Ursus americanus (American black bear): 123797475
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Entry
123797475 CDS
T07931
Symbol
SCAF8
Name
(RefSeq) SR-related and CTD-associated factor 8 isoform X1
KO
K13191
RNA-binding protein 16
Organism
uar
Ursus americanus (American black bear)
Brite
KEGG Orthology (KO) [BR:
uar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
uar03021
]
123797475 (SCAF8)
03041 Spliceosome [BR:
uar03041
]
123797475 (SCAF8)
Transcription machinery [BR:
uar03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
123797475 (SCAF8)
Spliceosome [BR:
uar03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
123797475 (SCAF8)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CID
RRM_1
Transformer
DUF3525
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
123797475
NCBI-ProteinID:
XP_045661353
LinkDB
All DBs
Position
Unknown
AA seq
1291 aa
AA seq
DB search
MEAVKTFNSEDCASTPACTDCFSSSMDTRSILYSLNDYKPPISKAKMTQITKAAIKAIKF
YKHVVQSVEKFIQKCKPEYKVPGLYVIDSIVRQSRHQFGQEKDVFAPRFSNNIISTFQNL
YRCPGDDKSKIVRVLNLWQKNNVFKSEIIQPLLDMAAGIPPPVVTPVLASTTAAMSNTPG
TPVTPVTPANVVQGLPDPWVSQITNTDTLAAVAQILQSPQGQQLQQLIQTLQLQQQKPQP
SILQALDAGLVVQLQALTAQLTAAAAAANTLNPLEQGVAFNKKLMDRFDFGEDSEHSEEP
KKEISASQLSHVSESVNNSIFHQIAEQLQQQNLEHLRQQLLEQQQPQKATPQDSQEGTFG
SEHSASPSQGSSQQHFLEPEVNLDDSIDIQQQDMDIDEGQDGVEEEIFEQEAKKVAVRSR
SRTHSRSRSRSPRKRRSRSRSGSRKRKHRKRSRSRSRERKRKSSRSYSSERRAREREKER
QKKGLPPIRSKTLSVCSTTLWVGQVDKKATQQDLTNLFEEFGQIESINMIPPRGCAYVCM
VHRQDAFRALQKLSSGSYKIGSKVIKIAWALNKGVKTEYKQFWDVDLGVTYIPWEKVKVD
DLEGFAEGGMIDQETVNPEWETVKSSEPVKETVQTTQSPTPVEKETVVTTQAEVFPPPVA
MLQIPVAPAVPAVSLVPPAFPVSMPVPPPGFSPIPPPPFLRASFNPSQPPPGFMPPPVPP
PVVPPPSIPPVVPTSLVQPPLSMTPETVKDVGFGGLVLPGGSVASSLATSTLPAGNVFNP
PTKQADPEEKVPHLIDHQISSGENTRAVIPNDIPSSPAILGGQPSNVTSNSGILGVQRPN
VSSNSEIIGIRPSNVSSSSGIIGAQPPNILNNSGILGLQPPTVSSSSGLLGVLPPNIPNN
SGLIGVQPPNVPNAPGLLGTQPPAGPQNLPPLNLSSQRMPTMPMLDIRPGLIPQTPGPRF
PLIQPGIPPQRGIPPPSVLDSALHPPPRGPFPPGDIFSQPERPFLVPGRQSVDNVANPEK
RIPLGNDNIQQEGDRDYRFPPIEARESISRPPPVDVRDVVGRPIDPREGPGRPPLDGRDH
FGRPPVDIRENLVRPGIDHLGRRDHFGFNPEKPWGHRDFDEREHRVLPVYGGPKGLHEER
GRFRSGNYRFDPRSGPWNRGFGQEVHRDFDDRRRPWERQRDRDDRDFDFCRDINGNRLGR
DRIQNTWVPPPHPRVFDFFEGATSQRKGDNVPQVNGENTERHAQPPPLPVQNDPELYEKL
TSSSEINKEKSDTVADIESEPVVESTETEGT
NT seq
3876 nt
NT seq
+upstream
nt +downstream
nt
atggaggctgtgaaaaccttcaatagcgaggattgtgcctctactcctgcttgtacagac
tgcttttccagcagcatggacacaagaagcatattgtattccctgaatgactacaaacca
cccatttctaaagcgaaaatgacccaaattactaaggcagccatcaaagctattaagttc
tataaacatgtggtacagagtgttgagaaattcattcagaaatgtaaaccggaatacaag
gtacctggactttatgttattgactccatcgtacgacaatctcgacatcagtttggtcaa
gaaaaggacgtgtttgcacccagatttagcaataacatcattagtactttccagaattta
tatcgttgccctggggatgacaagagtaaaatagtgagagtattaaacttatggcagaag
aataatgtgtttaagagtgagattattcagcctcttttggatatggcagcagggattcct
cccccagttgtcacacctgttttagccagtactactgctgctatgagcaacaccccagga
actcctgtgacacctgttactccagccaatgtggtccaaggtctgccggatccgtgggta
tctcagataacaaacacagatacacttgcagcagtagctcaaatcttacaaagtcctcag
ggccaacagcttcagcagttaatacaaactttacaactacaacagcagaagcctcagcct
tctattctgcaggccctggacgctggtctcgttgtacagttgcaggctctcacagcacag
cttactgctgcagctgcagcggccaacaccctgaaccccttggaacagggagtggctttc
aacaagaagttgatggataggtttgattttggggaagattctgagcatagtgaagaaccc
aaaaaggaaatttcagcttctcaactttctcatgtttcagaatctgtgaacaattccatt
tttcatcagatagctgaacaactacagcagcaaaaccttgaacatctcagacagcaactc
ctagaacagcaacagcctcaaaaggcaacccctcaggatagtcaagagggaacatttgga
tcagagcattcagcctcaccatcacagggtagcagtcaacagcatttccttgaacctgaa
gtgaatttggatgattctatagatattcagcaacaggatatggatatagatgaagggcaa
gatggagtagaagaggagatctttgaacaagaagcaaagaaagtggctgttcgctcaaga
tcaagaacacattcacgatctcgctcaagatcaccaagaaaacgaaggtctcggtcacga
tctggttcccgaaagcgtaaacacagaaagcgatcacgctcacgctcaagagaaagaaag
aggaaatcatcacgttcatactcaagtgaaaggagagctagagagagggagaaagaacga
cagaagaagggattacctccaattagatctaaaacattaagtgtatgtagtactactttg
tgggttggccaggtggataagaaggcgacccagcaagatttaaccaatctgtttgaagag
tttggacaaattgaatccattaatatgattcctcccaggggctgtgcttacgtctgcatg
gttcatcgacaagatgcttttcgggctcttcagaaacttagttccggatcatataaaatt
gggtccaaggtcattaagattgcttgggctttaaacaaaggtgtaaaaacagaatataaa
caattctgggatgtggatcttggagttacatatataccatgggaaaaagttaaagtggat
gacttggaaggttttgcagaaggaggcatgattgaccaggaaactgtaaatcctgagtgg
gaaactgtgaaaagctcagaacccgttaaagagacggtccagacaactcagagcccaact
ccagttgaaaaggagacagtggtcaccacccaggcagaggtttttcctccacctgttgct
atgttacagattccagtagcgccagccgtgcctgcagttagtttagtcccaccagcattt
cctgtctcaatgccagttcctcctcctggattcagtccaatccctccacctccttttctg
cgagcgagttttaacccttcacaaccacctcctggtttcatgccacctccagttccacca
cctgttgtaccaccacccagcattccaccagtggtaccaacatctttagtgcagccacca
ttatccatgactccagaaactgtcaaagatgttggatttggcggtcttgttttgccgggt
ggttctgttgccagcagtcttgctacttccactcttccagctggaaatgtttttaatcct
ccaactaaacaagcagaccctgaagaaaaagtacctcatcttatagaccaccagatttct
tctggtgaaaataccagagcagtgattccaaatgatattccaagtagccctgcaatttta
ggaggacagccatcaaatgtgacaagcaattctggaattctgggagtccaaagaccaaat
gtatcgagtaattctgaaattattggaatccggccatctaatgtttccagtagttctggg
attattggagcccagccaccaaatattctaaataactctggaattttgggactacagcca
ccaactgtgtcaagtagttctggacttctgggagtgctacccccaaatatccctaataat
tccggacttataggagtacagccaccaaatgttccaaatgcccccggacttttgggaaca
caaccaccagctgggcctcaaaatttaccccctttaaatctctctagtcaaaggatgccc
acaatgccaatgttagacattcgtccaggactaataccacagacgcctggaccaagattt
cctttaatacagcctggaattccaccccaacggggaatccctcccccatcggtacttgat
tcagctcttcatccgcctccccgtggtccttttcctccaggagatatttttagtcaacca
gaaagaccttttctagttcctggaagacaaagtgtagacaatgttgctaatccagaaaaa
aggataccacttgggaatgataacattcaacaggaaggagatagagattaccggtttcct
cccattgaagccagggaaagcattagtagacctcccccggtggatgttagggatgtggtt
ggacggcctatagatccaagagaaggtcctggaaggcctccattagatggtagggatcat
tttggaagacctcctgtcgatattagagagaatcttgtgaggccaggcatagatcatctt
ggtcgaagagaccactttggctttaatccagagaagccctgggggcatagagattttgat
gagagagaacatcgggttctacctgtctatggtggtccaaaaggcttacatgaagaaaga
ggtagatttcggtctggaaactatcgatttgatcctagaagtggtccttggaacagagga
tttggacaagaagttcacagagattttgatgaccgcagaagaccctgggagaggcaaagg
gatagggatgacagagattttgatttctgcagagatattaatggaaaccgtcttggacga
gatagaattcaaaacacctgggtcccccctcctcatcctcgggtttttgatttttttgaa
ggggccacttctcaacgaaaaggtgataacgtgcctcaggttaatggtgaaaataccgag
agacatgcccagccaccacctttaccagtacagaatgatcctgaactttatgaaaaactg
acatcttcaagtgaaataaacaaggagaagagtgacacagttgctgatatagaaagtgaa
ccagtggtagaaagcacagaaactgaggggacataa
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integrated database retrieval system
