Ursus americanus (American black bear): 123795983
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Entry
123795983 CDS
T07931
Symbol
TRUB1
Name
(RefSeq) probable tRNA pseudouridine synthase 1
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
uar
Ursus americanus (American black bear)
Brite
KEGG Orthology (KO) [BR:
uar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
uar03016
]
123795983 (TRUB1)
Enzymes [BR:
uar01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
123795983 (TRUB1)
Transfer RNA biogenesis [BR:
uar03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
123795983 (TRUB1)
Prokaryotic type
123795983 (TRUB1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
Pus10_C
MoCoBD_2
Motif
Other DBs
NCBI-GeneID:
123795983
NCBI-ProteinID:
XP_045659171
LinkDB
All DBs
Position
Unknown
AA seq
350 aa
AA seq
DB search
MAAAEAAVVSSSPLETDTALVPETAGTAAATAATSSATAAIAAVAAAARTGSEARVSKAA
LATKLLSLSGVFAVHKPKGPTSAELLNRLKEKLLAEAGMPSPEWTKRKKQTLKIGHGGTL
DSAARGVLVVGIGRGTKMLTSMLSGSKRYIAIGELGKATDTLDSTGKVTEEKPYDKITQE
DIEGILQKFTGNIMQVPPLYSALKKDGQRLSTLMKRGEVVEAKPARPVTVYSLSLQKFQP
PFFTLDVECGGGFYIRSLVSDIGKELSSCANVLELTRTKQGPFTLEEHALPEDKWTIDDI
AQSLEHCSSLLPAELALKKSKPEESNEQVLSCEYITLSETKGEDDVIKTS
NT seq
1053 nt
NT seq
+upstream
nt +downstream
nt
atggcagctgctgaggcggcagtggtatcgtcgtcacctttggaaacagacacagccctg
gtccctgaaactgcaggaacagccgcagcaacggccgccacctcatcagcaacggctgca
atcgcggccgttgcggccgctgccagaaccggatccgaagccagggtctccaaggccgct
ttggctactaagctgctgtccctgagcggcgtgttcgccgtgcacaagcccaaagggccc
acttcagccgagctgctgaatcggctgaaggagaagctgctagcagaagctggaatgcct
tctccagaatggaccaaaaggaaaaagcagactctgaaaattggacatggagggacgcta
gacagtgcagcccgaggagttctggtggttggaattggaaggggaacaaaaatgttgacc
agtatgttgtcagggtccaagaggtatattgccattggagaactggggaaagccactgac
acgctagactctactgggaaagtaacagaagaaaaaccttacgataaaataacacaagaa
gatattgaaggcattctacagaaatttactgggaatataatgcaggtacctcccctctat
tctgcattaaagaaggatggacagagactttcaaccttgatgaagagaggcgaagtagta
gaagcaaagcctgccaggcccgttaccgtatatagtctctcccttcaaaaattccagcca
ccatttttcacattagatgttgaatgtggaggaggtttttatatcagaagcttggtcagt
gacattggcaaagaactctcttcctgtgccaatgtcctagagctgacccgaaccaaacag
ggaccatttacactagaagagcatgcccttcctgaagacaaatggactattgatgacatt
gcacagtctctggaacattgctcatctcttctcccagcagagttggcacttaaaaagtca
aaacctgaggagtctaatgaacaagttttgagctgtgaatatataactctgagtgagaca
aagggagaagatgatgtaattaagacatcttaa
DBGET
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