Ursus americanus (American black bear): 123798405
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Entry
123798405 CDS
T07931
Symbol
CHD9
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 9 isoform X1
KO
K14438
chromodomain-helicase-DNA-binding protein 9 [EC:5.6.2.-]
Organism
uar
Ursus americanus (American black bear)
Brite
KEGG Orthology (KO) [BR:
uar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
uar03036
]
123798405 (CHD9)
Chromosome and associated proteins [BR:
uar03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
123798405 (CHD9)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
BRK
Helicase_C
Chromo
ResIII
DEAD
HDA2-3
Motif
Other DBs
NCBI-GeneID:
123798405
NCBI-ProteinID:
XP_045662734
LinkDB
All DBs
Position
Unknown
AA seq
2903 aa
AA seq
DB search
MTDPMMDFFDDANLFGETLEGLSDDAFVQPGPVSLVDELNLGAEFEPLHIDSLNHVQGTP
THQKITDYEQLNQFDSMKFHQVNQPFGSPAEHVLSPHSQFNCSPIHPQNQPNGLFPDVAD
GSPMWGHQTATSISNQNGSPFHQQGHSHSMHQNKSFVVHHDFALFQAGEQQTQCTSLRSQ
QNRNNLNPGQNSLSQSKNFMDVNVSGPHRVSVNHPSQIPNASTSQQSLSMQQFSQTSNPS
VHFLKCSSHQEGNFNGPSPNMTSCSVSNSQQFSSHYSFSSNHVSPNSLLQASAVLAPNHT
NQTLSDFTGSNSFSPHRGIKQESTQHMLNPNTSLNSNNFQMLHSSHPQGNYSNSKLSPVH
MNFPDPVDSGTQMGHFNDHVETNGFSSLEENLLHQVESQTEPFTGLDPEDLLQEGLLPQF
DEAAFGQDHSSHVLDHDLERQFTSHLVTRPSDMAQTQLHSQARSWHSSLSNHQHLHDRNR
LYLQRQPPSSKKSDGSGTYTKLQNTQVRIMSEKKQRKKVESESKQEKANRIISEAIAKAK
ERGERNIPRVMSPENFPSASVEGKEEKKGRRMKSKPKDKESKRTKTCSKLKEKAKIGKLI
ITLGKKQKRKNESSDEISDTEQIPQHTCKEEDSQKRRSNRQIKRKKYAEDAEGKQSEEEV
KGSMKIKKNSAPLPGEQPLQLFVENPSEEDAAIVDKILSSRIVKKEVSPGVMIDTEEFFV
KYKNYSYLHCEWATEQQLLKDKRIQQKIKRFKLRQAQRAHFFADMEEEPFNPDYVEVDRV
LEVSFCEDKDTGEPVIYYLVKWCSLPYEDSTWELKEDVDLAKIEEFEQLQASRPDTRHLD
RPPANIWKKIDQSRDYKNGNQLREYQLEGLNWLLFNWYNRRNCILADEMGLGKTIQSITF
LYEILLTGIRGPFLIIAPLSTIANWEREFRTWTDINVVVYHGSLISRQMIQQYEMYFRDS
QGRIIRGAYRFQAIITTFEMILGGCGELNAIEWRCVIIDEAHRLKNKNCKLLEGLKLMNL
EHKVLLTGTPLQNTVEELFSLLHFLEPLRFPSESTFMQEFGDLKTEEQVQKLQAILKPMM
LRRLKEDVEKKLAPKEETIIEVELTNIQKKYYRAILEKNFSFLSKGAGQTNVPNLVNTMM
ELRKCCNHPYLIKGAEEKILGEFRDTYNPAASDFHLQAMIQSAGKLVLIDKLLPKMKAGG
HKVLIFSQMVRCLDILEDYLIHKRYLYERIDGRVRGNLRQAAIDRFSKPDSDRFVFLLCT
RAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIGQNKAVKVYRLVTRNSYEREMFD
RASLKLGLDKAVLQSMSGRESNVGGIQQLSKKEIEDLLRRGAYGAIMEEEDEGSKFCEED
IDQILLRRTKTITIESEGRGSTFAKASFVASGNRTDISLDDPNFWQKWAKKAEIDIDAIS
GRNSLVIDTPRIRKQTRPFSATKDELAELSEAESEGDEKPKLRRPCDRSNGYGRTECFRV
EKNLLVYGWGRWREILSHGRFKRQLNEHDVEIICRALLAYCLVHYRGDEKIKGFIWDLIT
PTEDGQTRELQNHLGLSAPVPRGRKGKKVKTQTSSFDIQKAEWLRKYNPEQLLQDEGYKK
HIKHHCNKVLLRVRMLYYLKQEVIGNECQKVFDGVDASDIDVWVPEPDHSEVPAEWWDFD
ADKSLLIGVFKHGYEKYNTIRADPALCFLERVGKPDEKAVAAEQRANDYMDGDVEDPEYK
PAPAIFKDDIEDDVSSPGDLVIADGDGQLMEGDKIYWPTQSALTTRLRRLITAYQRTNKN
RQIQQIQPTFSVPASVMQPLYEEATLNPKMAAKIERQQRWTRREEADFYRVVSTFGVVFD
PDRGQFDWTKFRAMARLHKKTDDSLEKYLYAFMSMCRRVCRLPSKEELVDPNIFIQPITE
ERASRTLYRIELLRKVREQALRHPQLFERLKLCHPNPDLPVWWECGPHDRDLLIGAAKHG
VSRTDYHILRDPELSFMAAQRNYSQSKMAHSRTSTPLLQQYQVALSASPLTSLPRLLDAK
GIILEDMKVKSENLKEEPQSSEEESMSSEETRTLIKSEPVSPKNGVLPQATGDQKSGGKG
ETDRRMVAARTEPLTPNPASKKQRVHKRGSESSSESDSDSERSSCSSRSSSSSSSSSSCS
HSRSGSSSSSSSSCSSASSSSSSSSSSSSSSSSSSSEESDSEEEEVQKRAEGTPHVKAYD
EESVASLSTTQDETQDSFQMNNGTPESAYILQGGYMLAASYWPKDRVMINRLDSICQTVL
KGKWPSARRSYDANTVASFYTTKLLDSPGAATEYSEPSVPTPPGAGVKEEHDQSTQMSKV
KKHVREKEFTVKIKDEGGLKLTFQKQGLAQKRPLDSEDGAPGQQQYLARLRELQSASETG
LANFPKSVPVSGTSIQSTLGANGVRLDNQPIVKKRRGRRKNVEGVDILFFNRNKPPNHVT
LGLTTSQVSTGINPALSYTQPQGIPDTESPVPVINLKDGTRLAGDDAPKRKDLEKWLKEH
PGYVEDLGAFIPRMQLHEGRPKQKRHRCRNPNKLDVNSLTGEERVQLINRRNARKVGGAF
APPLKDLCRFLKENSEYGVAPEWGDVVKQSGFLPESMYERILTGPVVREEVSRRGRRPKS
GIAKATAAAAAAATATSVSGNPLLANGLLPGVDLTTLQALQQNLQNLQSLQVTAGLMGMP
AGLSSGGEAKNVAAMFPMLLSGMTGLPNLLGMGGLLTKPTESGTEEKKGNDSKELEGKKE
RTESQNSENGGENSVSSSPSTSSTAALSTAAAASPLALNPLLLSNILYPGMLLTPGLNLH
MPTLSQSNTFDVQKNKNSDLGSSKSQEVKEEDSRVRDQEDKGGTEASPLNENSTDEGSEK
ADASSGSDSTSSSSEDSDSSNED
NT seq
8712 nt
NT seq
+upstream
nt +downstream
nt
atgacagatccaatgatggacttttttgatgatgccaatctttttggtgagaccttagaa
ggtttgtcagatgatgcatttgtacagccaggacctgtttcactcgttgatgaattgaac
ttgggtgcagaatttgaacctttgcacatagactcactgaaccatgtacaaggtactcca
acacatcagaagataactgattatgagcagttaaatcagtttgattcaatgaaatttcac
caagtcaatcagccttttggtagcccagctgaacatgtgttatctccacactctcagttt
aattgttctccgatccacccccaaaaccagcccaatggtttgtttccagatgtagcagat
ggcagtccaatgtggggccatcagacagctaccagcatttccaatcaaaatgggtctcct
tttcaccaacaaggacattctcactctatgcatcaaaataaaagctttgtggtacaccat
gactttgccttatttcaggctggtgagcaacaaacacagtgcacttcactacgctcacaa
caaaacagaaataatcttaacccagggcagaattctctcagccagtctaaaaattttatg
gatgttaatgtttccggtccacacagagtcagtgttaaccacccatcacaaatccctaat
gcatctacgtcgcaacagtctctttcaatgcagcaattttcccaaacgtcaaatccttca
gttcacttcctcaagtgtagcagtcatcaagaagggaatttcaatggaccctctccaaat
atgacttcttgttctgtcagtaattcacagcagttttcttcacattattccttttccagt
aatcacgtctcaccaaacagtcttctgcaggcctctgcagtacttgcacctaatcataca
aatcagactttatctgattttaccggaagtaactccttttcacctcatcggggaatcaaa
caagaatccactcagcatatgctaaatcccaatacatcgttgaattcaaataatttccaa
atgttgcattcatcacatcctcagggtaattatagcaattcaaaattatctcctgtgcac
atgaacttcccagatcctgttgactcaggaactcaaatgggccatttcaatgatcacgtg
gaaactaatggcttttcgtctttagaagagaatttacttcatcaagtggagtctcagact
gagccattcacaggacttgacccagaagatctcctccaggagggtcttcttccccaattt
gatgaggcagcatttggacaagatcattcaagtcatgttttagatcatgaccttgaacgg
cagtttacttcacatcttgtaactcggccttcggatatggctcaaacacagctgcatagt
caggctcggagttggcactcttcactttccaatcatcagcatttacatgacagaaatcgc
ctatatttacagcgacagcctccatcttccaagaagagtgatggttctgggacatacact
aagttgcagaatacccaggtgaggatcatgtctgagaagaagcagaggaaaaaagtggaa
tcagaaagcaagcaagaaaaggcgaatcggatcatatcagaggccatagcaaaagcaaag
gaacgtggggaacgcaatattccacgagtaatgagtcctgaaaactttcctagtgcttca
gttgaaggaaaagaggaaaagaaaggtagacggatgaaatccaagccaaaggacaaagag
agcaaaagaacaaaaacttgttctaagttaaaagagaaggcaaaaattggcaaactcatt
attacattgggtaagaaacaaaaaagaaagaatgagtcttcagatgagatatctgataca
gagcagataccacagcacacttgcaaagaggaggactctcaaaaaagaagatcaaatcgt
caaattaaaagaaaaaaatatgcagaagatgcagaagggaaacaatcggaagaagaggtt
aaaggttctatgaaaataaaaaagaattcagctcctttacctggtgaacagcctttacaa
ttatttgtggagaatccaagtgaagaagatgcggcgattgtagacaaaatactatcttcc
agaattgtgaaaaaggaagtatcacctggagtgatgattgatacagaagaattttttgta
aaatacaagaattactcctatcttcactgtgagtgggccacagagcagcagcttttgaaa
gataaaaggatccagcagaaaatcaaacgattcaaattgagacaagcacaaagagcacat
ttttttgcagatatggaagaggaaccatttaacccagactacgttgaagtagacagagtg
ttagaagtctctttttgtgaagataaagatactggtgagcctgttatttactacttagta
aagtggtgctcattaccatatgaagatagtacgtgggaactaaaagaagacgtagatctt
gcaaaaatagaagagtttgaacagttacaagcttcaaggcctgacacaagacatttggat
cgtcctcctgctaatatttggaaaaaaattgatcaatccagggactataaaaatggcaat
caactcagggaatatcaactggaaggactcaactggctcttattcaattggtacaataga
cgaaactgcattttagcagatgaaatgggtcttggcaaaaccattcaatcaattacattc
ctctacgaaatccttctgactggtataagaggacctttcctgattattgctccactttct
actattgcaaactgggagagagaatttcgtacatggactgatattaatgttgtggtttat
catgggagcctgattagcagacagatgatacagcaatatgagatgtacttcagggactca
caggggcgtatcattcgaggagcttacagattccaagccatcatcaccacttttgaaatg
attcttggtggctgtggagagcttaatgcaattgaatggcgatgtgtgattattgatgaa
gcacataggttaaaaaataaaaattgtaaactgctagaaggtctgaaactcatgaatctg
gaacacaaggtgcttctgactggcacacctctccaaaatacagttgaagaactattcagt
cttcttcactttttggaacctttaaggtttccttctgaatcaacgtttatgcaagaattt
ggggatctgaaaacagaggaacaggtgcagaaacttcaggctatcctgaagccgatgatg
ttgagacggttaaaagaagatgtggaaaagaagctggcaccaaaggaagaaaccatcatt
gaagtggaacttactaacattcagaagaaatactaccgggctattttggagaagaacttc
tcatttttatccaaaggagcagggcagaccaatgtccctaacttggtcaataccatgatg
gagctcaggaagtgctgcaatcatccatatcttatcaaaggtgctgaggagaaaatactt
ggagaatttagagatacatataatccagctgcttctgattttcatcttcaagcaatgatc
cagtctgctggtaaattggtccttattgataaattacttcccaaaatgaaagccggaggt
cataaagtgctcatcttctctcagatggtacgctgccttgacatcctggaggactatctc
attcataaaagatatttatacgagcgaatcgatggaagagttagagggaatcttcgacaa
gctgctatagatcgatttagtaaacctgattcagatcgatttgttttccttctgtgtacc
cgagctggtgggttgggcatcaacctaactgctgctgatacatgtataatttttgattct
gattggaatcctcagaatgacctgcaggcccaagctcgttgccacagaatcggtcagaat
aaagcagttaaagtctaccgactagtaactcgtaactcatatgagagagagatgtttgac
cgagccagtctgaaactgggtctagataaggctgtgttacagagcatgagcggaagagaa
agtaatgttggtggtattcagcagctttccaaaaaggaaatagaagatctgcttcgaaga
ggtgcttatggtgccattatggaggaagaagatgagggctctaaattctgtgaggaggat
atcgatcagattttactacgtaggacaaaaactattacaattgagtcagaaggacgtggg
tcaacatttgctaaggctagttttgtggcatctggaaatcggacagatatttccttagat
gatcccaacttctggcagaaatgggctaagaaggcagaaatagatatagatgccatcagt
ggcagaaacagcttggttattgacactccaagaattaggaagcaaacaagaccctttagc
gcaacaaaagatgaattggctgaattatctgaagccgaaagtgaaggagatgaaaagccc
aaactccggagaccctgtgaccgttccaatggctatggaagaactgaatgctttagagta
gagaaaaatcttctcgtttatggatggggccggtggagagagattctgtctcacggtcgt
tttaagagacagctgaacgagcatgatgtagaaataatttgccgagccctcttagcatat
tgccttgttcactaccgaggagatgagaaaattaaaggcttcatatgggatctcattact
ccaactgaagatgggcagacacgagagctacagaatcatctaggtctatcagcccctgta
cccaggggtcgaaaaggaaagaaagtaaagactcaaacaagctcatttgatatacagaaa
gcagaatggcttcgaaaatacaatcctgagcagctacttcaagatgaaggatacaaaaaa
catataaaacaccactgtaataaggttttgcttcgtgtaagaatgctgtattatctaaag
caagaagtcattggaaacgagtgtcaaaaagtatttgatggagttgatgcaagtgacatt
gatgtttgggtcccagaaccagaccactcagaagttcctgctgaatggtgggatttcgat
gctgataagtcacttcttattggagtttttaaacatggttatgaaaaatataacactatc
cgagcagacccagcgttatgcttcttggaaagagtgggaaaacctgatgagaaggcagtc
gctgcagaacagagggcaaatgattatatggatggggacgtggaagatccagaatacaaa
cctgccccagctatctttaaagatgatatagaggatgatgtttcttcaccaggagatctt
gttatagcagatggagatggtcaactgatggaaggtgataaaatttattggccaactcaa
tcagctttaactacacgtttgaggcgtctcatcactgcatatcagcgtactaataaaaac
agacaaatccagcagatacagcctactttctcagtgcccgccagtgtaatgcagcctctt
tacgaagaagccactctcaatcctaaaatggcagccaagatagaaaggcagcaaagatgg
acgagaagagaagaagctgacttttatagagttgtgtctacatttggagtggtatttgac
cctgacagaggccagtttgattggacaaaatttagagctatggctaggctgcataagaaa
actgatgatagcttggagaagtatttgtacgcgttcatgtctatgtgtcggagggtttgt
cgtcttccttccaaagaagaattggtggatccaaatatttttatccagccaatcacagaa
gaacgtgcttctaggactttgtaccgtattgaacttctaaggaaagtacgggaacaggcc
ctccggcatccacaattgtttgaacgcttgaagctttgccatccaaatccagacttacca
gtctggtgggaatgtggccctcatgatagggacttgctcattggagctgctaaacatggg
gtgagccgaacagactatcacattcttcgtgatcctgaactctcctttatggcagctcaa
aggaactacagtcaaagtaagatggctcattcaaggacttctaccccacttttacagcaa
tatcaagtagcactttctgcttctcctcttacctctctacctaggctcctagatgctaaa
ggtattattctagaggatatgaaagttaaaagtgaaaatcttaaagaggagcctcagtct
tctgaagaagaatctatgtcttctgaggaaaccaggacactaataaagtctgagcctgta
agtccaaagaacggggttttaccgcaggccactggagaccagaaatctggtggaaaaggt
gaaacagacagacgcatggttgcagccagaacagaacccctaactccaaacccagcttct
aagaaacagcgagtccacaaaagaggatccgaatctagttctgagtctgactctgattct
gagagatcatcctgttcttccagatcatcttcttcctcgtcttcctcctcctcttgttcc
cactctcgatcaggctctagttcttcttcatcctcctcttgttcttcagcatcgtcttca
tcctcatcctcatcctcttcctcatcatcctcctcttcatcttcatcagaagaaagtgac
agtgaagaagaagaagtccaaaagcgagcagaaggtacccctcacgtgaaagcctatgat
gaagaaagtgttgcgtcactgagcactacccaggacgagacccaggatagtttccagatg
aacaatgggacaccagagtcagcttacatcttacaagggggatacatgctagcagcttca
tattggccaaaggaccgcgtgatgatcaaccggctggacagtatttgtcaaacagtgctg
aaagggaagtggccttcagctagaagaagttacgatgccaacacagtggcttctttctat
accacaaaactgctggacagtcctggcgcagctacagaatatagcgaacccagtgtaccc
actcccccaggtgccggcgttaaagaagagcacgatcagtcaacacagatgtcaaaggtg
aagaagcatgtacgagaaaaggagtttacagtgaaaatcaaagacgaaggtggtttgaag
ttgacatttcagaagcaagggcttgctcagaaaagaccattggatagtgaagacggtgcc
ccggggcagcagcagtacctcgctcggcttcgggagctgcagagtgcgtcagagaccggc
ctcgccaatttccccaaatccgtgccagtatcaggtacttccattcagtcaacccttggt
gccaatggagttagattagacaaccagcctatagtcaaaaaaaggcggggaagaaggaag
aatgtagaaggtgttgacatcctcttttttaacagaaataaaccacctaaccatgttact
ttaggcttaaccacctcacaggtttctacagggataaatccagcactgtcctatactcaa
cctcaaggaattcctgatacggaaagtccagttccagttattaacctcaaagatgggaca
agacttgcaggcgatgatgcgccaaagagaaaggatttggaaaaatggcttaaggagcac
ccaggttatgtggaagatttaggagcttttattcctagaatgcagcttcatgaagggagg
cccaaacaaaaaaggcatcgttgcagaaaccctaataaactcgatgttaatagtcttact
ggagaagaacgtgttcagctgattaacagaagaaatgccagaaaggttggaggtgcattt
gctccccctttgaaagatctgtgtagattcctgaaagaaaattcagaatatggagtagct
cctgaatggggagatgttgttaagcagtctggatttcttccagaaagtatgtatgagcgt
attctcactggtcctgttgtgagagaggaggtcagcaggcgggggcgacggcctaaaagt
ggaatcgccaaggccacggcggcagcggcggcagcggcaactgccaccagcgtgtccggc
aatcctttgttagccaatggattacttccaggtgtggatctcacaacccttcaggcctta
caacaaaacctacaaaacttgcagtctctgcaagtcaccgcagggctaatgggaatgcct
gccggcctttcttctggaggagaagctaaaaacgtggccgccatgttccccatgctgctg
tcaggaatgactggcttaccaaatctgctgggcatgggaggactcctgacaaagcctacc
gaatctggaactgaagagaaaaagggaaatgactcgaaggagctagaaggaaaaaaagaa
aggacagagagtcaaaattcagagaacgggggagaaaactccgtgtcgagttctccttcc
acgtcctctactgcggcattaagtacagcggccgctgccagcccgttagctcttaaccca
ctactgctgtcgaatatactctacccagggatgctgctcactccaggccttaatctccac
atgccaactttgtcccagtccaatacttttgacgtacagaaaaacaaaaacagtgacttg
ggctcgtctaagtcgcaggaagtaaaggaggaagattccagagttagagatcaggaagac
aaagggggaactgaagcaagtcctctcaacgagaacagcacagatgagggttcagaaaaa
gccgacgcttcgtctggatctgacagtacgtcatcgtcgtccgaggattcagattctagt
aacgaagactga
DBGET
integrated database retrieval system
