEKSRKREHSPSKEKSRKRSRSKERSHKRDHSDSKDQSDKHDRRRSQS
IEPESQEKQHKNKDETV
NT seq
1854 nt
NT seq
+upstream
nt +downstream
nt
atggctaacaacagccccgcgctgacaggcaactcgcagccgcagcaccaggcggccgcg
gccgcagctcagcagcagcagcagtgcggcggtggcggcggcggcgccactaagccggcg
gtctcgggcaagcagggaaatgtgctgccgctgtggggcaatgagaagactatgaacctc
aaccccatgatcttgaccaatatcctgtcgtcgccttacttcaaagtgcagctctacgag
ctcaagacctaccacgaggtggtggacgagatctactttaagtttacagctttaaaatta
ttccttttgacgtggatctactcggcgccaacttgttggtgcttctcccgctcaccctgg
gccagggcgtgtattgacttcaatgttggcctcgtgttgttggtattctctatccgatcc
agacagggaaatggattgactcagtcttgcagcgaggctcggagcagcccagggtcgcag
gtagaggtcacgcatgttgaaccgtgggagaaaggaagcaggaaaacagcaggccaaacg
gggatgtgcggaggggttcgaggtgttggaacaggaggaattgtttctacagctttctgc
ttgttatacaaattatttactctgaagctaactcgtaagcaagtgatgggtctcataaca
cacacagactctccatatattagagcccttggatttatgtatataaggtacacacagccc
cctacagatctgtgggactggtttgaatccttccttgatgatgaagaggacctagatgtg
aaggctggtggaggctgcgtaatgaccattggagaaatgctacggtcttttctcacaaaa
ctggagtggttttctactctgtttccaagaattccggttccagttcagaagaatattgat
caacagattaaaacccggcctagaaaaatcaagaaagatgggaaggaaggtgctgaggaa
atagatagacacgttgaacgcaggcgttcaaggtctccaaggagatcactgagtccacgg
aggtccccaagaagatcaagaagtagaagccatcatcgggagggccatgggtcttctagt
tttgatcgagaattagaaagagagaaagaacgccagcgactagagcgcgaagccaaagaa
agggagaaagaaaggcgaagatcccgaagtattgatcggggtttggaacgcaggcggagt
agcaggagtagggaaaggcatagaagtcgtagtcgaagtcgggataggaaaggggatcga
agggacagggatcgggaaagagagaaagaaaatgagagaggtagaagacgagatcgtgac
tatgataaggaaagagggaatgaccgagaaaaggagcgagagcgatcaagagaacggtcc
aaggaacggagaagtaggggtgaggtggaagagaagaagcacaaagaagataaagatgat
aggcggcatagagatgacaaaaaagattccaagaaggagaaaaaacacagtaggagtaga
agcagagaaaggaaacacagaagtaggagtagaagtagaaatgcagggaaacgaagcaga
agcaggagtaaagagaaagcaagtaaacataaaaatgaaagtaaagaaaaatcaaataaa
cgaagtagaagtggcagtcaaggaagaactgacagtgttgaaaaatcaagaaaacgggaa
catagccccagcaaagaaaaatctagaaagcgtagtagaagcaaagaacgctcccacaaa
cgagatcacagtgatagtaaggaccagtctgacaaacatgatcgtcgaaggagccaaagt
atagaaccagagagccaagaaaaacaacataaaaacaaagatgagactgtgtga
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