Ursus americanus (American black bear): 123798880
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Entry
123798880 CDS
T07931
Symbol
CPSF2
Name
(RefSeq) cleavage and polyadenylation specificity factor subunit 2
KO
K14402
cleavage and polyadenylation specificity factor subunit 2
Organism
uar
Ursus americanus (American black bear)
Pathway
uar03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
uar00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
123798880 (CPSF2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
uar03019
]
123798880 (CPSF2)
Messenger RNA biogenesis [BR:
uar03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
123798880 (CPSF2)
U7-dependent histone pre-mRNA processing factors
123798880 (CPSF2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Lactamase_B_6
CPSF100_C
Beta-Casp
RMMBL
Lactamase_B
Anti-Pycsar_Apyc1
Lactamase_B_2
Motif
Other DBs
NCBI-GeneID:
123798880
NCBI-ProteinID:
XP_045663547
UniProt:
A0A452SVV4
LinkDB
All DBs
Position
Unknown
AA seq
782 aa
AA seq
DB search
MTSIIKLTTLSGVQEESALCYLLQVDEFRFLLDCGWDEHFSMDIIDSLRKHVHQIDAVLL
SHPDPLHLGALPYAVGKLGLNCAIYATIPVYKMGQMFMYDLYQSRHNTEDFTLFTLDDVD
AAFDKIQQLKFSQIVNLKGKGHGLSITPLPAGHMIGGTIWKIVKDGEEEIVYAVDFNHKR
EIHLNGCSLEMLSRPSLLITDSFNATYVQPRRKQRDEQLLTNVLETLRGDGNVLIAVDTA
GRVLELAQLLDQIWRTKDAGLGVYSLALLNNVSYNVVEFSKSQVEWMSDKLMRCFEDKRN
NPFQFRHLSLCHGLSDLARVPSPKVVLASQPDLECGFSRDLFIQWCQDPKNSIILTYRTT
PGTLARFLIDNPSEKITEIELRKRVKLEGKELEEYLEKEKLKKEAAKKLEQSKEADIDSS
DESDVEEDIDQPSAHKTKHDLMMKGEGSRKGSFFKQAKKSYPMFPAPEERIKWDEYGEII
KPEDFLVPELQATEEEKSKLESGLTNGDEPMDQDLSDVPTKCISTTESIEIKARVTYIDY
EGRSDGDSIKKIINQMKPRQLIIVHGPPEASQDLAECCRAFGGKDIKVYMPKLHETVDAT
SETHIYQVRLKDSLVSSLQFCKAKDAELAWIDGVLDMRVSKVDTGVILEEGELKDDGEDS
EMQVDAPSDSSVIAQQKAMKSLFGDDEKETGEESEIIPTLEPLPPHEVPGHQSVFMNEPR
LSDFKQVLLREGIQAEFVGGVLVCNNQVAVRRTETGRIGLEGCLCQDFYRIRDLLYEQYA
IV
NT seq
2349 nt
NT seq
+upstream
nt +downstream
nt
atgacatctattatcaaattaactaccctctctggggttcaagaagagtctgctctttgc
tatcttctgcaagttgatgagtttcgatttctgttggactgtggctgggatgagcacttt
tctatggatattatagattccctgaggaagcacgttcaccaaattgatgcggtactgttg
tcccaccccgatccccttcatctcggtgccctcccgtacgccgttgggaagttgggtctg
aactgtgctatctacgcgaccattcctgtttataaaatggggcagatgttcatgtatgat
ctttaccagtctcgacacaatacagaagactttacactctttacgttagatgatgtggat
gcagcctttgataaaatacaacagttaaaattctctcagattgtgaatttgaaaggtaaa
ggacatggcttgtctatcacacctctgcccgctggtcatatgataggtggaacaatatgg
aaaatagtcaaagatggagaagaagaaattgtttacgcagttgactttaaccacaagagg
gagatccatttaaatggatgttccctggaaatgctaagcagaccctccctgcttatcaca
gattcctttaatgctacgtacgtgcagcctaggagaaaacagagagacgagcaacttctg
acaaatgtcctggaaacacttcgaggtgatggaaatgtcttaatagcagtggacactgca
ggcagagttttggaacttgctcaactccttgatcaaatctggagaactaaagatgcagga
ctgggcgtctactcactggcactcctcaataatgtcagctataatgtggtggagttttcc
aagtcccaggtagaatggatgagtgacaaattgatgagatgttttgaagacaaaagaaat
aatccatttcagtttcgccatctctctttatgtcatggtctttctgacttggctcgggta
cctagccccaaagtggtactcgccagccagcccgacctggaatgtggcttttcaagggat
ctcttcattcagtggtgtcaggaccctaaaaactcaatcattctaacttacagaactact
cctgggactttagcacgtttcctaattgataatccttctgaaaaaattacagaaatagag
ttgaggaaacgtgtgaagcttgaagggaaagaactagaagaatacttggaaaaagagaaa
ctaaagaaagaagcggcaaaaaaacttgagcagtcaaaagaggcagacatagattccagt
gatgagagtgatgttgaggaagacattgaccagccgtcggctcataagactaagcatgat
ctgatgatgaaaggtgaaggtagtcgtaaaggaagtttcttcaaacaggctaaaaagtct
taccctatgtttcctgccccagaagaaagaattaaatgggatgaatatggagaaattatc
aaaccagaggatttcttagtgccagaacttcaagcgactgaagaagagaaaagcaaatta
gaatctggcttgacaaatggagatgaacccatggatcaggatttatctgatgttcctacc
aagtgtatttctacaacagagtctattgaaataaaagccagggttacttacatagactat
gaaggacgctccgatggagattccattaaaaagatcattaatcagatgaaaccacgacag
ttgatcattgtccacggaccaccagaggccagtcaggatctcgcagagtgctgccgtgca
ttcggtgggaaagatattaaagtgtacatgccaaagctgcacgaaacagttgacgccact
agtgaaactcacatctaccaggtgagattgaaagattcgcttgtcagctcccttcagttt
tgtaaggcaaaagatgctgaattagcttggatagatggtgtcttggacatgagagtttcc
aaagtggatacaggagttattttagaagaaggtgaactgaaggatgatggagaagactca
gagatgcaggtggacgctccttcggattccagcgttatagcacaacagaaggccatgaag
agtctgttcggggatgatgagaaagagacaggtgaagaaagcgagatcattccgaccttg
gaacccttacccccccacgaggttcctggacatcagtcagtttttatgaacgaaccaagg
ctgtcagacttcaagcaagttcttttacgggaggggattcaagcagaatttgtaggaggt
gtgcttgtttgcaacaaccaagtagcagtccgtagaacggaaactggacgcattggatta
gaaggctgcctttgtcaagatttttataggataagagaccttttatatgaacagtatgcc
attgtgtaa
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