Ursus americanus (American black bear): 123798275
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Entry
123798275 CDS
T07931
Symbol
BARD1
Name
(RefSeq) BRCA1-associated RING domain protein 1 isoform X1
KO
K10683
BRCA1-associated RING domain protein 1
Organism
uar
Ursus americanus (American black bear)
Pathway
uar03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
uar00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
123798275 (BARD1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
uar03019
]
123798275 (BARD1)
04121 Ubiquitin system [BR:
uar04121
]
123798275 (BARD1)
03036 Chromosome and associated proteins [BR:
uar03036
]
123798275 (BARD1)
03400 DNA repair and recombination proteins [BR:
uar03400
]
123798275 (BARD1)
Messenger RNA biogenesis [BR:
uar03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Negative regulators of mRNA 3' end processing
123798275 (BARD1)
Ubiquitin system [BR:
uar04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
BRCC complex
123798275 (BARD1)
Chromosome and associated proteins [BR:
uar03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Regulators of centriole replication
123798275 (BARD1)
DNA repair and recombination proteins [BR:
uar03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-core complex
123798275 (BARD1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-RING_6
Ank_4
Ank
Ank_2
Ank_5
Ank_3
BRCT
BRCT_2
zf-RING_5
ANK_LRRK2
Ank_KRIT1
zf-C3HC4
RTT107_BRCT_5
Motif
Other DBs
NCBI-GeneID:
123798275
NCBI-ProteinID:
XP_045662621
LinkDB
All DBs
Position
Unknown
AA seq
774 aa
AA seq
DB search
MPGNRQPRVRSGNEPRPAPTMEPEGRGAWAHSRAALDRLEKLLRCSRCTHILREPVCLGG
CEHIFCSNCVSDCIGTGCPVCYTPAWIQDVKINRQLDSMIQLCSKLRNLVHGDKLSDLKK
DASRENLFNDAESKKNSIKMWFSPRSKKVRYVVSKISVQTQPQVINDENARQASMYEFVS
TSPPTGVSERAKKASTKSGKKQKKKTLAEINQEWNLEADKEDGELDSKEEFKEKLVSFCS
QPSVIAGPQTNGEIDLLASGSVTESQCFSSFAEVSLPLAEQIESPEMEGRNEDVTPQKNV
CGNPLPPEPSLPSGPNGRRGLRSRRSSPVAKRCRSSLPGTSRQHIVLSENKPLPGHSSPP
SGKLKVGDTLRRKNSNVSDESLSLSPGTPPSALNSPSYRRMMSSPAAVKLSPSSLMAVKR
NHRGETLLHIASIKGDIPSVEYLLQNGSDPNVKDHAGWTPLHEACNHGHVKVVELLLQHK
ALVNTTGYQNDSPLHDAAKNGHLDIVKLLLSYGASRNAVNIFGLRPVDYADGENMKSLLL
LPEKNESSSTRHCSVQMSTGQRRDGPLVLIGSGLSSEQQKMLSELAAILKAKKCAEFDNT
VTHVIVPGDTVQSTLKCMLGILNGCWILKFEWVKACLQRKACEQEEKYEIPEGPQRSRLN
KEQLLPKLFDGCYFYFGGTFKHHPKDNLIKLVAAAGGQVLSRKPKPDSDVTQTINTVAYH
ARPDSDQRFCTQYIIYEDLSNHRSERVRQGKVWMAPSSWFIDCVMSFELLPLDS
NT seq
2325 nt
NT seq
+upstream
nt +downstream
nt
atgccgggcaaccggcagccgagggtccgctccggaaacgagcctcgtcccgcgcccacc
atggagccggaggggcgcggggcctgggcccacagccgcgccgcgctcgaccggctggag
aagctgctgcgctgctcacgttgcactcatattctgagggagcctgtgtgtttagggggg
tgtgagcacatcttctgtagtaattgtgtaagtgactgcattggaaccggatgtccagtg
tgttatactccagcctggatacaagatgtgaagataaatagacagttggacagcatgatc
cagctttgtagtaagcttcggaatttggtacatggtgataagctttcagatttgaaaaaa
gatgcatctagggaaaatttatttaatgacgcagaaagtaagaagaattcaataaaaatg
tggtttagtcctcgaagtaagaaggtcagatatgttgtgagtaaaatttcagtgcaaact
cagcctcaagtgataaatgatgagaatgctcggcaggcttccatgtacgaatttgtttct
acaagtcctccaacaggtgtttctgagagggctaaaaaggcttctacaaaatctggaaaa
aaacaaaaaaagaaaactttagctgaaatcaaccaagaatggaacttagaggcagataaa
gaagatggtgaacttgactccaaagaggaatttaaggaaaagctggtgtctttctgtagc
caaccgtctgttattgctggtcctcagacaaatggtgaaatagacttactagcaagtggc
tctgtcacggaatcacagtgttttagcagcttcgctgaagtctctttaccattagctgag
caaatagagtctccagaaatggagggcaggaatgaagacgtgactccccagaagaatgtc
tgcgggaatcctcttccacctgagccgtccttgccatcaggtcccaacgggcgacgtggg
cttcgcagcagacggtccagtcccgttgctaagaggtgcagaagcagccttcctggcacc
agtaggcagcacatagtgctttcagaaaacaaaccgttgcctggccactcctcaccaccc
tcaggcaaactcaaagttggtgacacattaaggaggaaaaacagtaatgtatcagacgag
tccctgagcctctcaccaggtacaccgccttctgcgctgaacagcccgagttacagacgg
atgatgtctagccccgcagccgtgaagctgtcacccagtagccttatggctgtgaaaaga
aatcatagaggagagactctgcttcatattgcttcaattaagggcgacataccttctgtt
gagtacctcttacaaaacggaagcgacccaaatgttaaagaccatgctggatggacacca
ttgcacgaagcctgcaatcatgggcatgtgaaggtggtggagttgttgctgcagcacaag
gcgttggtgaacaccactggctatcagaacgactcgccgcttcatgatgccgccaagaat
gggcacttggatatagtcaagctcttactttcctacggagcctccaggaacgccgttaac
atatttggtttgcggcctgtggattatgcagacggtgaaaatatgaaatcactattgctg
ctaccagagaagaatgaatcatcatcaactcgccattgctcagtacagatgagcactggt
cagcgtagggatggacctcttgtgcttataggcagtgggctttcttcagaacaacaaaaa
atgctcagtgagctggcagcaattcttaaggctaaaaaatgtgccgaatttgacaataca
gtaactcatgtcattgttcctggggatacagttcaaagtaccctaaaatgtatgcttggg
attctcaatggatgctggatcttaaaatttgaatgggtgaaagcatgtctacagagaaaa
gcatgtgaacaggaggaaaagtacgagattcctgaaggaccacagcgaagcaggctcaac
aaggaacagctgttgccaaagctgtttgatgggtgctacttctattttgggggaaccttc
aaacaccatccaaaggacaaccttattaagcttgttgctgcagctgggggccaggtcctc
agtagaaagcccaagccagacagtgacgtgactcagaccatcaatacggtcgcgtaccac
gcaagacccgattccgatcagcgcttctgcacacagtatatcatctacgaagatttgtct
aatcatcgctcagagagggttcggcagggcaaagtctggatggctccttccagctggttt
atcgattgtgtgatgtcctttgagttgctccctcttgacagctga
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integrated database retrieval system
