Ursus americanus (American black bear): 123799065
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Entry
123799065 CDS
T07931
Symbol
VPS16
Name
(RefSeq) vacuolar protein sorting-associated protein 16 homolog
KO
K20180
vacuolar protein sorting-associated protein 16
Organism
uar
Ursus americanus (American black bear)
Pathway
uar04140
Autophagy - animal
uar04148
Efferocytosis
uar05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
uar00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
123799065 (VPS16)
04148 Efferocytosis
123799065 (VPS16)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
123799065 (VPS16)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
uar04131
]
123799065 (VPS16)
Membrane trafficking [BR:
uar04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
123799065 (VPS16)
Hops complex
123799065 (VPS16)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Vps16_N
Vps16_C
Motif
Other DBs
NCBI-GeneID:
123799065
NCBI-ProteinID:
XP_045663940
LinkDB
All DBs
Position
Unknown
AA seq
839 aa
AA seq
DB search
MDCYTANWNPLGDSAFYRKYELYSMDWDLKEELRDCLVAAAPYGGPIALLRNPWRKEKAA
SVRPVLEIYSASGLPLASLLWKSGPVVSLGWSAEEELLCVQEDGVVLVYGLHGDFRRHFS
MGNEVLQNRVLDARIFHTEFGSGVAILTGAHRFTLSANVGDLKLRRMPEVPGLQSAPSCW
TALCQDRVAHILLAVGPDLYLLDHAACSAVTPPGLAPGVSSFLQMAVSFTYRHLALFTDT
GYIWMGTASLKEKLCEFNCNIRAPPKQMVWCSRPRSKERAVVVAWERRLMVVGDAPESIQ
FVLDEDSYLVPELDGVRIFSRSTHEFLHEVPVASEEIFKIASMAPGALLLEAQKEYEKES
QKADEYLREIQELGQLTQAVQQCIEAAGHEHRPDMQKSLLRAASFGKCFLDRFPPDSFVR
MCQDLRVLNAIRDYHIGIPLTYSQYKQLTIQVLLDRLVLRRLYPLAIQICEYLRLPEVQG
VSRILAHWACYKVQQKDVSDEDVARAINQKLGDTPGVSYSDIAARAYGCGRTELAIKLLE
YEPRSGEQVPLLLKMKRSKLALSKAIESGDTDLVFTVLLHLKNELNRGDFFMTLRNQPMA
LSLYRQFCKHQELETLKDLYNQDDNHQELGSFHVRASYAAEERIEGRVAALQTAADAFYK
AKNEFAAKATEDQMRLLRLQRRLEDELGGRFVDLSLHDTVTTLVLGGHSKRAEQLARDFR
IPDKRLWWLKLTALADLEDWEELEKFSKSKKSPIGYLPFVEICMKQHNKYEAKKYASRVG
PEQKVKALLLVGDVAQAADVAIEHRNEAELTLVLSHCTGATDAATADKIQRTRAQAQKK
NT seq
2520 nt
NT seq
+upstream
nt +downstream
nt
atggactgctacacggcgaactggaacccgctcggggactctgccttttaccggaaatat
gagctgtacagcatggactgggacctgaaggaggagctcagggactgcctggtagccgct
gctccctatgggggccccattgcactgttgaggaacccgtggcggaaggagaaggcggcc
agtgtacggccagtgcttgagatctattctgcctccggcctgcctctggccagtctgctg
tggaagagtgggcccgtggtgtccctaggctggtcagctgaggaggagctgctctgcgtg
caggaggatggtgtagtgctggtttacgggcttcatggcgacttccggagacacttcagc
atgggcaatgaggtgctgcagaaccgggttctagacgcacggatcttccacactgagttt
ggttcgggggtggccatccttactggggcccaccgctttaccctcagtgccaatgtgggt
gatctcaaacttcgccggatgccagaggtgccaggtctgcagagtgcaccctcgtgctgg
accgcactgtgccaggaccgagttgcacacattcttctggctgtggggcctgatctttac
cttctcgaccatgcagcctgctcggcagtgacgccccctggcctggcccctggagtgagc
agcttcctgcagatggcggtctccttcacctaccgacacctggcactcttcacggacacg
ggctacatctggatggggacggcgtcactcaaggagaagctgtgtgagttcaactgcaac
atccgggcccccccgaagcagatggtctggtgcagccgtcctcgcagcaaagagagggct
gtcgtggtggcctgggagaggcggctgatggtggtgggtgacgcacctgagagcatccag
tttgtgctggacgaagactcctacctggtacctgagctggatggggtccgcatcttctct
cgtagcacccacgagttcctgcatgaggttccagtggccagtgaggagatcttcaaaatt
gcctcgatggcccctggagcactattgttggaggcccagaaagagtacgagaaggagagc
cagaaggcagatgagtacctccgggagatccaggagctggggcagctgacccaggctgtg
cagcagtgcattgaggctgcgggacacgagcaccggccagacatgcagaagagtctgctc
agggcggcctcctttggaaagtgtttcctcgacagatttccacctgacagcttcgtacgc
atgtgtcaggacctgcgtgtgctcaatgccattcgggactaccacatcgggatccccctc
acttacagccaatataagcagctcaccatccaggtgttgctggacaggctggtgttgcgg
aggctttaccctctggcgatccagatctgtgagtacctgcgccttcctgaagtgcagggc
gtcagcaggatcctggcccactgggcctgctacaaggtgcaacagaaggatgtgtccgac
gaggatgttgctcgggccattaaccagaagctgggggacacgccaggtgtctcttactct
gacattgctgcgcgggcctatggctgtggccgcacagagctggccatcaagctgctggag
tatgagccacgctctggggagcaggtaccccttctcctaaagatgaagagaagcaaactg
gcactgagcaaggccatcgagagtggggacactgatctggtgttcacggtgttactgcac
ctgaagaatgagctaaaccggggagattttttcatgactcttcggaaccagcccatggcc
ctgagtttgtaccgacagttctgtaaacatcaagagctagagacactgaaggacctttac
aaccaggatgacaaccaccaggagctgggcagcttccacgtccgagccagctatgctgca
gaggagcgtatcgaggggcgagtcgcagctctgcagacggcagctgatgccttctacaag
gccaagaatgagttcgcagccaaggccacggaggatcaaatgcggctcctgcggctgcag
cggcgcctggaagacgagctggggggccgtttcgtggacctgtctctgcacgacacggtt
accaccctcgtcctcggtggccacagcaagcgtgcagagcagctggcacgtgacttccgc
attccggacaagaggctctggtggctgaagctgactgccctggcagatctggaagactgg
gaggagctagagaagttttctaagagcaagaaatcgcccattggctacctgccctttgtt
gagatctgcatgaagcaacacaacaaatatgaggccaagaagtatgcctcccgcgtgggt
cctgagcagaaggtcaaggccttgcttctcgttggggatgtggctcaggccgcagacgtg
gccattgagcaccggaatgaagcagagctgaccctcgtattgtcccactgcactggagcc
acagatgcggccacggccgacaagattcagcggactagggcacaagcccagaagaagtga
DBGET
integrated database retrieval system
