Ursus americanus (American black bear): 123795921
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Entry
123795921 CDS
T07931
Symbol
TAF5
Name
(RefSeq) transcription initiation factor TFIID subunit 5
KO
K03130
transcription initiation factor TFIID subunit 5
Organism
uar
Ursus americanus (American black bear)
Pathway
uar03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
uar00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
123795921 (TAF5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
uar03021
]
123795921 (TAF5)
03036 Chromosome and associated proteins [BR:
uar03036
]
123795921 (TAF5)
Transcription machinery [BR:
uar03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
123795921 (TAF5)
Coactivators
SAGA/TFTC/STAGA complex
123795921 (TAF5)
Chromosome and associated proteins [BR:
uar03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
123795921 (TAF5)
STAGA complex
123795921 (TAF5)
TFTC complex
123795921 (TAF5)
SAGA complex
123795921 (TAF5)
SLIK complex
123795921 (TAF5)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
WD40_Prp19
TFIID_NTD2
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_2nd
EIF3I
Beta-prop_EML_2
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML
WDR55
NBCH_WD40
WD40_MABP1-WDR62_1st
Beta-prop_WDR75_1st
ANAPC4_WD40
Beta-prop_TEP1_C
Beta-prop_IFT122_1st
Beta-prop_SCAP
WDR90_beta-prop_4th
Beta-prop_RIG_2nd
Beta-prop_IFT140_1st
Beta-prop_Vps41
Beta-prop_EIPR1
Beta-prop_DCAF4
WD40_RFWD3
Beta-prop_HPS5
Beta-prop_WDR19_1st
Beta-prop_SPT8
WD_LRWD1
Beta-prop_DCAF12
Beta-prop_Nup120_160
PEP5_VPS11_N
RAB3GAP2_N
CDK5RAP3
Beta-prop_RIG_1st
eIF2A
Cytochrom_D1
VPS8_N
ABM-like
PROPPIN
Motif
Other DBs
NCBI-GeneID:
123795921
NCBI-ProteinID:
XP_045658984
LinkDB
All DBs
Position
Unknown
AA seq
801 aa
AA seq
DB search
MAALAEEQTEVAVKLEPEVPPTLLPPQAGDGAGEGGGGTTNNGPNGGGGNVAAAASSAGG
DGGTPKPSVAVSAVAPAGAAPVPAAAAEAGAPHDRQTLLAVLQFLRQSNLREAEEALRRE
ARLLEEAVAGTGAPGEADGAGTEAASALLSRVTASAPGPAAPDPPGTGASGAAAVSGLAT
GPAAPGKVGSVAVEDQPDVSAVLSAYNQQGDPTMYEEYYSGLKHFIECSLDCHRAELSQL
FYPLFVHMYLELVYNQHENEAKSFFEKFHGDQECYYQDDLRVLSSLTKKEHMKGNETMLD
FRTSKFVLRISRDSYQLLKRHLQEKQNNQIWNIVQEHLYIDIFDGMPRSKQQIDAMVGSL
AGEAKREANKSKVFFGLLKEPEIEVPLDDEDEEGENEEGKPKKKKPKKDSIGSKSKKQDP
NAPPQNRIPLPELKDSDKLDKIMNMKETTKRVRLGPDCLPSICFYTFLNAYQGLTAVDVT
DDSSLIAGGFADSTVRVWSVTPKKLRSVKQAADLSLIDKESDDVLERIMDEKTASELKIL
YGHSGPVYGASFSPDRNYLLSSSEDGTVRLWSLQTFTCLVGYKGHNYPVWDTQFSPYGYY
FVSGGHDRVARLWATDHYQPLRIFAGHLADVNCTRFHPNSNYVATGSADRTVRLWDVLNG
NCVRIFTGHKGPIHSLTFSPNGRFLATGATDGRVLLWDIGHGLMVGELKGHTDTVCSLRF
SRDGEILASGSMDNTVRLWDAVKAFEDLETDDFTTATGHINLPENSQELLLGTYMTKSTP
VVHLHFTRRNLVLAAGAYSPQ
NT seq
2406 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgctggcggaggagcagacggaggtggcggtcaagttagagccggaggtaccg
ccgacgctgctacctccgcaggcgggggacggcgctggcgagggtggcggcggcactacc
aacaacggccccaacggcggcggcgggaacgttgcggcggcggcgtcgtcggccggcggg
gatggtgggacccccaaaccctcggtggctgtctccgccgttgctccggcgggggcggcc
ccggtgcccgccgctgctgcggaggccggcgctccccacgaccgacagactctgctggcc
gtgctgcagttcctgcggcagagcaacctccgcgaggccgaagaggcgctgcgccgtgag
gcccggctgttggaggaggcagtggcgggcaccggagccccgggagaggcggacggcgcc
ggtacagaggcggctagcgcgcttctcagccgggtcacagcctcggcccccggccccgcg
gcccctgaccctccgggcaccggcgcttcgggggccgccgccgtctcgggcttagcgaca
ggtcctgcggctccggggaaagttggaagtgtagctgtagaagaccagccggatgtcagt
gctgtgctgtcagcctacaaccaacaaggagaccccacaatgtatgaagaatactatagt
ggactgaaacacttcattgaatgttccttggactgccatcgggcagagttatcccaactc
ttttatcctctgtttgtacacatgtacttggaactagtctacaatcaacatgagaatgaa
gcaaaatcattttttgagaagttccatggagatcaggaatgttattaccaggatgaccta
cgagtattatctagtcttaccaaaaaggaacacatgaaagggaatgagaccatgttggat
tttcgaacaagtaaatttgttctgcgtatttcccgtgactcgtaccaactcttgaagagg
catcttcaggagaaacagaacaatcagatatggaacatagttcaggagcacctctacatt
gacatctttgatgggatgccgcgtagtaagcaacagatagatgcgatggtgggaagtttg
gcaggagaggctaaacgagaggcaaacaaatcaaaggtattttttggtttattaaaagag
ccagaaattgaggtgcctttggatgatgaagatgaagaaggagaaaatgaagaaggaaaa
cctaaaaagaagaagcctaaaaaagatagcattggctccaaaagcaaaaagcaagatccc
aatgctccacctcaaaacagaatccctcttccagagttgaaagattcagataagttggat
aagataatgaatatgaaagaaaccaccaaacgagtacgccttgggccagactgtttaccc
tccatttgtttctatacattcctcaatgcttaccagggccttactgcagtggatgtcact
gatgattctagtttgattgctggaggttttgcagattcaactgttagagtgtggtctgtg
acacccaagaagcttcgtagtgttaaacaagcagcagatcttagcctcatagacaaagaa
tcagatgatgtcttagaaagaataatggatgagaaaacagcaagcgagttgaagattttg
tatggtcacagcgggcctgtctatggagctagcttcagtccggataggaactacttgctt
tcctcttcagaagatggaactgttagattgtggagtcttcaaacttttacttgcttggtg
ggatataaaggacacaactacccagtatgggacacacagttttctccatatggatattat
tttgtgtcagggggccatgatcgagtagctcggctatgggctacagaccactatcagcct
ttaagaatatttgccgggcatcttgctgatgtgaattgtaccagattccatccaaattct
aattatgttgctacgggctctgcagacagaactgtgcggctctgggatgtcctgaatggg
aactgtgtaagaatattcactggacacaagggaccaattcattccttgacattttctccc
aatgggagattcctggctacaggagcaacggatggcagagtactcctttgggatattgga
catggtttgatggttggagaattaaaaggccacactgatacagtctgttcacttaggttc
agtagagatggtgaaattttggcatcaggttcaatggataatacagtccggttgtgggat
gctgtcaaagcatttgaggatttagagaccgatgactttactacagccactgggcatata
aatttacctgagaattcacaggagttattgttgggaacatatatgaccaaatcaacgcca
gttgtgcacctccattttactcgaagaaacttggttctagctgcaggagcttatagtccg
caataa
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integrated database retrieval system
