Ursus americanus (American black bear): 123799148
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Entry
123799148 CDS
T07931
Symbol
PDZRN3
Name
(RefSeq) E3 ubiquitin-protein ligase PDZRN3 isoform X1
KO
K15682
ligand of Numb protein X 3/4 [EC:
2.3.2.27
]
Organism
uar
Ursus americanus (American black bear)
Brite
KEGG Orthology (KO) [BR:
uar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
uar04121
]
123799148 (PDZRN3)
Enzymes [BR:
uar01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
123799148 (PDZRN3)
Ubiquitin system [BR:
uar04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Ligand of Numb proteins
123799148 (PDZRN3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PDZ
PDZ_6
PDZ_2
zf-C3HC4_2
zf-C3HC4
zf-RING_2
zf-RING_UBOX
zf-C3HC4_3
Sina_ZnF
zf-TRAF
zf-C3HC4_4
zf-RING_5
TRAF3_RING
Prok-RING_4
PDZ_Tricorn
CEP104_ZnF
zf-RING_10
Motif
Other DBs
NCBI-GeneID:
123799148
NCBI-ProteinID:
XP_045664057
LinkDB
All DBs
Position
Unknown
AA seq
1066 aa
AA seq
DB search
MGFELDRFDGDVDPDLKCALCHKVLEDPLTTPCGHVFCAGCVLPWVVQEGSCPARCRGRL
SAKELNHVLPLKRLILKLDIKCAHAARGCSRVVKLQQLPEHLERCDFAPARCRHAGCGQV
LLRRDVEAHMRDACDARPVGRCQEGCGLPLTHGEQRAGGHCCARALRAHNAALQARLGAL
HKALKKEALRAGKREKSLVAQLAAAQLELQMTALRYQKKFTEYSARLDSLSRCVAAPPGG
KGEETKSLTLVLHRDSGSLGFNIIGGRPCVDNQDGSSTEGIFVSKIVDSGPAAKDGGLQI
HDRIIEVNGKDLSRATHDQAVEAFKTAKEPIVVQVLRRTPRTKMFTPPSESQLVDTGTQT
DITFEHIMALTKMSSPTPPVLDPYLLPEEHPSAHEYYDPNDYIGGMHQEMDREELELEEV
DLYRMNSQDKLGLTVCYRTDDEDDIGIYISEIDPNSIAAKDGRIREGDRIIQINGIEVQN
REEAVALLTSEENKNFSLLIARPELQLDEGWMDDDRNDFLDHLHMDMLEEQHHQAMQFTA
SVLQQKKHEEDGGTTDTATILSNQHEKDSGVGRTDESTRNDESSEQENNGDDALASSTPL
AGQRKLTCSQDTLGSGDLPFSNESFLSADCADADYLGIPVDECERFRELLELKCQAKSGS
PYGLYYASSPLDASKSDPESVDKELELLNEELRSIELECLSIVRAHKMQQLREQYRESWM
LHHSGFRNYNTSVDVRRHELSDITELPEKSDKDSSSAYNTGESCRSTPLTLEMSPDNSLR
RAAEGSSCAGSEGAAGAAEAYGPSPKNLLAITEDPEGGSASSYSPPPPRELEPGQPPESR
ERRPSDDSGSPGPKLGGSYLSPFPHSPYKHAHIPAHAQHYQSYMQLIQQKSAVEYAQSQM
SLVSMCKDLSAAGPPEARMEWKVKVRSDGTRYITKRPVRDRLLRERALKIREERSGMTTD
DDAVSELKLGRYWSKEERKQHVVKAKEQRRRREFMMQSRLDCLKEQQAADDRKEMNILEL
SHKKMMKKRNKKIFDNWMTIQELLTHGTKSPDGTRVYNSFLSVTTV
NT seq
3201 nt
NT seq
+upstream
nt +downstream
nt
atgggcttcgagctggaccgcttcgacggcgacgtggacccggacctgaagtgcgcactg
tgccacaaggtcttggaggacccgctgaccacgccgtgcggccacgtcttctgtgccggc
tgcgtgttgccttgggtggtgcaggagggcagctgcccggcgcgctgccgcggtcgcctg
tcggccaaggagctcaaccacgtcctgccgctcaagcgcctcatcctcaagctggacatc
aagtgcgcgcacgcggcgcgcggctgcagccgggtggtcaagctgcagcagctgccagag
cacctcgagcgctgcgacttcgcgcccgcgcgctgccgccacgcgggctgcggccaggtg
ctgctgcggcgcgacgtggaggcgcacatgcgcgacgcgtgcgacgcgcggccggtgggc
cgctgccaagagggctgcgggctgcccctgacgcacggcgagcagcgcgcgggcggccac
tgctgcgcgcgggccctgcgggcgcacaacgcggcactgcaggcccgcctgggcgcgctg
cacaaggcgctcaagaaggaggcgctgcgcgccggcaagcgcgagaagtcgctggtggcg
cagttggccgcggcgcagctggagctgcagatgaccgccctgcgctaccagaagaagttc
accgaatacagcgcgcgtctcgactcgctcagccgctgcgtggccgcgccgcccggcggc
aagggtgaagaaaccaaaagtttgactcttgtcctgcatcgggactctggctccctggga
ttcaatattattggtggccggccgtgtgtggacaaccaagatggatcgtccactgaagga
atctttgtatccaaaatagttgacagtgggcccgcggccaaggacggaggcctgcaaatt
catgacaggattattgaggtcaacggtaaagacttatccagagcgactcatgaccaggct
gtggaagctttcaagaccgccaaagagcccattgtggtacaggtgctgaggagaacgcct
cggaccaaaatgttcacgcctccatcagagtcgcagctggtggacacgggaacccaaact
gacatcaccttcgagcacatcatggcgctcaccaagatgtcctctcccaccccgcctgtg
ctggatccctatctcctgccagaggagcatccctcggcccacgagtactatgaccccaat
gactacattggaggcatgcatcaggaaatggacagggaggagctggagttggaggaagtg
gatctctacagaatgaacagccaggacaagctgggcctcaccgtgtgctaccggacagat
gatgaagatgacattgggatttatataagtgagatcgaccctaacagcatcgcggccaag
gatgggcgcatccgagaaggagaccgcattatccagattaatgggatagaggtacagaac
cgtgaagaggctgtggctctcctaaccagtgaagaaaacaagaacttttccttactgatt
gcaaggcccgaactccagctggacgagggctggatggacgatgaccgaaacgactttctg
gaccacctgcacatggacatgctggaggagcagcaccaccaggccatgcagttcacggcc
agcgtgctgcagcagaagaagcatgaagaagacggggggaccacagatacagccaccatc
ctgtccaaccagcacgagaaggacagcggcgtggggcgcacggacgagagcacgcgcaat
gacgagagctcggagcaggagaacaacggcgacgacgccctcgcgtcgtccaccccgctg
gccgggcagaggaagctcacgtgcagccaggacaccctgggcagcggcgacctgccgttc
agcaacgagtccttcctgtcggccgactgcgccgacgccgactacctgggcatccccgtg
gacgagtgcgagcgcttccgggagctgctggagctcaagtgccaggccaagagcggcagc
ccctacggcctgtactacgccagcagcccgctggacgccagcaagagcgaccccgagagc
gtggacaaggagctggagctgctgaacgaggagctgcgcagcatcgagctggagtgcctg
agcatcgtgcgggcgcacaagatgcagcagctccgggagcagtaccgcgagtcgtggatg
ctgcaccacagcggcttccgcaactacaacaccagcgtcgacgtccgcaggcacgagctg
tcggacatcaccgagctccccgagaaatccgacaaagacagctcgagcgcctacaacacg
ggcgagagctgccgcagcaccccactcaccctggagatgtcccccgacaactccctgagg
agagcggccgagggcagcagctgcgccggcagcgagggggccgcgggggccgcggaagcc
tacgggccgtcccccaagaacctgctcgccatcaccgaagaccccgaggggggcagcgcc
agcagctacagccctcccccgcctcgagagctggagcccgggcagcccccggagagcagg
gagcggaggcccagcgacgacagcgggagccccggccccaagctgggcggctcctacctg
tcgcccttcccgcactcgccctacaagcacgcgcacatcccggcgcacgcgcagcactac
cagagctacatgcagctgatccagcagaagtcggccgtggagtacgcgcagagccagatg
agcctggtgagcatgtgcaaggacctgagcgccgccggcccgccggaagccaggatggag
tggaaggtgaaggtgcgcagcgacggcacgcgctacatcaccaagcggccggtgcgcgac
cgcctgctgcgcgagcgcgcgctcaagatccgcgaggagcgcagcggcatgaccacggac
gacgacgcggtgagcgagctgaagctgggccgctactggagcaaggaggagaggaagcag
cacgtggtgaaggccaaggagcagaggcgccggcgcgagttcatgatgcagagccggctg
gattgcctgaaggagcagcaagcggccgacgacaggaaggagatgaacatcctggaactg
agccacaaaaagatgatgaagaagaggaataaaaagatatttgacaattggatgacaatc
caagaactcttaacccacggcacaaaatcacccgatggcacgagagtctacaattccttc
ttatccgtgactactgtataa
DBGET
integrated database retrieval system
