Ursus americanus (American black bear): 123797218
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Entry
123797218 CDS
T07931
Name
(RefSeq) LOW QUALITY PROTEIN: high mobility group protein B1-like
KO
K10802
high mobility group protein B1
Organism
uar
Ursus americanus (American black bear)
Pathway
uar03410
Base excision repair
uar04140
Autophagy - animal
uar04217
Necroptosis
uar04613
Neutrophil extracellular trap formation
Brite
KEGG Orthology (KO) [BR:
uar00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
123797218
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
123797218
09143 Cell growth and death
04217 Necroptosis
123797218
09150 Organismal Systems
09151 Immune system
04613 Neutrophil extracellular trap formation
123797218
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
uar03036
]
123797218
03400 DNA repair and recombination proteins [BR:
uar03400
]
123797218
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
uar04147
]
123797218
Chromosome and associated proteins [BR:
uar03036
]
Eukaryotic type
Nucleosome assembly factors
HMG (high mobility group) proteins
123797218
DNA repair and recombination proteins [BR:
uar03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Other BER factors
123797218
MMR (mismatch excision repair)
Other MMR factors
123797218
Exosome [BR:
uar04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
123797218
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HMG_box_2
HMG_box
HMG_WDHD1
DUF5575_C
RNA_pol_3_Rpc31
Motif
Other DBs
NCBI-GeneID:
123797218
NCBI-ProteinID:
XP_045660949
LinkDB
All DBs
Position
Unknown
AA seq
205 aa
AA seq
DB search
MGKGDPKKLRGKMSSYAFFVQTCQEEHKKKQPDASVNFSEFSKKRSEMWKTMSAKDKGKF
EDTAKADKAHNEREMKTYIPSKEETKKNPKDPSAHFSPPSAFSLFCSEYRPKVKGEHPSL
LINDVAKKLGEMWGKTASDNKQLHGKTAAKLQQRWEKDIAASRAKGKPDAAKKGVIKAEK
SKQKKQEEEDKEGEEDXEEDEDDDE
NT seq
618 nt
NT seq
+upstream
nt +downstream
nt
atgggcaaaggagatcctaagaagctgagaggcaaaatgtcatcatatgcattctttgtg
caaacttgtcaagaggagcacaagaagaaacagccagatgcttcagtcaacttctctgag
ttttctaagaagcgctcagagatgtggaagaccatgtctgctaaagacaaaggaaaattt
gaagatacggcaaaggcggacaaggcccataatgaaagagaaatgaaaacttatattccc
tctaaagaggaaacaaaaaagaatcccaaggatcccagtgcacactttagtcctccttcg
gccttttccttgttttgttctgagtatcgcccaaaagtcaaaggagaacatcccagccta
ttaattaatgacgttgcaaagaaactgggagagatgtggggtaaaactgcctcagataac
aagcagctgcatggaaagacggctgctaagctgcagcaaaggtgggaaaaggatattgct
gcatcccgagctaaaggaaaacctgatgcagcaaaaaagggagtcatcaaggctgagaaa
agcaagcaaaagaagcaagaggaggaagacaaggaaggtgaagaggatngagaagaagat
gaagatgatgatgaataa
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integrated database retrieval system
