KEGG   Ursus americanus (American black bear): 123799208
Entry
123799208         CDS       T07931                                 
Symbol
SEC13
Name
(RefSeq) protein SEC13 homolog isoform X1
  KO
K14004  protein transport protein SEC13
Organism
uar  Ursus americanus (American black bear)
Pathway
uar03013  Nucleocytoplasmic transport
uar04141  Protein processing in endoplasmic reticulum
uar04150  mTOR signaling pathway
uar05014  Amyotrophic lateral sclerosis
Brite
KEGG Orthology (KO) [BR:uar00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    123799208 (SEC13)
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    123799208 (SEC13)
 09130 Environmental Information Processing
  09132 Signal transduction
   04150 mTOR signaling pathway
    123799208 (SEC13)
 09160 Human Diseases
  09164 Neurodegenerative disease
   05014 Amyotrophic lateral sclerosis
    123799208 (SEC13)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:uar03019]
    123799208 (SEC13)
   04131 Membrane trafficking [BR:uar04131]
    123799208 (SEC13)
Messenger RNA biogenesis [BR:uar03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     123799208 (SEC13)
Membrane trafficking [BR:uar04131]
 Protein recycling
  Rab GTPases and associated proteins
   Rab11 associated proteins
    123799208 (SEC13)
 Endoplasmic reticulum (ER) - Golgi transport
  Forward pathways
   Coat protein complex II (COP-II)
    123799208 (SEC13)
 Autophagy
  Other autophagy associated proteins
   SEACAT/GATOR2 complex
    123799208 (SEC13)
SSDB
Motif
Pfam: Beta-prop_THOC3 Beta-prop_IFT122_1st WD40 Beta-prop_WDR5 Beta-prop_WDR3_1st WD40_Prp19 WD40_CDC20-Fz WD40_WDHD1_1st Beta-prop_CAF1B_HIR1 Beta-prop_EML_2 Beta-prop_WDR3_2nd Beta-prop_EIPR1 WD40_MABP1-WDR62_2nd WDR55 WD40_Gbeta Beta-prop_RIG_2nd EIF3I ANAPC4_WD40 Beta-prop_NOL10_N Beta-prop_WDR90_POC16_2nd Beta-prop_WDR41 Beta-prop_Vps41 Beta-prop_EML NBCH_WD40 MIOS_WD40 PAC11
Other DBs
NCBI-GeneID: 123799208
NCBI-ProteinID: XP_045664190
LinkDB
Position
Unknown
AA seq 322 aa
MVSVINTVDTSHEDMIHDAQMDYYGTRLATCSSDRSVKIFDVRNGGQILIADLRGHEGPV
WQVAWAHPMYGNILASCSYDRKVIIWKEENGTWEKTHEHTGHDSSVNSVCWAPHDYGLIL
ACGSSDGAISLLTYTGEGQWEVKKINNAHTIGCNAVSWAPAVVPGSLIDQPSGQKPNYIK
KFASGGCDNLIKLWKEEEDGQWKEEQKLEAHSDWVRDVAWAPSIGLPTSTIASCSQDGRV
FIWTCDDTSGNTWSPKLLHKFNDVVWHVSWSITANILAVSGGDNKVTLWKESVDGQWVCI
SDVNKGQGSVSASVTEGQQNEQ
NT seq 969 nt   +upstreamnt  +downstreamnt
atggtgtcagtaattaacactgtggacacctcccatgaggacatgattcacgacgcccag
atggactactatggcacccgcctagcaacctgctcatcagacaggtccgtcaaaatcttc
gatgtgcgaaatggaggacagatcctcattgccgacctcaggggtcatgagggtcctgtg
tggcaagtggcttgggctcacccaatgtatggcaacatcctggcatcctgctcctatgac
cggaaagtcatcatctggaaggaggagaatggcacgtgggagaagacgcacgagcacacg
ggacacgactcctcagtaaactctgtgtgctgggccccccatgactacggcctcatactg
gcctgtgggagctcggatggggccatctccctgctgacgtacaccggagagggccagtgg
gaagtgaagaagatcaacaacgctcacactattggctgcaatgctgtcagttgggcccct
gctgttgtacctggaagcctcatagaccagccatcggggcagaagcccaactacatcaag
aagtttgcatcgggcggttgtgacaacctcatcaaactgtggaaggaggaggaggacggc
cagtggaaggaggaacagaagctagaagcgcacagtgactgggttcgagatgtggcctgg
gccccctccattggcctgcccaccagcaccatcgccagttgctcccaggacggtcgtgtg
ttcatttggacttgtgatgacacctcaggcaatacgtggtcacccaaactgttgcacaag
ttcaatgacgttgtgtggcatgtgagctggtccatcacggccaacatcctggctgtctcg
ggcggagacaacaaggtgaccctgtggaaggagtccgttgacgggcagtgggtgtgcatc
agcgatgtcaacaagggccagggttccgtgtctgcttccgtcacagagggccagcagaac
gagcagtga

DBGET integrated database retrieval system