KEGG   Ursus americanus (American black bear): 123798420
Entry
123798420         CDS       T07931                                 
Symbol
AMFR
Name
(RefSeq) E3 ubiquitin-protein ligase AMFR
  KO
K10636  E3 ubiquitin-protein ligase AMFR [EC:2.3.2.36]
Organism
uar  Ursus americanus (American black bear)
Pathway
uar04137  Mitophagy - animal
uar04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:uar00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    123798420 (AMFR)
 09140 Cellular Processes
  09141 Transport and catabolism
   04137 Mitophagy - animal
    123798420 (AMFR)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:uar04121]
    123798420 (AMFR)
Enzymes [BR:uar01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.36  RING-type E3 ubiquitin transferase (cysteine targeting)
     123798420 (AMFR)
Ubiquitin system [BR:uar04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    123798420 (AMFR)
  Multi subunit type E3
   ERAD complex
    123798420 (AMFR)
   LMBR1L-GP78-UBAC2 complex
    123798420 (AMFR)
SSDB
Motif
Pfam: TPR_SYVN1_N G2BR zf-RING_2 zf-C3HC4_2 CUE zf-C3HC4 zf-RING_11 zf-C3HC4_3 zf-RING_UBOX zf-ANAPC11 zf-rbx1 zf-RING_5 zf-RING_16 zf-C3HC4_4 Prok-RING_4 zf-RING_Vps41 zf_RING_Vps8 RING_Ste5 SVIP
Other DBs
NCBI-GeneID: 123798420
NCBI-ProteinID: XP_045662776
LinkDB
Position
Unknown
AA seq 643 aa
MPLLFLERFPWPSLRTYTGLSGLALLGTIVSAYRALSQPEAGPGEPESPTAPVQTEPAVP
ARPSAGGPRARDVAQYLLSDSLFVWVLVNTACCVLMLVAKLIQCIVFGPLRVSERQHLKD
KFWNFIFYKFIFIFGVLNVQTVEEVVMWCLWFAGLVFLHLMVQLCKDRFEYLSFSPTTPM
SSHGRVLSLLVAMLLSCCGLAVVCCITGYTHGVHTLAFMAAESLLVTVRTAHVILRYVIH
LWDLNHEGTWEGKGTYVYYTDFVMELTLLSLDLMHHIHMLLFGNIWLSMASLVIFMQLRY
LFHEVQRRIRRHKNYLRVVGNMEARFAVATPEELAVNNDDCAICWDSMQAARKLPCGHLF
HNSCLRSWLEQDTSCPTCRMSLNIADNNRVREDQQGDNLDENLVPVAAAEGRPRLNQHNH
FFHFDGSRIASWLPSFSVEVMHTTNILGIAQASNSQLNAMAHQIQEMFPQVPYHLVLQDL
QLTRSVEITTDNILEGRIQVPFPTQRSDGIRPALNSPMERPNGDQEEGEASVQTERVPLD
LSPRLEEALDLSEAEVEAGEGEDFEARGSRFSKSADERQRMLVQRKDDLLQQARKRFLSR
SSEVDAASESCPLSEGTTSDPVTLRRRMLAAAAERRLQKQQLS
NT seq 1932 nt   +upstreamnt  +downstreamnt
atgccgctgctcttcctggagcgcttcccctggcccagcctccgcacctacacgggcctc
agcggcctggccctgctcggcaccatcgtcagcgcctaccgcgccctcagccagcccgag
gccgggcccggggagccggagtcgccaacggccccggtgcagacggagccggccgtgccc
gcccggcccagcgccggcggcccccgggcccgcgatgtggcccagtacctgctctcagac
agcctgttcgtgtgggttctggtaaatactgcatgctgtgttttgatgttggtggctaag
ctaatccagtgtatcgtgtttggccctcttcgagtgagcgagaggcagcacctcaaagac
aagttctggaattttattttctacaagttcattttcatttttggtgtgctgaatgtgcag
acggtggaagaggtggtcatgtggtgcctctggtttgctggacttgtatttctacatctg
atggttcagctctgcaaggaccgatttgaatacctttccttttctcccaccacacccatg
agtagccacgggcgagttctgtccctgctggtggcaatgctgctttcttgctgtggatta
gcggtcgtctgttgtatcacaggctacacccatggggtgcacacgctggctttcatggca
gcggagtctcttcttgtgacagtgaggactgctcatgtgattttacgatacgtaattcac
ctctgggacctcaaccacgaagggacgtgggaaggaaaaggaacctatgtctattacaca
gattttgtcatggagctcactctcttgtccctggacctcatgcaccatattcacatgttg
ttgtttggcaacatctggctgtccatggccagcctggtcatcttcatgcagctgcgctac
ctgttccacgaagtgcagcgtcgcatccgccggcacaagaactacttgcgcgtggtgggc
aacatggaggcccggtttgcggttgcaacgccagaggagctggctgtcaacaacgacgac
tgtgccatctgctgggactccatgcaggccgcgaggaaactgccctgcggacatcttttc
cacaactcctgccttcgttcctggctagaacaagacacctcctgcccaacatgcagaatg
tctcttaatattgccgacaataaccgggtccgggaggaccagcaaggggacaacttggat
gagaatttggtgccggtagcagccgctgaaggccgacctcgcctaaaccaacacaatcac
ttcttccactttgatgggtcccggatcgccagctggctgccgagtttttcagtcgaagtg
atgcataccaccaacattctcggcattgcgcaggccagcaactcgcagctgaacgccatg
gctcatcagattcaagaaatgtttccccaggttccataccacctcgtgctgcaggacctc
cagctgacacgctcggtagaaataacaacagacaacattttagaaggacggattcaagta
ccttttcccacacagcgctcagatggcatcaggcccgcactgaacagtcccatggaaagg
ccaaacggagaccaggaggagggagaagcttccgtgcagaccgagcgtgtgccgctagac
ctcagtcctcggctggaggaggccttggatctcagcgaggcggaggtggaggccggtgag
ggggaggacttcgaggcccggggcagccgcttctccaagtctgcggacgagaggcagcgc
atgctggtgcagcggaaggacgacctcctgcagcaggctcgcaagcgtttcctgagcaga
agttctgaagtcgacgccgcctccgagagctgccccttgtcggaaggcacgacctctgac
cccgtgaccctgcgtcgcaggatgctggccgcggccgccgaacggaggctccagaagcag
cagctctcctag

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