Ursus americanus (American black bear): 123795223
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Entry
123795223 CDS
T07931
Symbol
HFM1
Name
(RefSeq) probable ATP-dependent DNA helicase HFM1
KO
K15271
ATP-dependent DNA helicase HFM1/MER3 [EC:
5.6.2.4
]
Organism
uar
Ursus americanus (American black bear)
Brite
KEGG Orthology (KO) [BR:
uar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
uar03036
]
123795223 (HFM1)
Enzymes [BR:
uar01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
123795223 (HFM1)
Chromosome and associated proteins [BR:
uar03036
]
Eukaryotic type
Meiosis-specific proteins
Others
123795223 (HFM1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sec63
DEAD
SNRNP200_wHTH
Helicase_C
ResIII
DEXQc_Suv3
AAA_22
Hfq
Motif
Other DBs
NCBI-GeneID:
123795223
NCBI-ProteinID:
XP_045657759
LinkDB
All DBs
Position
Unknown
AA seq
1484 aa
AA seq
DB search
MLKSNDSLFSLDTLFFEKRDEAENYPDNEKSLDWFLPPAPLISEIPDTQALEEEIRSHKL
LGQEERPKILPSDLKITNENTNYISPTQKFQFAFSSNEYEAGDLNLGVAGNNDLSHVPGK
LTYGSSQKYKNQIGTEIAPEKSVPDNTKLVNFAEDKGESTPAFRKRLFKISDNIHEDVNS
NDSTNLDYPIGSMKIAPTEMNKGEPWKCSSSKQKHQYSDINLFTASSTFSASEIREDIFK
APTFSLASQPHEVQGVIENDLDSLKAVTEIPAIFRSIFKEFPYFNYVQSKAFDDLLYTDR
NFVICAPTGSGKTVVFELAITRLLMEVPLPWSNIKIVYMAPIKALCSQRFDDWKEKFGPI
GLNCKELTGDTVMDDLFEIQHAHIIMTTPEKWDSMTRKWRDNSLVQLVRLFLIDEVHVVK
DENRGPTLEVVVSRMKTVQSLSPTSENSSTIIPLRFVAVSATIPNAEDIAEWLSDGERPA
VCLKMDERHRPVKLRKVVLGFPCRSNQTEFKFDLTLNYKIASVIQTYSDQKPTLVFCATR
KGVQQAASVLVKDAKFIMAVEQKQRLQKCAYSIRDSKLRDILIHGVAYHHAGMELSDRKV
VEGAFTVGDLPVLFTTSTLAMGVNLPAHLVVIKSTMHYAGGMFEEYSETDILQMIGRAGR
PQFDTTATAVIMTRLSTKEKYIQMLACSDTVESSLHRHLIEHLNAEIVLHTITDVNIALE
WIRSTLLYIRALKNPSHYGFASGLNKDGIEAKLQELCLKNLNDLSSLDLIRMDEDINFKP
TEAGRLMAWYYITFETVKKFCTISGKETLLDLVTMIASCKEFVDVQLRINEKKTLNTLNK
DPNRVTIRFPMEGRIKTREMKVNCLIQAQLGCIPIQDFALTQDTAKIFRNGSRITRWLSD
FVAVQEKKFAVLLNSLILAKCFRCKLWENSLHISKQLEKIGITLSNAMVNAGLTSFKKIE
ETDARELELILNRHPPFGTQIKETVMYLPKYELEVEQIARYSDTMAEILVTIILRNFEQL
QTKRTAPDSHYVTLIIGDADNQLVFKHRIMDSVLLKAGNWTKKIDVKRAFKSEDLCINLI
SSEYVGLDIQQKFTVFYLGPKRLGNQIIMQKKSETEISHSKHSNRSTIAGPNIGMTACKK
PGNRECNHHCKNKHTCGHDCCKTGVAQKSEIKEPTISSYLSDLRSRNAVSSLPPVKRLKM
QMNKSQSVDLKEFGFTPKPSLPSISRSECLNIPELSIMEQRDQHEICAEVQQEPSEYQNK
DFSRWNYPTTSDEKAPQTVLFNRHLNASGNQNLTDVDKSNAPFSEVLNVNFELGDEVWDD
FDDENLLEVASFSASTEKTKTSGFGNTLSSSTGGSKLFLQESKSKFQGETAKSFVPSHEK
PDIYLSNSPVFKFDTSSMKKLPQQAGNASIVHLQERKQQSLSPEIEKLCFTHSKKIPNSS
HFVKKVDFFIRNSECKEDIDFSRYHPDDEADEMMSFLGIFDDIF
NT seq
4455 nt
NT seq
+upstream
nt +downstream
nt
atgctgaaatcaaatgattccttgttttctttggatactttgttttttgaaaaacgggat
gaagctgaaaactatccagacaatgaaaaatcactggattggtttctcccacctgctccg
ttgatttcagaaattccagatactcaggcattagaggaggaaataagaagtcataaactg
ttaggtcaggaagagaggccaaaaatattaccatcagatttaaagataactaatgaaaac
acaaattatatttcaccaacacaaaaattccagtttgccttttcctcaaatgaatatgaa
gcaggtgatcttaatttaggagtagcaggtaacaatgacttatcacatgttcctggcaag
ctgacatatggttcttctcagaaatacaaaaatcagattggcactgagatagcgcctgag
aaaagtgttccagataatacaaaattagttaattttgcagaagacaaaggagagagcaca
ccagccttccggaaaagattatttaaaatatctgacaatatacatgaggatgttaattct
aatgacagtacaaacttagactatcctattggctcaatgaaaattgccccaacagaaatg
aacaaaggggagccatggaaatgtagcagtagtaagcagaaacatcaatattcagacatt
aacctatttacagcaagcagtactttttctgcttctgaaatcagagaagacatattcaaa
gcaccaactttttcacttgcatcccagcctcatgaagttcaaggggtaatagaaaatgat
ttagattccttgaaggctgtcacagaaatcccggcaatatttagaagtattttcaaggaa
ttcccatatttcaactatgtacagtccaaagcctttgatgatcttctttacacagatagg
aattttgtgatttgtgctccaactggttctgggaaaactgtagtgtttgaactggctata
acaagattattaatggaagtcccattgccatggtcaaacattaaaattgtttacatggca
ccaataaaggccctgtgtagtcagcgttttgatgattggaaagaaaaatttggaccaata
ggactgaattgtaaagaactcactggagatacagtaatggatgacctatttgagattcag
catgcccatattattatgacaactccagaaaaatgggatagcatgactagaaaatggaga
gacaactctttggtccagctggttagactctttctcattgatgaggtacatgttgtaaaa
gatgaaaatcgtggaccaactcttgaagttgtagtcagcagaatgaaaactgtacagtct
ttatctcctacttctgaaaatagcagcacaattattccattgagatttgtagctgtatct
gcaacaattccaaatgctgaggatattgcagaatggctttcagatggtgaaagacctgcg
gtatgtctgaaaatggatgaaagacataggccagtgaaacttcggaaagtggttcttgga
tttccctgcagaagtaaccaaaccgaatttaagtttgatttaaccctcaactacaaaatt
gccagtgttatacaaacgtactctgatcagaaacccacacttgtgttttgtgcaacaagg
aaaggtgtgcaacaggctgcttctgttcttgtgaaagatgctaaatttattatggctgtg
gaacagaaacagaggttacagaagtgtgcatattccataagagattcaaaactgagagat
atcttaatacatggtgttgcttatcatcatgctggtatggagctgtcagatagaaaagta
gttgaaggagctttcactgttggagatctaccagttctttttactaccagtactttagct
atgggagtaaatttgcctgctcacctagtagttataaaatctacaatgcattatgctgga
ggaatgtttgaggagtacagtgaaacagatattctacagatgattggtagagctggtcga
cctcaatttgacactacagctactgcagttattatgactcgattaagtacaaaagagaag
tatattcagatgttagcttgtagtgacactgtagaaagcagtttacacagacatcttatt
gaacatttaaatgcagagatagtgttacataccatcacagatgtgaatattgctttggaa
tggatacgatcaactttgctttatatcagagctttgaaaaatccatctcattatggtttt
gcatctggattgaacaaagatggaattgaagcaaaattacaagagttatgtttgaagaat
ctgaatgatttatcatctctggacttgataaggatggatgaagatattaatttcaaacca
actgaggcaggaagattgatggcttggtattacatcacatttgagacagtgaagaaattt
tgtaccatcagtggaaaagagactttattagatctggtcacaatgatagccagctgcaag
gaatttgtagatgtgcagttaaggataaatgaaaagaaaacactgaatactttgaacaaa
gatccaaatcgggtaactatcagatttccaatggaaggaagaattaaaacaagagaaatg
aaagtaaattgtcttattcaggctcagctaggatgcattcccatacaagactttgctttg
acacaagataccgcgaagattttcagaaacggttcacgaattacaagatggttgtcagat
tttgtggctgttcaagaaaagaagtttgctgtactattgaacagcttgattttagctaaa
tgttttagatgcaaactttgggaaaactctctacatatatccaaacagctggaaaaaatt
ggtataacattgtcaaatgcaatggtaaatgcaggtttgacctcctttaaaaaaatagaa
gaaacagacgcaagggaacttgaactgattttaaatagacaccccccttttggaacgcaa
ataaaagaaacagtgatgtatctaccaaaatatgaacttgaagtggaacagattgcaaga
tatagtgataccatggcggaaatattagtgaccattatattaagaaactttgaacagcta
caaactaaaagaacagcaccagattctcactatgttaccttaatcataggtgatgcagat
aatcagctggtttttaagcacagaattatggattctgttttgctaaaagctggaaattgg
actaaaaagattgatgtgaagagagcttttaaatctgaagatctttgcataaatctaatt
agttctgaatatgttggacttgatattcagcagaaatttacagtcttttacttaggaccc
aagaggcttggaaatcaaataattatgcaaaaaaaatcagaaactgagatttcccattct
aaacattcaaacagatctacgatagcaggacccaatataggaatgactgcttgcaaaaaa
cctgggaaccgagaatgtaatcatcactgtaaaaataaacatacatgtggacatgactgc
tgtaaaactggagttgcacaaaagtcagaaattaaagagccaacaatctcttcatatcta
tccgatttaagaagcaggaatgctgtttcatcacttcctccagttaaacgtctcaagatg
caaatgaataaatctcaaagtgtggaccttaaagaatttggttttactccaaagccttct
cttcccagtatatcaagatcagagtgcttaaacatacctgaattgtctataatggagcag
agggatcagcatgaaatctgtgcagaagttcaacaagaaccatcagaatatcaaaacaaa
gatttctctagatggaactatcctacaacttcagatgagaaagcccctcaaacagtgctg
ttcaacagacatcttaatgcatctggaaaccagaatttgacagatgtggataaaagtaat
gctccattctcagaagttttgaatgtgaactttgaattgggagatgaagtttgggatgat
tttgatgatgagaacttattagaagttgccagtttttcagccagtactgagaagacaaaa
acttcaggatttggaaacactttgagttcaagtacggggggaagtaagctattcctccaa
gagtcaaagagcaaattccaaggagaaacggcaaaaagttttgttccatcacatgagaag
ccagatatttatttatcaaattctcctgtgttcaagtttgatacatcatccatgaagaaa
ttacctcaacaagctggaaatgcaagtattgtccatttacaagaaagaaaacaacaaagt
ctgtcaccagaaattgaaaaactgtgctttactcactctaaaaaaataccaaattcttca
cattttgttaagaaagtggatttctttattagaaacagtgaatgtaaagaggacattgat
ttcagtaggtatcatcctgatgatgaagctgatgaaatgatgtcttttctgggaatattt
gatgatattttctaa
DBGET
integrated database retrieval system
