Ursus americanus (American black bear): 123801411
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Entry
123801411 CDS
T07931
Symbol
TNR
Name
(RefSeq) tenascin-R
KO
K06252
tenascin
Organism
uar
Ursus americanus (American black bear)
Pathway
uar04151
PI3K-Akt signaling pathway
uar04510
Focal adhesion
uar04512
ECM-receptor interaction
uar04518
Integrin signaling
uar05165
Human papillomavirus infection
uar05206
MicroRNAs in cancer
Brite
KEGG Orthology (KO) [BR:
uar00001
]
09130 Environmental Information Processing
09132 Signal transduction
04151 PI3K-Akt signaling pathway
123801411 (TNR)
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
123801411 (TNR)
04518 Integrin signaling
123801411 (TNR)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
123801411 (TNR)
09160 Human Diseases
09161 Cancer: overview
05206 MicroRNAs in cancer
123801411 (TNR)
09172 Infectious disease: viral
05165 Human papillomavirus infection
123801411 (TNR)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
uar00536
]
123801411 (TNR)
Glycosaminoglycan binding proteins [BR:
uar00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
123801411 (TNR)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
fn3
Fibrinogen_C
EGF_TEN
EGF_Teneurin
EGF_Tenascin
FN3_DSCAM-DSCAML_C
Fn3_Dep-1_3rd
Fn3_PBP1
Pur_ac_phosph_N
EGF_2
Fn3_VIN3
FN3_Tor_3rd
DUF7949
SPE9_EGF_3rd
Motif
Other DBs
NCBI-GeneID:
123801411
NCBI-ProteinID:
XP_045667376
LinkDB
All DBs
Position
Unknown
AA seq
1358 aa
AA seq
DB search
MGVDGETVVLKSMLIGVNLILLGSLLKPSQCQLEVTTERVRRQAVEEEGGVANYSASGKE
RPMVFNHVYNINVPLDSLCSSGLEASAEQEVSAEDEALAEYTGQTSDHDSQVTFTHRINL
SKKACPCAGSARVLQELLSRIEMLEREVSLLRDQCASNCCPESAATGQLDYIPHCSGHGN
FSLQSCGCICNEGWFGKNCSEPYCPLGCSSRGVCVDGQCVCDSEYSGGDCSELRCPTDCS
SRGLCVDGECVCEEPYTGEDCSELRCPGDCSGKGRCANGTCFCQEGYVGDDCSQRRCPNA
CSGRGHCQEGLCFCEDGYQGPDCSAVAPPEDLRVAGISDRSIELEWDGPMAVTEYVISYQ
PTALGGLQLQRRVPGDWTGVTITELEPGLTYNISVYSVISSILSLPITAKVATHLSTPQG
LHFKTITETTVEVQWEPFSFSFDGWEISFIPKNNEGGVIAQLPSDVTSFNQTGLKPGEEY
IVNVVALKEQARSPPTSASVSTVIDGPTQILVRDVSDTVAFVEWTPPRAKVDFILLKYGL
VGGEGGKTTFRLQPPLSQYSVQALRPGSRYEVWVSAVRGTNESQSTTTQFTTEIDAPKNL
RVGSHTATSLDLEWDNSEAEVQEYKVVYSTLAGEQYHELLVPKSIGPTTRATLTDLVPGT
EYGVGISAVMNSQQSVPATMNARTELDSPRDLMVTASSETSISLIWTKASGPIDHYRITF
TPSSGIASEVTVPKDRTSYTLTDLEPGAEYIISITAERGRQQSFESTVDAFTGFRPISHL
HFSHVTSSSVNITWSDPSPPADRLILNYSPRDEEEEMTEVSLDATKRHTVLMGLQPATEY
IVNLVAVHGTVTSEPIVGSITTGIDPPKDITISNVTKDSVMVSWSPPVASFDYYRVSYRP
TQVGRLDSSVVPNTVTEFTITKLYPATEYEISLNSVRGREESERVCTLIHTAMDNPVDLT
ATNITPTEALLQWKAPVGGVENYVIILTHFAVAGETILVDGGSEGFQLAGLLPGTHYTVN
MYATSGPLTSGTVSTNFSTLLDPPANLTASEVTRQSALISWQPPRAEIENYILTYKSTDG
SRKELIVDAEDTWIRLEGLSESTDYTVLLQAAQDTSRSGLTSATFTTGGRVFPHPQDCAQ
HLMNGDTLSGVYTIFLNGELSRKLQVYCDMTTDGGGWIVFQRRQNGQTDFFRKWAEYRVG
FGNLEDEFWLGLDNIHRITSQGRYELRVDMRDGQEAAFAYYDKFSVEDGRNLYKLRLGGY
NGTAGDSLSYHQGRPFSTEDRDNDVAVTNCAMSYKGAWWYKNCHRTNLNGKYGESRHSQG
INWYHWKGHEFSIPFVEMKMRPYKHGLTAGRTRRSLQF
NT seq
4077 nt
NT seq
+upstream
nt +downstream
nt
atgggggtggacggggaaacggtggtcctgaagagcatgctcattggcgtcaacctgatc
cttctgggctccctgctcaagccctcccagtgtcagctggaggtcaccaccgaaagggtc
cggagacaggcggtggaggaggaaggaggtgtggccaactacagcgcatccggcaaagag
cggccaatggtcttcaaccacgtgtacaacattaacgtgccgctggacagcctttgctcc
tctgggctggaggcctcggccgagcaggaggtgagcgccgaagacgaggcgctggcagag
tacaccgggcagacctcggaccacgacagccaggtcaccttcacccacaggatcaacctc
tccaaaaaggcttgcccgtgtgccggctcggcccgggtgctgcaggagctgctgagccgg
attgagatgctggagagggaggtgtctctgctccgggaccagtgcgccagcaattgctgc
ccagaaagcgcggccacaggacaactggactacatccctcactgcagtggccatggcaac
tttagcctccagtcctgcggctgcatctgcaatgaaggctggttcggcaagaactgctcc
gagccctactgccccctgggctgctccagccggggcgtgtgtgtggacggccagtgtgtc
tgtgacagcgagtacagcgggggcgactgctccgagctccggtgcccgacagactgcagc
tcccgggggctctgcgtggatggagagtgtgtctgtgaagagccctacacaggcgaggac
tgcagcgagctgaggtgccccggggactgttcagggaaggggagatgcgccaatggcacc
tgcttctgccaggagggctacgtgggggacgactgcagtcagcggcggtgcccgaacgcc
tgcagcgggcgaggacactgccaggaggggctctgcttctgcgaagacggctaccagggc
cccgactgctcggcagttgcccctccagaggacttgcgagtggctggtatcagcgacagg
tccattgagctggaatgggacgggccgatggcagtgacggaatatgtgatctcttaccag
ccgacggccctggggggcctccagctccagcggcgggtacctggagattggactggtgtc
accatcacggagctggagccaggtctcacctacaacatcagcgtctactctgtcattagc
agcatcctcagccttcccatcactgccaaggtggccacccatctctccactcctcaaggg
ctacacttcaagaccatcacagagaccaccgtggaggtgcagtgggagcccttctcattc
tccttcgatgggtgggagatcagcttcattccaaagaataatgaaggaggggtgattgct
cagctccccagtgacgttacatccttcaatcagacaggactaaagcctggggaggaatac
attgtcaatgtggtggctctgaaagagcaagcccggagcccccctacctcggccagcgtc
tctactgtcattgatgggcccacacagatcctggttcgagatgtctcggacactgtggcc
ttcgtggagtggaccccacctcgagccaaagtcgatttcattctcttgaagtatggcttg
gtgggcggggaaggcgggaagaccacttttcggctacagcctcccctgagccaatactca
gtacaggccctgcggcccggctcccgctacgaggtgtgggtcagtgccgtccgcgggacc
aacgaaagccagtccacgaccacccagttcaccacagagattgacgcccccaagaatctg
cgggtgggctcacacacggcgaccagccttgacctcgagtgggacaacagtgaagcagag
gtccaggagtacaaggtcgtgtatagcaccctggcgggagagcagtaccacgagctgctg
gtccccaagagcatcggtccaaccaccagagccaccctcacagatctggtgcctggcact
gagtatggagttggaatatctgctgtcatgaactcacagcaaagtgtaccagctaccatg
aatgccaggactgaacttgacagtccccgagacctcatggtgacggcctcctcagaaacc
tccatctccctcatctggaccaaggccagtggccccattgatcattaccgaattaccttt
accccatcctctggaattgcttcagaagtcactgtgcccaaggacaggacctcgtacaca
ctgacagatctagagccaggagcagagtatatcatttcgatcacggcggagaggggtcgg
cagcaaagcttcgagtccactgtggatgccttcacaggcttccgccccatctcccatttg
cacttttctcacgtgacctcctccagcgtaaacataacctggagtgacccatcccctcca
gcagacagactcattctgaactacagccctcgggatgaagaggaagagatgacagaggtc
tccctggatgctaccaagaggcatactgtcctgatgggtctgcagccagccactgagtac
atcgtgaacctggtagctgtccatggcacggtgacctctgagcccatcgtgggctccatc
accacaggaattgatccccccaaagacattacaattagcaatgtgaccaaggactcagtt
atggtctcctggagccctcctgttgcatcttttgattactaccgagtatcctatcggcca
acacaagtgggacggctggacagctcagtggtgcccaacacagtgacagaattcaccatc
accaagctatatccagccactgaatatgaaatcagtctcaacagtgtgaggggcagagag
gagagtgagcgcgtctgtaccctcattcacacagccatggacaaccccgtggatctgact
gctaccaacatcactccaacagaagccctgctgcagtggaaggcaccagtgggtggagtg
gagaactacgtcattattctcacacactttgcagttgctggagagaccatcctggttgat
gggggcagtgagggattccagcttgccggcctgcttcctggcacccactatactgtcaat
atgtatgccaccagtgggcctctcaccagtggcaccgtcagcaccaacttctctaccctc
ctggaccctcctgcaaacctgacagccagtgaagtcaccagacaaagtgccctgatctcc
tggcagcctcccagagccgagattgaaaactacatcttaacctacaaatccactgatgga
agccgcaaggagctgattgtggatgcagaggacacgtggatccgactggagggcctgtct
gagagcacagactacacagtgctcctgcaggcagcccaggacacctcccggagcggcctc
acctctgccaccttcaccacagggggccgggtgtttcctcatcctcaagactgtgcccag
catttgatgaacggagacactctgagtggggtttacaccatcttcctcaatggggagcta
agccggaagttacaggtgtactgtgacatgaccaccgacgggggtggctggattgtgttc
cagagacggcagaatggccaaactgattttttccggaagtgggctgaataccgtgtcggc
ttcgggaacctggaggatgagttttggctggggctggacaacatacacaggatcacatcc
cagggccgctacgagctgcgcgtggacatgcgggacggacaggaggctgccttcgcctac
tacgacaagttctcggtggaggacggcagaaatctgtacaagctgcgcctagggggctac
aatggcactgcaggggactccctcagctatcatcagggacgccctttctccacagaggac
agagacaatgatgttgcggttaccaactgcgccatgtcctacaagggggcctggtggtat
aagaactgccaccggaccaacctcaacgggaaatacggagagtccaggcacagtcagggg
atcaactggtaccattggaaaggccacgagttctccatcccttttgtggagatgaagatg
cgtccctacaagcacggcctcacggcggggaggacacggcggtccctgcagttctga
DBGET
integrated database retrieval system