Ursus americanus (American black bear): 123799534
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Entry
123799534 CDS
T07931
Symbol
RAG1
Name
(RefSeq) V(D)J recombination-activating protein 1
KO
K10628
V(D)J recombination-activating protein 1 [EC:
2.3.2.27
]
Organism
uar
Ursus americanus (American black bear)
Pathway
uar04068
FoxO signaling pathway
uar05340
Primary immunodeficiency
Brite
KEGG Orthology (KO) [BR:
uar00001
]
09130 Environmental Information Processing
09132 Signal transduction
04068 FoxO signaling pathway
123799534 (RAG1)
09160 Human Diseases
09163 Immune disease
05340 Primary immunodeficiency
123799534 (RAG1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
uar04121
]
123799534 (RAG1)
Enzymes [BR:
uar01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
123799534 (RAG1)
Ubiquitin system [BR:
uar04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
123799534 (RAG1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RAG1_imp_bd
RAG1_ZnH2
RAG1_RNase_H
RAG1_C
RAG1_pre-RNase_H
RAG1_ZnC2
RAG1
RAG1_DNA-bd
zf-RAG1
zf-C3HC4
zf-C3HC4_2
zf-RING_6
CurL-like_PKS_C
Motif
Other DBs
NCBI-GeneID:
123799534
NCBI-ProteinID:
XP_045664632
LinkDB
All DBs
Position
Unknown
AA seq
1043 aa
AA seq
DB search
MAVSLPPTLGLTPAPDEIQHPHIKFSEWKFKLFRVRSFEKAPEAAQVEKKVSSEGKPSLE
QSPAVPDQADGQKPALSQPALKTHPKFLKKSHDDGKTRDKAIHQANLRHLCRICGNSFKT
DGHNRRYPVHGPVDGKTQVLLRKKEKRATSWPDLIAKVFRIDVKADVDSIHPTEFCHKCW
SIMYRKFSSAPREVYFPRNATMEWHPHTPSCDICHTAHQGRKRKSHQPNVQLSKKLKTVV
DRARRARRHKRRAQARISTKEVMKKISSCGNIHLSTTLLAVDFPAHFVKSISCQICEHIL
ADPVETTCKHVFCRICILRCLKVMGSYCPCCQYPCFPTDLESPVKSFLSILNSLMVKCPA
KECNEEVSLEKYNHHVSSHKESKETFVHINKGGRPRQHLLSLTRRAQKHRLRELKLQVKA
FADKEEGGDVKAVCLTLFLLALRARNEHRQADELEAIMQGRGSGLQPAVCLAIRVNTFLS
CSQYHKMYRTVKAITGRQIFQPLHALRNAEKVLLPGYHPFEWQPPLKNVSSSTDVGIIDG
LSGLSSSVDDYPVDTIAKRFRYDSALVSALMDMEEDILEGMRAQDLDDYLNGPFTVVVKE
SCDGMGDVSEKHGSGPAVPEKAVRFSFTVMKITIARGSENVKVFEEVKPNSELCCKPLCL
MLADESDHETLTAILSPLIAEREAMKSSQLMLEMGGILRTFKFIFRGTGYDEKLVREVEG
LEASGSVYICTLCDATRLEASQNLVFHSITRSHSENLERYEVWRSNPYHESVDELRDRVK
GVSSKPFIETVPSIDALHCDIGNAAEFYKIFQLEIGEVYKNPNASKEERKRWQATLDKHL
RKKMNLKPIMRMNGNFARKLMTKETVEAVCELIPSEERHEALRELMDLYLKMKPVWRSSC
PAKECPESLCQYSFNSQRFAELLSTKFKYRYEGKITNYFHKTLAHVPEIIERDGSIGAWA
SEGNESGNKLFRRFRKMNARQSKCYEMEDVLKHHWLYTSKYLQKFMNAHNGYKNSGFTLS
SQSGIGDPLGLEDCPETQDSMEF
NT seq
3132 nt
NT seq
+upstream
nt +downstream
nt
atggctgtctctttgccacccaccctgggactcactcctgccccagatgaaattcagcac
ccacatattaaattttcagaatggaaatttaaactattcagggtgcgatcttttgaaaag
gcacctgaagcagctcaagtagaaaagaaagtttcctctgaggggaaaccctctctggag
caatctccagcagtcccagaccaggctgatggtcagaagccagctctgagtcaaccagca
ttaaaaactcaccctaagtttctgaagaaatcccatgatgatgggaaaacaagagacaaa
gcaatccaccaagccaaccttcgacatctctgccgtatctgtgggaattcttttaaaact
gatgggcacaataggagatatccagtccacgggcctgtcgatggtaaaacccaagtcctt
ttacggaagaaggaaaagagagccacttcctggccagaccttattgccaaggtcttccgg
attgatgtgaaagcagatgtggactccatccaccccactgagttctgccataagtgctgg
agcatcatgtacaggaagtttagcagcgccccacgtgaggtttacttcccaaggaatgca
accatggagtggcacccccacacaccctcctgtgacatttgccacactgcccaccaggga
cgcaagaggaagagtcatcagccaaacgtgcagctcagcaaaaaactcaaaaccgtggtt
gaccgagcgagaagagcccgtcggcacaagagaagagctcaggccaggattagcaccaaa
gaagtgatgaagaagatttccagctgcggtaatatacatcttagtaccacccttcttgca
gtggacttcccagcacactttgtgaaatccatctcctgccagatttgtgaacacattctg
gctgaccctgtggagaccacctgtaagcacgtgttttgcaggatctgcattctcagatgc
ctcaaagtcatgggcagctattgtccctgttgccagtatccctgcttccctactgacctg
gagagtccagtgaagtcctttctgagcatcttgaattccctgatggtgaaatgtccagcc
aaagagtgcaatgaggaggtcagcttggaaaagtataatcaccacgtctcgagccacaag
gaatccaaagagacttttgtgcatattaacaaagggggtcggccccgccagcatctcctc
tccttgacccggagggctcagaagcaccgcctgagggagctcaagctgcaagtcaaggct
ttcgctgacaaagaagaaggtggagatgtgaaagctgtgtgtctgaccttgttcctgctg
gcgctgagggcgaggaatgagcacagacaagcggatgagctggaggccatcatgcagggg
cggggctctgggctgcagccagctgtttgcttggccatccgtgtcaacaccttcctcagc
tgcagtcagtaccacaagatgtacaggactgtgaaagccatcaccgggaggcagattttc
cagcctttgcatgcgcttcggaatgccgagaaggtcctcctgccaggctaccaccccttt
gagtggcagccccctctgaagaacgtgtcctccagcactgacgtgggcattattgatggc
ctgtctgggctgtcctcctctgtggacgattaccccgtggacaccattgcgaagcggttc
cgctacgattcggctttggtgtctgctctgatggacatggaagaagacatcctggaaggc
atgagagcccaagaccttgatgactacctgaatggcccctttaccgtcgtggtgaaggag
tcttgcgacggaatgggagatgtgagcgagaagcacgggagcgggcccgcagttccagaa
aaggcagttcggttttcgttcacggtcatgaaaattaccatagcacgtggctcagaaaat
gtgaaggtgttcgaagaagtcaaacctaactctgaactgtgttgtaagcctctgtgtctc
atgctggcagatgagtctgaccacgagaccctgacggccatcctgagccctctcattgct
gagagggaggccatgaagagcagccaattaatgcttgagatgggaggcatccttcggact
ttcaagttcatcttcaggggcaccggctatgatgagaaactcgtccgggaagtcgaaggc
cttgaggcttctggctcagtatacatttgtaccctttgtgatgccacccgcttggaagcc
tctcaaaatcttgtcttccactccatcaccagaagccactctgagaacctggagcgctat
gaggtctggcgttccaacccgtaccacgagtctgtggacgaactgcgggatcgggtgaag
ggggtctcatcgaaacctttcatcgagacagtcccttccatagatgcactccactgcgac
attggcaatgcggccgagttctacaagattttccagctagagataggggaggtgtataag
aatcccaatgcctccaaagaggaaaggaaaagatggcaggctacgttggacaagcatctc
aggaagaagatgaacctcaagccgatcatgaggatgaatggcaactttgccaggaagctc
atgaccaaagagacggttgaagcagtgtgtgaattaattccctctgaggagaggcacgag
gctctgagagagctgatggacctttacctgaagatgaagcctgtatggcgatcgtcgtgt
cctgcgaaagagtgcccagaatccctctgccagtatagcttcaattcacagcgttttgct
gagctcctctctaccaagttcaagtatagatacgagggcaaaatcaccaattattttcac
aaaaccctggcacacgtccctgaaattattgagagagatggctccattggggcgtgggcg
agtgagggaaatgagtctggcaacaaactattcaggcgcttccgaaaaatgaatgccagg
cagtccaaatgctatgagatggaggatgtcttaaaacaccactggctctatacctccaaa
tacctgcagaagttcatgaatgctcataacgggtataaaaactctggatttaccttgagc
tcgcagtcaggcataggggacccgttaggtctagaggactgtccagaaactcaagattcg
atggaattctaa
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integrated database retrieval system
