Ursus americanus (American black bear): 123801751
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Entry
123801751 CDS
T07931
Symbol
DDX39A
Name
(RefSeq) ATP-dependent RNA helicase DDX39A isoform X1
KO
K13182
ATP-dependent RNA helicase DDX39 [EC:
5.6.2.7
]
Organism
uar
Ursus americanus (American black bear)
Brite
KEGG Orthology (KO) [BR:
uar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
uar03041
]
123801751 (DDX39A)
Enzymes [BR:
uar01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
123801751 (DDX39A)
Spliceosome [BR:
uar03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
123801751 (DDX39A)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
123801751
NCBI-ProteinID:
XP_045667932
LinkDB
All DBs
Position
Unknown
AA seq
487 aa
AA seq
DB search
MSRAAVPRRRQEALPLLLGRATGNQSRTAVLAARGGERLTSTMAEQDVENELLDYEEDEE
PQAPPESTPAAPKKDVKGSYVSIHSSGFRDFLLKPELLRAIVDCGFEHPSEVQHECIPQA
ILGMDVLCQAKSGMGKTAVFVLATLQQIEPVNGQVTVLVMCHTRELAFQISKEYERFSKY
MPSVKVSVFFGGLSIKKDEEVLKKNCPHVVVGTPGRILALVRNRSLNLKNVKHFVLDECD
KMLEQLDMRRDVQEIFRLTPHEKQCMMFSATLSKEIRPVCRKFMQDVPAGQMPRSKPHLP
LPAQPMEVFVDDETKLTLHGLQQYYVKLKDSEKNRKLFDLLDVLEFNQVVIFVKSVQRCM
ALAQLLVEQNFPAIAIHRGMAQEERLSRYQQFKDFQRRILVATNLFGRGMDIERVNIVFN
YDMPEDSDTYLHRVARAGRFGTKGLAITFVSDENDAKILNDVQDRFEVNVAELPEEIDIS
TYIEQSR
NT seq
1464 nt
NT seq
+upstream
nt +downstream
nt
atgagcagagccgcagtccctcgtaggaggcaggaagcgctaccgctcttgctggggcgc
gcgaccggtaaccagagtcggacggctgtcctcgcagcacgcggaggcgaacggctaacc
agcaccatggcagaacaagatgtggaaaatgagcttctggattatgaggaagatgaagag
ccccaggctcctccagagagcactcctgctgcccccaagaaagatgtcaagggttcctat
gtttccatccacagctctggcttccgggactttctgctgaagccagagctcctgagggcc
atagtggactgtggctttgagcatccatctgaggtccagcacgagtgtattccccaagcc
atcctgggcatggacgtcctgtgccaggccaagtctgggatgggcaagacggcggtcttc
gtgctggccaccctgcagcagattgagccggtcaacggacaggtgacagtcctggtcatg
tgccatacgcgggagctcgccttccagatcagcaaagaatatgaacgcttctccaagtac
atgcccagtgtcaaggtgtctgtgttctttgggggcctttccatcaagaaggatgaagaa
gtattgaagaagaactgtccccatgtcgtagtggggacaccaggccgaatcctggcacta
gtgcgaaaccggagcctgaacctgaagaacgtgaagcacttcgtgctggacgagtgtgac
aagatgctggagcagctggacatgcggcgggacgtgcaggagatcttccgtctgacgccc
cacgagaagcagtgcatgatgttcagcgccaccctgagcaaggagatcaggcccgtctgc
aggaagttcatgcaagacgttccggcgggccagatgcccagaagtaagccccacctgccc
cttcctgcacagcccatggaggtgtttgtagatgatgagaccaagctcacgctgcacgga
ctgcagcagtactacgtcaagctcaaggacagcgagaagaaccgcaagctcttcgatctc
ctggatgtgttggagtttaaccaggtggtgatcttcgtgaagtcagtgcagcgctgcatg
gccctggcccagctcctcgtggagcagaacttccctgccatcgctatccacaggggcatg
gcccaggaggagcgtctgtcacgctatcagcaattcaaagacttccagcggcggatcctg
gtggccaccaatctgtttggccgagggatggacattgagcgagtcaacatcgtcttcaac
tatgacatgcctgaggactcggacacctacctccaccgagtggcccgtgcaggtcgcttt
gggaccaaaggcctggctatcacttttgtatctgacgagaatgatgccaaaatcctcaat
gacgttcaggacaggtttgaagtgaacgtggcagaacttcctgaagaaattgacatctcc
acatacattgagcagagccggtaa
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integrated database retrieval system
