Ursus americanus (American black bear): 123799695
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Entry
123799695 CDS
T07931
Symbol
POLR1A
Name
(RefSeq) DNA-directed RNA polymerase I subunit RPA1
KO
K02999
DNA-directed RNA polymerase I subunit RPA1 [EC:
2.7.7.6
]
Organism
uar
Ursus americanus (American black bear)
Pathway
uar03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
uar00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
123799695 (POLR1A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
uar03021
]
123799695 (POLR1A)
Enzymes [BR:
uar01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
123799695 (POLR1A)
Transcription machinery [BR:
uar03021
]
Eukaryotic type
RNA polymerase I system
RNA polymerase I
Core subunits
123799695 (POLR1A)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
RNA_pol_Rpb1_1
NOA36
Motif
Other DBs
NCBI-GeneID:
123799695
NCBI-ProteinID:
XP_045664814
LinkDB
All DBs
Position
Unknown
AA seq
1716 aa
AA seq
DB search
MLGSKNMPWRRLQGISFGMYSADELKKLSVKSITNPRYLDSLGNPSVNGLYDLALGPADS
KEVCSTCVQDFSNCSGHLGHIELPLTVYNPLLFDKLYLLLRGSCLNCHMLTCPRAVIHLL
VCQLRVLEVGALQAVFELERILNRFLEENADPTAFEIQEELEQYTAKIVQNNQLGSHGAH
VKNVCESKSKLIAYFWKAHMTAKRCPHCKTGRSVVRKEHNSKLTVTYPAMVHKKADQKDT
EPLGIEEAQMGKRGYLTPTSAQEHLTALWKNEGFFLNYLFSGLENVDMESRFNPSMFFLD
FLVVPPSRYRPVNRLGDQMFTNGQTVNLQAVMKDMVLIRKLLALMAQEQELPCEVAAPAK
DEDKDSSVVLDRSFLSMLPGQSLTDKLYNIWIRLQSHVNIVFDSEMDKLMMEKYPGIRQI
LEKKDGLFRKHMMGKRVDYAARSVICPDMYINTNEIGIPMVFATKLTYPQPVTPWNVQEL
RQAVINGPNVHPGASMVINEDGSRTALSAVDLTQREAVAKQLLTPATGAPKPQGTKIVCR
HVKNGDILLLNRQPTLHRPSIQAHHARILPEEKVLRLHYANCKAYNADFDGDEMNAHFPQ
SELGRAEAYVLACTDQQYLVPKDGQPLAGLIQDHMVSGANMTIRGCFFTREQYMELLYRG
LTDKVGRVKLFPPAILKPFPLWTGKQVVSTLLINIIPEDHIPLSLSGKAKISGKAWVQES
PRPVPGFNPDSMCESQVIIREGELLCGVLDKAHYGSSAYGLVHCCYEIYGGETSGKVLTC
LARLFTAYLQLYRGFTLGVEDILVKPKADVKRHRVIEESTHCGPRAVRAALNLPEAASCD
EVRGKWQDAHLGKDQRDFNMIDLKFKEEVNHYSNEINKACMPFGLHRQFPENNLQMMVQS
GAKGSTVNTMQISCLLGQIELEGRRPPLMASGKSLPCFEPYEFTPRAGGFVTGRFLTGIK
PPEFFFHCMAGREGLVDTAVKTSRSGYLQRCIIKHLEGLVVQYDLTVRDSDGSVVQFLYG
EDGLDIPKTQFLQPKQFPFLASNYEVIMKSKHLHEVLSRADPQKALRHFRAIKKWQSKHS
NALLRRGAFLNYSQKIQAAVKALNLEGGNQNGRSLGTHQILKLWGELDEQSRRKYQKKAA
PCPDPSLAVWRPDIYFASVSETFEKKMDDYSLEWASQAERSYEKSELSLDRLRTLLQLKW
QRSLCDPGEAVGLLAAQSIGEPSTQMTLNTFHFAGRGEMNVTLGIPRLREILMVASANIK
TPMMSVPVLNTKKALKRVKSLKKQLTRVCLGEVLEKIDVQESFCIGDKQDKFQVYQLRFQ
FLPHAYYQQEKCLRPQDILHFVETRFFKILMESLRKKNNKASAFRSVNTRRATQRDLDNS
GESERNRGEQEGDEEEEGPIVDAEAEEGDADASDAKRKEKQEEEVDYESEEEEVEEENND
EDVQEEGHISANGARKEQDEEVGSGPEEDSPPAAPLTQPRKSTRSREPQGAEAVERRVQA
VRESHPFIEDYQYDSEESLWCQVTVKLPLMKINFDMSSLVMSLAQSAVVYATKGITRCLL
NETTNKKNEKELVLNTEGINLPELFKYAEVLDLRRLYSNDIHAMASTYGIEAALRVIEKE
IRDVFAVYGIAVDPRHLSLVADYMCFEGVYKPLNRFGIRSNSSPLQQMTFETSFQFLKQA
TMMGSHDELRSPSACLVVGKVVRGGTGLFELKQPLR
NT seq
5151 nt
NT seq
+upstream
nt +downstream
nt
atgttgggctcaaagaacatgccctggcgaaggctgcagggcatttccttcgggatgtat
tcggccgacgaactcaagaaattaagtgtgaagtccatcacaaaccctcgttacctggac
agcctggggaacccgtcggtgaatggcctgtatgatttagctttgggccctgcggattcc
aaagaggtgtgctccacctgcgtgcaggacttcagcaactgctctggccacctgggccac
attgagcttccgctcacggtgtataatcctctcctctttgataaactctacctgctgctc
cggggctcctgtttaaactgtcacatgctgacctgcccccgggctgtgattcacctctta
gtctgccagcttcgagttctggaagtgggtgccctacaagcagtcttcgagcttgagaga
attctgaacaggtttctagaagaaaatgctgatcctactgcctttgaaattcaggaagag
ttagaacagtatacagccaaaattgtacagaacaatcagttgggatcccacggtgcacat
gtgaaaaatgtttgtgagagcaagagcaaactcattgcttacttctggaaggcacatatg
actgctaagcggtgtccccactgcaagaccgggcgatcagttgtccgaaaggagcacaac
agcaagctgacagtcacatacccagctatggtgcacaagaaggccgaccagaaggacaca
gagcccctgggaattgaggaagctcagatgggaaaacgagggtacctaacacccaccagc
gcccaagaacatcttaccgccctttggaagaatgaaggattctttctgaattaccttttc
tcgggactggaaaatgttgacatggagtctagattcaatcccagtatgttctttttggat
ttcctggtggtgccaccctcaaggtatcgccctgtcaatcggctgggggaccagatgttt
accaacggccagacggtgaacttgcaggctgtcatgaaggacatggttctgatccgaaaa
cttctggcattgatggcccaggaacaggagctgccatgtgaggtggcagcacctgccaag
gatgaggataaagactcttcggttgttctggaccgatcctttttgagtatgcttccaggc
cagtccctcacagacaaactttacaacatttggattcgtcttcagagccacgtcaatatt
gtgtttgatagtgagatggacaaattgatgatggaaaagtaccctggcattagacagatc
ctggagaagaaggatggcttattccgaaagcacatgatggggaagcgagtagactacgca
gcccgctcggtcatctgcccagacatgtacattaacaccaacgaaattggaattcccatg
gtgtttgccacaaaactgacctaccctcaaccagtcaccccctggaatgttcaggaactg
aggcaagcagtcatcaatggccccaacgtgcacccaggagcctccatggtcatcaacgag
gatggcagccgtacagccctgagtgccgtcgacctgacccagcgggaagccgtggccaag
cagctcctgacgccagccacgggggcacctaagccccaggggacaaaaattgtgtgccgg
catgtgaagaatggggacatcctcctgctgaaccgacagcccaccctgcacagaccctcc
atccaggcccaccacgcccgcatcctgcccgaggagaaagtcctgcggctccactatgcc
aactgcaaggcctataacgctgacttcgacggagacgagatgaatgcccacttcccccag
agcgaactgggccgggctgaggcctatgtcctggcctgcacagatcagcagtaccttgtt
cccaaggatggccaaccattggcaggattgatccaagatcacatggtttcgggtgcaaac
atgaccattcgaggttgctttttcactcgggagcaatatatggagctgctgtaccgagga
ctcacagacaaagtggggcgtgtgaagctctttcctcctgccatcctgaagccctttcca
ctgtggacaggaaagcaggttgtgtcaacgctgctcattaacataatcccagaggaccac
atcccactgagcttatcgggaaaggcgaagatcagcggcaaagcctgggtgcaggagtct
cctcggcctgttcccggctttaaccctgactctatgtgcgagtcccaggtgatcatcaga
gaaggggagctgctctgtggggtgctggacaaggcgcactacgggagctccgcctacggc
ctggtccactgctgctatgaaatctacggcggggagaccagcggcaaggttctcacctgc
ctggcccgcctcttcactgcctacctgcagctctacagaggcttcaccttgggcgtggaa
gacatcctggttaagccgaaggcggatgtgaagagacacagggtcatcgaagagtccacc
cactgcgggccgcgggctgtcagggctgcgttaaacctgccagaagccgcatcatgtgat
gaggtccgagggaaatggcaggatgcccatctgggcaaagaccagagggattttaacatg
attgatctgaagttcaaggaggaagtgaaccattacagcaatgaaattaacaaggcatgc
atgccatttggcctgcatagacagttcccagagaacaacttgcagatgatggtgcagtct
ggagccaaaggttcaactgtgaacaccatgcagatctcatgcctgctgggccaaatcgaa
ttagaaggtcggcgaccccccttgatggcatctggcaagtcactgccctgctttgagcct
tatgagttcacccccagggccggcggtttcgtcactggcagattcctcactggcatcaag
cctcccgagttcttcttccactgcatggccgggcgagagggtctagtggacactgctgtg
aaaaccagccgctccggctatctccaaaggtgcatcatcaagcacttggaggggctggtt
gtccagtatgatctgaccgtccgcgacagtgatggcagcgtggtacagttcttgtacggg
gaggacggcctggacatccccaagacgcagttcctgcagcccaagcagttccccttcctt
gccagcaactatgaggtgataatgaaatcgaagcatctccatgaagttttatccagagca
gatccccaaaaagctctccgtcacttccgagccatcaaaaaatggcagagcaagcattcc
aacgccctgctgagaagaggcgccttcttgaattattcacagaaaattcaggcagctgtg
aaagccttgaaccttgagggtgggaaccagaatggccgcagccttgggactcaccagatc
ttgaagctgtggggtgagttagatgagcagagtcgaaggaaataccagaagaaggcagct
ccttgtcctgaccccagtctggctgtttggcgcccagacatctactttgcctcggtgtca
gaaacatttgaaaaaaagatggatgactacagtctcgagtgggcgtctcaagcagagagg
agttacgagaaatcagagctttctcttgacaggttgaggaccctgctgcagctgaagtgg
cagcgctcgctgtgtgacccgggtgaggccgtgggcctgctggctgcccagagcattggg
gagccctccacacagatgaccctgaacaccttccactttgctggcagaggcgagatgaac
gtcaccctgggcattccgaggctgagggagattctcatggtggcgagtgccaacatcaag
acgcccatgatgagcgtgcccgtgttgaacaccaagaaagctctgaagagagtgaaaagc
ctgaagaagcaactcaccagagtgtgcttaggggaggtgttggagaaaattgatgtccag
gagtccttctgtatcggagacaaacaggacaagtttcaggtgtaccagttgaggtttcag
ttcctgccacatgcgtattaccagcaggagaagtgcctgagaccccaggacatcttgcac
ttcgtggaaacaaggttctttaaaattctgatggaatccctcagaaagaagaacaataaa
gcctcagctttcagaagcgttaacactcggagagctacccagcgggatctagacaactct
ggggagtcggagaggaatcgcggagaacaggaaggcgatgaggaagaggaggggcccatt
gtggacgctgaagctgaggagggagacgctgatgcctctgacgccaaacgcaaggagaaa
caagaagaggaggtggattacgagagcgaggaggaggaggtggaggaggagaacaacgat
gaggacgtgcaggaggaagggcacatctcggcgaacggtgctcgcaaggagcaggatgaa
gaggtgggctcaggccccgaggaggactcgcccccagctgcccccctcacccagccccgg
aagtccacccgcagcagggagccccagggggccgaggccgtggagcgccgggtgcaggcc
gtgcgcgagtcgcacccgttcatagaggactaccagtacgactccgaggagagcctgtgg
tgccaggtgactgtgaagctccctctgatgaagattaactttgacatgagctccctggta
atgtccctggcccagagtgccgtcgtctacgcgaccaagggcatcacaaggtgcctcctg
aatgaaaccaccaacaagaagaacgagaaggagcttgtcttaaacacggaaggaatcaat
ctgccggagctgttcaaatatgctgaggttctggacttgcgccgcctctactccaacgac
atccacgccatggccagcacctacggcatcgaggctgcgctgcgggtgattgagaaggag
atcagggacgtgtttgctgtgtatggcattgcggtcgacccccgccatctctcactggtc
gccgactatatgtgcttcgagggcgtttacaagccattgaatcgctttgggatccgatca
aactcctcccctctgcagcagatgacatttgaaaccagcttccagtttctgaagcaggcc
accatgatgggatcgcacgatgagctgagatccccttccgcctgcctcgtggtcgggaaa
gtcgtcaggggcgggacaggcctgttcgagctcaagcagcccctgagatag
DBGET
integrated database retrieval system
