KEGG   Ursus americanus (American black bear): 123799369
Entry
123799369         CDS       T07931                                 
Symbol
CSTF1
Name
(RefSeq) cleavage stimulation factor subunit 1 isoform X1
  KO
K14406  cleavage stimulation factor subunit 1
Organism
uar  Ursus americanus (American black bear)
Pathway
uar03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:uar00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    123799369 (CSTF1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:uar03019]
    123799369 (CSTF1)
Messenger RNA biogenesis [BR:uar03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Cleavage stimulation factor (CSTF) complex
     123799369 (CSTF1)
SSDB
Motif
Pfam: Beta-prop_WDR5 WD40 Beta-prop_THOC3 Beta-prop_IFT122_1st Beta-prop_WDR3_1st WD40_Prp19 WD40_CDC20-Fz WDR55 Beta-prop_EML_2 WD40_WDHD1_1st Beta-prop_WDR3_2nd Beta-prop_TEP1_2nd WD40_Gbeta CSTF1_dimer Beta-prop_CAF1B_HIR1 EIF3I Beta-prop_EML Beta-prop_WDR36-Utp21_2nd Beta-prop_WDR90_POC16_2nd Beta-prop_WDR36-Utp21_1st ANAPC4_WD40 WD40_MABP1-WDR62_2nd Beta-prop_RIG_2nd Beta-prop_WDR75_1st Beta-prop_NOL10_N NBCH_WD40 Beta-prop_TEP1_C Beta-prop_VPS8 ASA1 Beta-prop_EIPR1 Beta-prop_Aladin WDR90_beta-prop_4th Beta-prop_DCAF4 PAC11 CFAP251_N Beta-prop_IFT140_1st Beta-prop_DCAF12 Beta-prop_NWD2_C Beta-prop_NUP159_NUP214 DSE1_N Ge1_WD40 Beta-prop_HPS5 PROPPIN Frtz Beta-prop_WDR75_2nd DUF7099
Other DBs
NCBI-GeneID: 123799369
NCBI-ProteinID: XP_045664389
LinkDB
Position
Unknown
AA seq 450 aa
MSEAGRPDTGKEIVFLFSKMYRTKVGLKDRQQLYKLIISQLLYDGYISIANGLINEIKPQ
SVCAPSEQLLHLIKLGMENDDTAVQYAIGRSDTVAPGTGIDLEFDADVQTMSPEASEYET
CYVTSHKGPCRVATYSRDGQLIATGSADASIKILDTERMLAKSAMPIEVMMNETAQQNME
NHPVIRTLYDHVDEVTCLAFHPTEQILASGSRDYTLKLFDYSKPSAKRAFKYIQEAEMLR
SISFHPSGDFILVGTQHPTLRLYDINTFQCFVSCNPQDQHTDAICSVNYNPSANMYVTGS
KDGCIKLWDGVSNRCITTFEKAHDGAEVCSAIFSKNSKYILSSGKDSVAKLWEISTGRTL
VRYTGAGLSGRQVHRTQAVFNHTEDYVLLPDERTISLCCWDSRTAERRNLLSLGHNNIVR
CIVHSPTNPGFMTCSDDFRARFWYRRSTTD
NT seq 1353 nt   +upstreamnt  +downstreamnt
atgagcgaagcgggaaggcccgatactggcaaggaaattgtcttcctcttctccaagatg
tacagaaccaaagtgggcttgaaggaccgccagcagctctacaagctgatcattagccag
ctgctctacgacggctacatcagcattgctaatggcctcattaatgaaatcaagcctcag
tctgtttgtgcaccctcggagcagctcctgcatctcatcaaactaggaatggaaaatgat
gatactgcagttcagtatgcaattggtcgttcagatacagttgccccaggcacaggaatt
gacctggaatttgatgcagacgtccagactatgtccccagaggcttcagagtatgaaaca
tgctatgtcacatcccataaaggaccatgccgtgtagctacctacagtagagatgggcaa
ttaatagctactggatctgctgatgcttccataaagatacttgacacagaaagaatgttg
gccaaaagtgccatgccaatagaggtcatgatgaatgagactgcacaacagaacatggaa
aaccacccagtgattcgaacgctttatgaccacgtggatgaagtcacatgtctcgctttc
cacccaacagaacagatccttgcctctggttcaagggattatactcttaaattatttgat
tattccaaaccatctgcaaaaagagccttcaaatacattcaggaagctgaaatgttacgc
tccatctcttttcatccctctggagactttatacttgttgggactcagcatcctactctg
cggctttatgacatcaatacatttcagtgttttgtctcttgcaatcctcaagaccaacac
actgatgctatatgctccgtgaattacaatcctagtgccaatatgtatgtaactggtagc
aaggacggctgcatcaagttatgggatggtgtttcaaatcgatgcatcacaacttttgag
aaagcccacgatggtgctgaagtttgttctgccattttctccaaaaattctaaatacatt
ctctccagtggaaaagactctgtagctaaactttgggaaatatcaacaggacgaacactg
gtcagatacacaggtgccggcttgagcgggcggcaggtgcaccggacacaggccgtgttc
aaccacaccgaggactacgtgctgctgccggacgagaggaccatcagtctgtgctgctgg
gactctcgcacagccgagcgccggaacctgctctccctcggccacaacaacatcgtgcgc
tgcatagtgcattcgcccaccaaccccggcttcatgacgtgcagcgatgacttccgagca
cggttttggtaccggagatcaaccacagactag

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