Ursus americanus (American black bear): 123796561
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Entry
123796561 CDS
T07931
Name
(RefSeq) ATP-dependent RNA helicase DDX3X isoform X1
KO
K11594
ATP-dependent RNA helicase DDX3X [EC:
5.6.2.7
]
Organism
uar
Ursus americanus (American black bear)
Pathway
uar04622
RIG-I-like receptor signaling pathway
uar05161
Hepatitis B
uar05203
Viral carcinogenesis
Brite
KEGG Orthology (KO) [BR:
uar00001
]
09160 Human Diseases
09161 Cancer: overview
05203 Viral carcinogenesis
123796561
09172 Infectious disease: viral
05161 Hepatitis B
123796561
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
uar03019
]
123796561
03041 Spliceosome [BR:
uar03041
]
123796561
03036 Chromosome and associated proteins [BR:
uar03036
]
123796561
Enzymes [BR:
uar01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
123796561
Messenger RNA biogenesis [BR:
uar03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
123796561
mRNA cycle factors
Common to processing body (P body) and stress granule
123796561
Spliceosome [BR:
uar03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
123796561
Chromosome and associated proteins [BR:
uar03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
123796561
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Utp25_C
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
123796561
NCBI-ProteinID:
XP_045660011
LinkDB
All DBs
Position
Unknown
AA seq
662 aa
AA seq
DB search
MSHVAVENALGLDQQFAGLDLNSSDNQSGGSTASKGRYIPPHLRNREATKGFYDKDSSGW
SSSKDKDAYSSFGSRSDSRGKSSFFSDRGSGSRGRFDDRGRSDYDGIGSRGDRSGFGKFE
RGGNSRWCDKSDEDDWSKPLPPSERLEQELFSGGNTGINFEKYDDIPVEATGNNCPPHIE
SFSDVEMGEIIMGNIELTRYTRPTPVQKHAIPIIKEKRDLMACAQTGSGKTAAFLLPILS
QIYSDGPGEALRAMKENGRYGRRKQYPISLVLAPTRELAVQIYEEARKFSYRSRVRPCVV
YGGADIGQQIRDLERGCHLLVATPGRLVDMMERGKIGLDFCKYLVLDEADRMLDMGFEPQ
IRRIVEQDTMPPKGVRHTMMFSATFPKEIQMLARDFLDEYIFLAVGRVGSTSENITQKVV
WVEESDKRSFLLDLLNATGKDSLTLVFVETKKGADSLEDFLYHEGYACTSIHGDRSQRDR
EEALHQFRSGKSPILVATAVAARGLDISNVKHVINFDLPSDIEEYVHRIGRTGRVGNLGL
ATSFFNERNINITKDLLDLLVEAKQEVPSWLENMAYEHHYKGSSRGRSKSSRFSGGFGAR
DYRQSSGASSSSFSSSRASSSRSGGGGHGSSRGFGGGGYGGFYNSDGYGGNYNSQGVDWW
GN
NT seq
1989 nt
NT seq
+upstream
nt +downstream
nt
atgagtcatgtggcggtggaaaatgcgctcgggctggaccagcagtttgctggactagac
ctgaactcttcagataatcagagtggaggaagtacggcaagcaaggggcgctatattcct
cctcacttaaggaacagagaagctactaaaggattctacgataaagacagttcagggtgg
agttctagtaaagataaggatgcatacagcagttttggatctcgtagtgattcaagaggg
aagtctagtttctttagtgatcgtggaagtggatcaaggggaaggtttgatgatcgtgga
cggagtgactacgatggcattggcagccgtggtgacagaagtggttttggcaaattcgaa
cgtggtggaaatagtcgctggtgtgacaaatcagatgaagatgattggtcaaaaccactc
ccaccaagtgaacgcttggaacaggaactcttctctggaggaaacactgggattaacttt
gagaaatatgatgacattccagttgaggcaacaggcaacaactgtcctccgcatattgaa
agtttcagtgacgttgagatgggagaaattattatgggcaatattgagcttactcgttac
actcgcccaactccagtgcaaaagcatgctattcctattatcaaagagaaaagagactta
atggcttgtgctcaaacagggtctggaaaaactgcagcgtttctcttacccatcttgagt
cagatttattcagatggtccaggcgaggctttgagggccatgaaggaaaatggaaggtat
gggcgtcgcaagcaatacccaatctccttggtattagcaccaactagagaattggcagta
cagatctatgaggaagccaggaaattttcataccgatctagagttcgaccttgcgtggtt
tatggtggtgctgatatcggtcaacagatacgagacttagagcgtggatgccacttgtta
gtagctactccaggacgtctagtggatatgatggagagaggaaagattggattagacttt
tgcaaatacttggtgttagatgaagccgatcggatgttggatatgggttttgaacctcag
atacgtagaatagttgaacaagatactatgccaccaaaaggtgtccgccacactatgatg
tttagtgctacttttcctaaggaaatacagatgctggctcgtgatttcttggatgagtat
atctttttagctgtaggaagagttggctctacctctgagaatattacacagaaagtagtt
tgggtggaagagtccgacaaacggtcgtttttgcttgaccttctaaatgcaacaggcaag
gattcactgaccttagtgtttgtggagaccaaaaagggtgcagattctctggaagatttc
ttgtaccatgaagggtatgcttgtaccagtatccatggagaccgatctcagagagataga
gaagaggcccttcaccagttccgctcaggaaaaagcccaattctagtggctacagcagta
gcagcaagaggactggatatttcaaatgtgaaacatgttatcaattttgacttgccaagt
gatatcgaagaatatgtacatcgcattggccgtacaggacgtgtagggaaccttggcctt
gccacctcattctttaatgagagaaatataaacattaccaaggatttgttggatcttctt
gttgaagctaaacaagaagtgccatcttggttagaaaacatggcttatgaacaccactac
aagggtagcagtcgtggacgatctaagagtagtagattcagtggaggatttggtgcccga
gactatcgacaaagcagcggtgccagcagttccagcttcagcagcagccgcgcaagcagc
agccgcagtggtggaggcggccacggcagcagcagggggtttggtggaggtggctatgga
ggcttttacaacagtgatggatatggaggaaattataactcccagggggttgactggtgg
ggtaactga
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