Ursus americanus (American black bear): 123795926 Help Entry 123795926         CDS       T07931                                  Symbol PDCD11 Name (RefSeq) protein RRP5 homolog isoform X1   KO K14792   rRNA biogenesis protein RRP5 Organism uar  Ursus americanus (American black bear) Brite KEGG Orthology (KO) [BR:uar00001]  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03009 Ribosome biogenesis [BR:uar03009]     123795926 (PDCD11) Ribosome biogenesis [BR:uar03009]  Eukaryotic type   90S particles    Other 90S particles     123795926 (PDCD11) BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  S1_RRP5 S1 HAT_PRP39_N HAT_Syf1_CNRKL1_N HAT_PRP39_C Spt6_S1 OB_RRP5 OB_RRP5_4th Suf TPR_14 HAT_Syf1_CNRKL1_C TPR_19 ARM_TT21 UTP6_C TPR_CcmH_CycH TPR_15 ARM_TT21_5th DUF7017 DUF2110 DUF2642 NRDE-2 Motif Other DBs NCBI-GeneID:  123795926 NCBI-ProteinID:  XP_045658989 LinkDB All DBs Position Unknown AA seq 1874 aa AA seqDB search MEESFPRGGTRKTHKSKKALQQSVEQDNLFDISTEEESTKRKKSQKGPAKTKKLKIEKRD SSKSTREKFEILSIESLCEGMRILGCVKEVNELELVISLPNGLRGFVQVTEICDAYTKKL NEQVAQEEPLKDLVGLPELFSPGMLVRCVVSSVGITERGKKSVKLSLNPKNVNEVLSAEA LKPGMLLTGTVSSLEDHGYLVDIGVSGARAFLPLQKAQEYIRQKNKGAKLKVGQYLNCVI EEVKGNGGVVGLSIVHSEVSTAIATEEQNWTLNNLLPGLVVKAQVQKVTPVGLTLNFLSF FTGLVDFMHLDPKKAGTYFSNQAVRACVLCVHPRTRAVRLSLRPVFLQPGRSLTRLSCQH LGAVLDEVPVQNFFSKAGATFRLKDGALAYARLSHLSDSKTVFNAEAFKPGNTHKCRVID YSQMDELALLSLRTSIIEAQYLRYHDIKPGALVEGTVLTVKSYGMLVKVGEQIRGLIPPM HLADILMKNPEKKYRIGDEVKCRVLLCDPEAKKLMMTLKKTLIESKLPAITCYADARPGL QTHGFILRVKDCGCIVKFYNDVQGLVPKHELSAEYVPDPERVFYAGQVVKVVVLNCEPSK ERMLLSFKLLGDPKKEHPGQNQKKRRTVSLGQLVDVKVLEKTKDGLEVAVLPHNIPAFLP TPHLSDHVANGPLLYHWLQAGDTLHRVLCLSQSEGRVLLCRKPALVSTVEGGQDPKSFAE IHPGMLLIGFVKSIKDYGVFVQFPSGLSGLAPKAIMSDKFVTSTSDHFVEGQTVVAKVTN VDEEKQRMLLSLRLSDCGLGDLATTSLLLLSQCLEERQGVRSLMSNRDSVLIQTLAEMTP GMVLDLEVQDVLEDGSVAFSEGPVPGLVLRASRYHRAGQEVEPGQKKKVVILNVDMLKLE VHVSLCHDLVNRKAKKLRKGSEYQAIVQHLEESFAVASLVETGHLAAFSLTSHLNDTFRF DSEKLQVGQGVSLTLKTTEPGVTGFLLAVEGPAAKRTVRQTRKDSETVDEDEEADPALVV GAVKKHTLSIGDMVRGTVKSIKPTHVVVTLEDGIIGCIHASHILDDVPVGTSPTAKLKVG KTVTARVIGGRDMKTFKFLPISHPRFIRTIPELSIRPSELEKDGCTALNTHSVRPLEKIK QYQAGQTLICFLKKYNVVKKWLEVEIAPDIRGRIPLLLTSLSFKVLKHPDKKFRIGQALK ATVVGPDSSKAFLCLSLIGPHKLEKGEVAMGRVVKVTPKEGLTVSFPFGKIGRVSIFHVS DSYSETPLEDFVPQKVVRCYVLSATGHVLTLSLRSSRTNPETKSKITDPEINSIQDVQEG QLLRGYVKCVQPHGVRFGLGPSVVGLARYPHVSQYSPSKKALFNRYLPEGKLLTAKVLRL NRQKNLVELSFLPSDTGKPDVFPASLGLPLLKQEEREMEAEEKEHKEEEQKEEKEKKNQK RKGKRKQQGQEEVQLPGKEKTEPQKPQAEKQGKRRRPESASEQDRVNKKQKEAAPSEEDD SGVEVYYREGEEEGEEMSVLPKEKPTRPAEVPRLQLSSGFVWDVGLDSLTPALPPRGESS DSEDEDKPQQSTQKKSKKERMLEKQKAEKELSRIEEALMDPGRQPESADDFDRLLLSSPN SSILWLQYMAFHLQATEIEKARAVAERALKTISFREEQEKLNVWVALLNLENMYGSQESL TKVFERAVQYNEPLKVFLHLADIYTKSEKFQEAGELYNRMLKRFRQEKAVWIKYGAFLLR RGQAGASHRVMQRALECLPNKEHVDVIAKFAQLEFQLGDAERAKAIFENTLSTYPKRTDV WSVYIDMTIKHGSQKEVRDIFERVIHLSLAPKRMKFFFKRYLDYEKQHGTEKDVQAVKAK ALEYVEAKSSLLED NT seq 5625 nt NT seq  +upstreamnt  +downstreamnt atggaagaaagcttcccccgagggggtacgagaaagacccacaaatcaaagaaagctttg cagcagtcagttgaacaagacaacttatttgatatttctactgaagaggaatccaccaaa aggaaaaagagccagaaagggccagcaaaaacaaaaaagttgaaaatcgagaagagagac agcagcaagtctacaagagagaagtttgaaatccttagtattgagtccctgtgtgagggg atgcggattttgggttgtgtgaaggaggtcaatgaactggaactggtgattagtctcccc aatggactccggggcttcgtgcaagtgactgaaatctgtgatgcgtataccaaaaagctg aatgagcaggtggctcaagaagagcctctgaaggacctggtcggcttgcctgaactcttc tcacctgggatgctggtgagatgtgtggtgagcagtgtgggcatcacagagaggggcaaa aagagtgtcaagttatctctgaaccccaaaaatgtcaatgaagtgctaagtgctgaggcc ctgaagcctggcatgctgctcacaggcactgtgtccagcctggaagaccatggctaccta gtggacattggagttagtggggctagagcctttctgccactgcagaaagcccaggagtat atccgacagaagaacaaaggtgctaaactaaaggtgggtcagtacctgaactgcgtcatt gaagaggtgaaaggcaatggaggagttgttggtctgtctattgttcattctgaagtttct actgccattgctactgaggagcaaaactggacccttaataacttgctgccaggactggtg gtcaaagcccaggtacagaaggtgactccagttggccttacactaaacttcctctccttc ttcactggcctggttgactttatgcacctggatcccaagaaagctggaacatatttttca aatcaagcagtaagggcctgtgttctctgtgtccatcctcggacccgggctgtacggctg agcctgcgtcccgtcttcctgcagcccgggcgctcactcacccggctgtcttgccagcac ctgggagctgtgctggatgaggttcctgtccagaacttcttcagcaaggccggggccacc ttcaggctgaaggatggggcgctggcctatgcccggctcagccatctctccgactctaag actgtcttcaatgctgaggccttcaagccagggaacactcacaagtgtagagtcatcgat tacagccaaatggatgaactggccttgctctctctgaggacgtctattattgaagctcag taccttagataccatgacatcaagcctggggcattggtagagggcacagtgctgaccgta aagtcatatgggatgctggtgaaggtgggtgagcaaatcaggggcctgatacctcccatg cacctggctgacatcctgatgaagaatccagagaagaagtaccgcattggggatgaggtc aagtgccgggttttgctttgtgatcctgaagccaagaagctaatgatgaccctgaagaaa actctaattgagtctaaactgcctgccattacctgctatgccgatgccaggcctggtctg cagacacacggcttcatcctcagggtcaaggactgcggctgcattgtgaagttctacaac gatgtgcagggactggtgcccaagcatgagctcagtgccgagtatgtccctgacccagag agggtcttttacgctggccaggtggtgaaggttgtggtgctgaactgcgagccatccaaa gagaggatgcttttgtccttcaagctgttgggtgatccaaagaaagagcatccaggccag aatcagaagaaaagaagaactgttagtctcggacagttggtggatgtgaaggttttagag aagaccaaagatgggctggaggtggccgtcctgccccacaacatccctgctttcctcccc actcctcatctgtcggaccatgtcgccaatggccctctattgtatcactggctccaggct ggtgacacccttcacagggtactttgtctgagccagagtgagggacgtgtgctcctttgt aggaagccagctttggtctccactgtggagggtggccaggatcctaagagcttcgcagaa atccatcctggaatgctgctcatcggttttgtgaagagcatcaaggactacggggtgttc gttcagttcccgtccggtcttagcggactggcccccaaagctatcatgagcgacaagttt gtgacttccacaagtgaccactttgtcgaggggcagacggtggttgcaaaggtgaccaac gtggatgaggagaagcagcgcatgctgctgtcgctgcggctgtcggactgtggtctggga gacctggctaccaccagcctcctcctcctgagccagtgcctggaagagcggcagggtgtg cgcagcctcatgagcaaccgagactctgtgttgatccagacgttggctgagatgaccccc gggatggtccttgacctagaagtgcaggacgtgttggaggatggctctgtggcgttcagt gagggccccgtgcccggcctggtcctgagggccagcagatatcatcgggcagggcaagag gtggaacctgggcagaaaaagaaggttgtcatcttaaatgttgatatgttgaagttggag gttcatgtttccctttgccacgatttggtgaatagaaaagctaaaaagctgaggaaaggc agcgagtaccaggcgattgtgcagcacttggaggagtcctttgctgtcgcctccttggtg gagactggccacctggcagctttctccctgacctctcacctcaatgacaccttccgcttt gactcagagaagttgcaggtgggacagggtgtctccctaaccctcaagaccacagaacca ggagtgactggttttcttttggctgttgagggaccagccgctaagaggactgtgagacag acccggaaggactctgagacagtcgatgaggacgaggaagcagacccagctctggttgtg ggggccgtaaagaagcacaccctgtccattggggacatggtcagaggcactgtcaagtcc attaagcccacccatgtggttgtgaccctggaagacggcatcatcggctgtattcacgcc tcccacattctagatgatgttccagtgggcacatctcctactgccaagctgaaagttggg aagacagtcactgcccgagtgattggtggacgagacatgaagacgttcaagtttctccca ataagtcatcccagatttattcgaaccattccagagctgagtatccggccaagtgagctg gagaaggatggctgcactgctctcaacactcactctgttaggcccttggagaagattaaa cagtaccaggctgggcagactttgatttgcttcttgaagaagtacaacgtggtcaagaaa tggcttgaggtggagattgctccagacatccggggcaggattcctttgttgctcacgtct ctcagcttcaaggttctgaaacatccagataagaagttccggattggtcaggccctgaag gctactgtggttggcccagattcttccaaggccttcttgtgtctctcacttataggtcct cacaagcttgagaagggggaagtggccatgggccgagtggtgaaggtgacccctaaggag gggctgactgtctccttcccctttgggaagatcggaagagtcagtatatttcacgtgagt gactcctactcagagacgcccctggaagacttcgtcccccagaaggttgtcaggtgttac gtcctgtctgctacaggccacgtattgactctgtctctgcgatcgtccaggacaaacccg gagacgaagagcaaaataaccgatcctgagattaactccatccaggacgttcaggaaggg cagctcctgcggggctatgtgaagtgtgtccagccgcatggtgtgcgctttggccttggc ccctctgttgtgggtttggcccgatatccgcatgtctcccagtacagtccatccaagaaa gccctttttaacagatacctcccggaagggaagctgctcacagccaaggtcctgaggctg aaccgccagaagaacctggtagagctgtcgttcctccccagtgacactgggaagccggac gtgtttcctgcctccctaggactgccacttctaaagcaagaggagagggaaatggaggca gaagagaaagagcacaaagaggaagagcagaaagaagagaaggagaagaagaatcagaaa aggaaagggaagaggaagcagcaggggcaggaggaggtgcagctgcccggcaaggagaaa actgagccccagaaaccacaagcagagaagcagggcaagcggcggcgcccggagtctgcg agcgaacaggacagagtgaacaagaagcagaaggaggctgctccgtcagaggaggacgac agtggtgttgaagtgtattatcgggaaggagaagaggagggagaagagatgagtgtgctg cccaaggagaagccgaccaggccagcagaagtgcctcggctacagctgtcctccggtttc gtctgggacgtggggctagactctctgaccccggccttaccacctcgaggagagagctca gacagcgaggacgaggacaagccacagcagtccacgcagaagaaaagcaagaaggaaagg atgttggagaagcagaaggcagagaaagagctgtcccgcattgaggaggcgctgatggat cctgggcgacagccagagtcggcagatgattttgaccgactcctgctgagctcccccaac agctccatcctgtggctgcagtacatggccttccacctacaggccacggaaatcgagaag gcccgggctgtggccgagagggctctcaagaccatttccttcagagaggagcaagagaag ctgaacgtgtgggtggccctgctgaatctggagaacatgtacggctctcaggagtccctg accaaggtctttgagcgggccgtgcagtacaatgagcctctcaaggtctttctccatctg gctgacatctacaccaagtcagagaaattccaggaagctggtgaactctacaaccggatg ctgaagagattcaggcaggagaaagctgtctggatcaaatatggcgcctttcttctgcgg aggggccaggctggggccagtcaccgtgtgatgcagcgagctctcgagtgtctgcccaat aaagagcatgtggatgtgattgccaagtttgcccagctggagttccagctgggggatgcg gaacgggccaaagccatttttgagaacacactgagcacctacccaaagcgcactgatgtc tggtcggtttacatcgacatgaccattaagcacggcagccagaaggaagtccgggacatc tttgaacgggtcattcatctcagcctggcccccaagcgaatgaagttcttcttcaagcgc tacctggactatgagaaacaacatggcactgagaaggacgtgcaggcagtaaaggcgaag gccctggaatacgtggaagctaagagctccctgttggaggactag

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