Ursus americanus (American black bear): 123801438
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Entry
123801438 CDS
T07931
Symbol
TPR
Name
(RefSeq) nucleoprotein TPR isoform X1
KO
K09291
nucleoprotein TPR
Organism
uar
Ursus americanus (American black bear)
Pathway
uar03013
Nucleocytoplasmic transport
uar05014
Amyotrophic lateral sclerosis
uar05200
Pathways in cancer
uar05216
Thyroid cancer
Brite
KEGG Orthology (KO) [BR:
uar00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
123801438 (TPR)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
123801438 (TPR)
09162 Cancer: specific types
05216 Thyroid cancer
123801438 (TPR)
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
123801438 (TPR)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
uar03019
]
123801438 (TPR)
Messenger RNA biogenesis [BR:
uar03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
123801438 (TPR)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_MLP1_2
Seryl_tRNA_N
YwqH-like
Imm70
Motif
Other DBs
NCBI-GeneID:
123801438
NCBI-ProteinID:
XP_045667408
LinkDB
All DBs
Position
Unknown
AA seq
2439 aa
AA seq
DB search
MPSSGSVSRSRPRGRPMASRSFDGSRRGSLRRAGAREPRSEVAEAAAQASGSSWSSPFFS
VSAPPAAGPAAPGQIDMAAVLQQVLERTELNKLPKSVQNKLEKFLADQQSEIDGLKGRHE
KFKVESEQQYFEIEKRLSHSQERLVNETRECQSLRLDLEKLNNQLKALTEKNKELEVAQD
RSVAIQSQFTRTKEELEAEKRDLVRTNERLSQELEYLTEDFKRQNEKLKESNATKGDLQL
KLDELQASDVSVKYREKRLEQEKELLHNQNTWLNTELKTKTDELLALGREKGNEILELKC
NLENKKEEVSRMEEQMNGLKTSNENLQKHVEELLTKLKEAKEQQASMEEKFHNELNAHIK
LSNLYKSAADDSEAKSNELTRAVDELHKLLKEAGEANKAIQDHLLEVEESKDQMKKEMLE
KIGKLEKELENANDLLSATKRKGAILSEEELAAMSPTAAAVAKIVKPGMKLTELYNAYVE
TQDQLLLEKLENKRINKYLDEIVKEVEAKAPILKRQREEYERAQKAVASLSVKLEQAMKE
IQRLQEDTDKANKHSSVLERDNQRMEVQIKDLSQQIRVLLMELEEARGNHVIRDEEVSSA
DISSSSEVISQHLVSYRNIEELQQQNQRLLVALRELGETREREEQETTSSKIAELQLKLE
NALTELEQLRESRQHQMQLVDSIVRQRDMYRILLSQTTGVAIPLQASSLDDISLASTPKR
SSTSQTASTPAPVPVIESAEAIEAKAALKQLQEIFENYKKEKADNEKIQNEQLEKLQDQI
TDLRSQNTKISTQLDFASKRYEMLQDNVEGYRREITSLHERNQKLTATTQKQEQIINTMT
QDLRGANEKLAVAEVRAENLKKEKEMLKLSEVRLSQQRESLLAEQRGQNLLLTNLQTIQG
ILERSETETKQRLSSQIEKLEHEISHLKKKLENEVEQRHTLTRNLDVQLLDTKRQLDTET
NLHLNTKELLKNAQKEIATLKQHLSNMEVQLASQSSQRTGKGQPTNKEDVDDLLSQLRQA
EEQVNDLKERLKTSTSNVEQYRAMVTSLEESLNKEKQVTEEVRKNIEVRLKESAEFQTQL
EKKLMEVEKEKQELQDDKRKAIESMEQQLSELKKTLNSVQNEVQEALQRASTALSNEQQA
RRDCQEQAKIAVEAQNKYERELMLHAADVEALQAAKEQVSKMASVRQHLEETTQKAESQL
LECKASWEERERMLKDEVSKCMSRCEDLEKQNRLLHDQIEKLSDKVVASVKEGVQGPLNV
SLNEEGKSQEQILEILRFIRREKEIAETRFEVAQVESLRYRQRVELLERELQELQDSLNA
EREKVQVTAKTMAQHEELMKKTETMNVVMETNKMLREEKERLEQDLQQMQAKVRKLELDI
LPLQEANAELSEKSGMLQAEKKLLEEDVKRWKARNQHLVSQQKDPDTEEYRKLLSEKEVH
TKRIQQLTEEIGRLKAEIARSNASLTNNQNLIQSLKEDLNKVRTEKETIQKDLDAKIIDI
QEKVKTITQVKKIGRRYKTQYEELKAQQDKVMETSAQSSGDHQEQHVSVQEMQELKETLN
QAETKAKSLESQIENLQKTLSEKEAEARNLQEQTVQLQSELSRLRQDLQDRTTQEEQLRQ
QITEKEEKTRKAIVAAKSKIAHLAGVKDQLTKENEELKQRNGALDQQKDELDVRMTALKS
QYEGRISRLERELREHQERHLEQRDEPQEPTNKVPEQQRQITLKTTPASGERGIASTSDP
PTANIKPTPVVSTPSKVTAAAMAGNKSTPRASIRPMVTPATVTNPTTTPTATVMPTTQVE
SQEAMQSEGPVEHVPVFGSTSGSVRSTSPNVQPSIPQPILTVQQQTQATAFVQPTQQSHP
QIEPANQELSPNIVEVVQSSPVERPSTSTAVFGTVSATPSSSLPKRTREEEEDSTIEASD
QVSDDTVEMPLPKKLKSVTPVGTEEEVMAEESTDGEVETQVYNQDSQDSIGEGVTQGDYT
PMEDSEETSQSLQIDLGPLQSDQQTTTSSQDGQGKGDDVIVIDSDDEEEDDDENDGEHED
YEEDEEDDDDDEDDTGMGDEGEDSNEGTGSADGNDGYEADDAEGGDGTDPGTETEESMGG
GESNQRAADSQNSGEGNTGTAESSFSQDISREQQPSSASERQTPRAPQSPRRPPHPLPPR
LTIHAPPQELGPPVQRIQMTRRQSVGRGLQLTPGIGGMQQHFFDDEDRTVPSTPTLVVPH
RTDGFAEAIHSPQVAGVPRFRFGPPEDMPQTSSSHSDLGQLASQGGLGMYETPLFLAHEE
ESGGRSVPTTPLQVAAPVTVFTESTTSDASEHASQSVPMVTTSTGTLSTTNETATGDDGD
EVFVEAESEGISSEAGLEIDSQQEEEPVQASDESDLPSTSQDPPSSSSVDTSSSQPKPFR
RVRLQTTLRQGVRGRQFNRQRGVSHAMGGRGGINRGNIN
NT seq
7320 nt
NT seq
+upstream
nt +downstream
nt
atgccctctagtggctcagtgtctagaagtcgcccaagaggacgacccatggcatcccgg
agctttgacgggtcccgccgcgggagtctccggcgggcaggcgcacgcgagccacggagc
gaggtggccgaggcggccgcccaggcttctgggtcctcttggtcttcgcctttcttctcg
gtgtcggctccgccggctgctggccctgcggcccccggccagatcgacatggcggcggtg
ttgcagcaagtcctggagcgcacggagctgaacaagctgcctaagtccgtccagaacaaa
cttgaaaagttccttgctgaccagcaatccgagatcgatggcctgaaggggcggcatgag
aaatttaaggtggagagtgaacaacagtattttgagatagagaagaggctgtcccacagt
caggagagacttgtgaatgaaacccgagagtgccaaagtttgaggcttgacctagagaag
ctcaacaatcaactgaaggcattaactgagaaaaataaagaacttgaagttgctcaggat
cgcagtgttgccattcagagtcagtttacaaggacgaaagaagaattagaagctgagaaa
agagacttagttagaaccaatgagagactatctcaagaacttgaatatttaacagaggat
tttaaacgtcaaaatgaaaaacttaaagaaagcaatgccacaaagggtgatctgcagtta
aaactggatgaacttcaagcttctgatgtttctgttaaatatcgagaaaaacgcttggag
caagaaaaggagttgttacataatcagaatacatggctgaatacagagttaaaaactaaa
accgatgaacttctggctcttggcagagaaaaaggaaatgagattctagagcttaaatgt
aatcttgaaaacaaaaaagaggaggtttctagaatggaagaacagatgaatggcttgaaa
acatcaaatgagaatcttcaaaaacatgtagaagagctgttgaccaaactgaaagaggcc
aaggaacagcaggccagtatggaagagaaattccacaatgaattaaatgctcatataaag
ctctctaatctatacaagagtgctgccgatgactcagaagcaaagagcaatgaactgacc
cgagcagtggatgaactacacaaacttttgaaagaagctggagaagccaataaagcaata
caggatcatcttttagaagtggaggaatctaaagaccaaatgaaaaaagaaatgcttgag
aaaatagggaaattggagaaggaattagagaacgcaaatgacctgctttctgccacaaaa
cgtaaaggagccatattatctgaagaagagcttgcagctatgtctcctactgcagcagct
gtagctaagatagtgaagcccggcatgaaattaaccgagctgtataatgcttatgtggaa
actcaggatcagttgcttttggagaaactagagaataaaagaattaataagtatctagat
gaaatagtgaaagaagttgaagccaaagcaccaattttgaaacgccagcgtgaggagtat
gaacgtgcacagaaagctgtggcaagtttatctgttaagcttgaacaagctatgaaggag
attcagcgattgcaggaggacactgataaagctaacaaacattcatctgtgcttgaaaga
gacaatcaaaggatggaagtacaaataaaagatctttcacaacagattagagtgcttttg
atggaacttgaagaagcaaggggtaatcatgtaattcgtgatgaagaagtaagctctgct
gatataagtagttcatctgaagtaatatcacagcatctagtatcttatagaaatattgaa
gaacttcaacagcaaaatcagcgtctcttagtggcccttagggaacttggggaaaccaga
gaaagagaagaacaagaaacaacttcatctaaaattgctgagcttcagctaaaacttgag
aatgccctcactgaattagaacaactccgtgagtcacgacaacatcaaatgcagcttgtt
gattccatagttcgtcagcgtgacatgtaccgtattttgttgtcgcaaacaacaggagtt
gccattcctttacaagcttcaagcttagatgatatttctcttgcatcaactccaaaacgt
tcaagtacatcccagactgcttccactcctgctccagtacctgtaattgagtcagcagag
gccatagaagccaaggctgcccttaaacagttgcaggaaatttttgagaattacaaaaaa
gaaaaggcagacaatgaaaaaatacaaaatgagcaacttgagaaacttcaggatcaaatt
acagatttacgatcacaaaacaccaaaatttctacacaactggacttcgcttctaaacgt
tacgaaatgctgcaagataatgttgaaggatatcgtcgagaaatcacatccctacatgag
agaaatcagaaactcactgcaacaactcaaaagcaggaacagatcatcaatacaatgacg
caggatttgagaggagcaaatgaaaagctagctgttgcggaagtaagagcagaaaacttg
aaaaaggaaaaggaaatgcttaaattgtcagaagtccgtctttctcagcaaagggagtct
ttattagctgaacaaagagggcaaaacttgctgctcactaatctgcaaacaattcaggga
atattagagcgatctgaaacagaaaccaaacaaagacttagtagccagatagaaaaactg
gaacatgagatatctcatctaaagaagaagctggaaaatgaggtggaacaaaggcataca
ctcactagaaatctagatgttcaacttttagatacaaagagacagctggatactgagaca
aatcttcatcttaacacaaaagaactattaaaaaatgctcaaaaggaaattgctacattg
aaacagcacctcagtaatatggaagtccagcttgcctctcagtcctcacagagaactggt
aaaggtcagcccaccaacaaagaagatgtggatgatcttctaagtcagctaaggcaggca
gaggagcaggtgaatgatttaaaggagagactcaaaacaagtactagtaatgtggaacaa
tatcgagcaatggttactagtttagaagaatctcttaacaaggaaaaacaggtgacagaa
gaagtacgtaagaatattgaagttcgtttaaaagagtcagcggaatttcagacacagttg
gaaaagaagttgatggaagttgagaaggaaaaacaggaacttcaggatgacaagagaaag
gccatagagagcatggaacaacagttatctgagttaaagaaaacactcaacagcgttcag
aacgaagtacaagaagctcttcagagagcaagcacagctttgagtaatgaacagcaagcc
agacgtgactgtcaggaacaggctaaaatagctgtggaagctcagaataagtatgagaga
gaactgatgctacatgctgctgatgttgaagctctacaagctgccaaggaacaggtttcc
aaaatggcatcagtccgtcagcatttggaagaaacaacccagaaagcagaatcacagtta
ctggagtgtaaagcatcttgggaggaaagagagagaatgttaaaggatgaagtttccaag
tgtatgtctcgctgtgaagatctggagaaacagaacagattacttcatgatcagattgaa
aaattaagtgacaaggttgtcgcctctgtgaaggaaggtgtacaaggtcccttgaatgta
tctcttaatgaagaaggaaaatctcaagaacaaattctagaaattctcagatttatacga
cgagaaaaagaaatcgctgaaaccaggtttgaggtggctcaggttgagagtctgcgttat
cgacaaagagttgagcttttagaaagagaactgcaggaactgcaggatagtctgaatgct
gaaagagagaaagtccaggtcactgcaaaaacaatggctcagcatgaagaactgatgaag
aaaactgaaacaatgaatgtagtgatggagaccaataagatgctaagagaagagaaagag
aggctggaacaggatctacagcagatgcaagcaaaggtaaggaaactggagttagatatt
ttacccttacaagaagcaaatgctgagctaagtgaaaaaagcggtatgttgcaagcagag
aagaagttactagaagaagatgtcaaacgttggaaagcacggaaccagcatctagtaagt
caacagaaagatccagatacagaagaatatcggaagctcctttctgaaaaggaagttcat
actaagcgtattcaacagttgactgaagaaattgggagacttaaagctgagattgcaaga
tcaaatgcatctttgaccaacaatcagaacttaatccagagtctaaaggaagacttaaat
aaagtaagaactgaaaaggaaaccattcaaaaggacttagatgccaaaataattgatatc
caagagaaggtcaaaactattactcaagtcaagaagattgggcgtaggtacaagactcaa
tatgaagaacttaaagcacaacaggataaggtcatggagacctcggctcagtcttctgga
gaccaccaggaacagcatgtctcagtccaggaaatgcaggagctcaaagaaaccctcaat
caagctgaaacaaaagcaaaatcactagagagtcaaatagaaaatctgcagaagacatta
tccgaaaaagaggcagaagcaagaaatctgcaggaacaaactgtgcagcttcagtctgag
ctttcccgacttcgtcaagatcttcaagatagaaccacacaagaggagcagctccgacag
cagataaccgaaaaggaagaaaaaacaagaaaggccatagtagcagcaaagtcaaagatt
gcacatctagctggtgtaaaagatcagctaactaaagaaaatgaggagcttaaacaaagg
aatggagccttagatcagcagaaagatgaattggatgttcgaatgactgctcttaaatcc
cagtatgaaggtcgaattagtcgcttggaaagagaactccgagagcatcaagagagacac
cttgagcagagagatgagcctcaagaacctactaataaggtcccagaacagcagagacag
atcacattgaaaacaactccagcttctggtgaaagaggaattgccagcacatcagaccca
ccaacagccaatatcaaaccaactcctgttgtgtctactccaagtaaagtgacagctgca
gctatggctgggaataagtcaacacccagagctagtatccgcccaatggtcacacctgca
actgttacaaatcctactactaccccaacagctacagtgatgcccactacacaagtagaa
tcacaggaagctatgcagtcagaagggcctgtggaacatgttccagtttttggaagcaca
agtggttctgtccgctctactagtcctaacgtccagccttctatccctcaacccatttta
actgttcagcaacaaacacaggctacagcttttgtgcagcccacccaacagagtcatcct
cagattgagcctgcaaatcaagagctgtcccccaacatagtagaagttgtacagagttcg
ccagttgaacggccttctacttccacagcagtatttggcactgtgtcagctaccccaagt
tcttctttgcctaaacggacacgtgaagaggaagaggatagcaccatagaagcatcagac
caagtctctgatgatacagtagaaatgcctcttccaaagaagttgaaaagtgttacccct
gtaggaactgaggaagaagttatggcagaagaaagtactgatggagaggtagaaactcaa
gtatacaaccaagattctcaagattccattggagaaggagttacccagggagattatact
ccaatggaagacagtgaagaaacctctcagtctctacaaatagaccttggaccccttcag
tcagatcagcaaacaacaacttcgtcccaagatggtcagggcaaaggagatgatgtcatt
gtgattgacagtgatgatgaagaagaggatgatgatgaaaatgatggagaacatgaggat
tatgaggaagatgaggaagatgatgacgatgatgaagatgacacagggatgggagacgag
ggtgaggacagtaacgaaggcactggtagtgcagatggcaatgatggctatgaagctgat
gatgctgagggtggtgatgggactgatccaggtacagaaacagaagaaagtatgggtgga
ggtgaaagtaatcagagagctgctgattctcaaaacagtggtgaaggtaatacaggtact
gcagagtcctctttctcccaggacatttctagagaacagcagccatcatcagcatctgaa
agacagactcctcgagcacctcagtctccaagacgccctccacaccctcttcctccacga
ctgaccattcatgctccacctcaagaattgggaccaccagttcagagaattcagatgact
cggaggcagtctgtaggacggggacttcagttgactccaggaatcggtggcatgcagcag
catttttttgatgatgaagacagaacagttccaagtactccaactcttgtggtgccgcat
cgtactgatggatttgctgaagcaattcattccccacaggttgctggtgttcctagattc
cggtttgggccacctgaagatatgccacaaacaagttcaagtcactctgatcttggccag
cttgcttctcaaggaggtttaggaatgtatgaaacacccctcttcctagctcatgaagaa
gagtcaggtggccgaagtgttcccactacccctctacaagtagcagccccagtgactgtg
tttactgagagtaccacctctgatgcttcggagcatgcctctcagtctgttccaatggtg
acaacatccactggcactttatccacaacaaatgaaacagcaacaggtgatgatggagat
gaagtatttgtggaggcagaatctgaaggtattagttcagaagcaggcctagaaattgat
agccagcaggaagaagaacctgttcaggcatctgatgagtcagatcttccttctaccagc
caggatcctccgtccagctcttctgtagatactagcagtagtcaaccaaagcctttcaga
cgagtcagacttcagacaacattgagacaaggtgtccgtggtcgtcagtttaacagacag
agaggtgtgagccatgcaatgggagggagaggaggaataaatagaggaaatattaattaa
DBGET
integrated database retrieval system