Ursus americanus (American black bear): 123801915
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Entry
123801915 CDS
T07931
Symbol
DHX36
Name
(RefSeq) ATP-dependent DNA/RNA helicase DHX36 isoform X1
KO
K14442
ATP-dependent RNA helicase DHX36 [EC:
5.6.2.6
]
Organism
uar
Ursus americanus (American black bear)
Pathway
uar03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
uar00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
123801915 (DHX36)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
uar03019
]
123801915 (DHX36)
03012 Translation factors [BR:
uar03012
]
123801915 (DHX36)
Enzymes [BR:
uar01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
123801915 (DHX36)
Messenger RNA biogenesis [BR:
uar03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
123801915 (DHX36)
Translation factors [BR:
uar03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
123801915 (DHX36)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
DEAD
HA2_C
Helicase_C
HA2_N
AAA_22
AAA_19
nSTAND3
PhoH
AAA_14
ATPase
NPHP3_N
DUF6782
AAA_34
RsgA_GTPase
ResIII
AAA_23
NACHT
Motif
Other DBs
NCBI-GeneID:
123801915
NCBI-ProteinID:
XP_045668198
LinkDB
All DBs
Position
Unknown
AA seq
1011 aa
AA seq
DB search
MSYDYHQNWGRDGGPRSSGGGYGGSYGGGHGGGRGGNRGSGGGGGGGGGGRGGRGRHPGH
LKGREIGLWYAKKQGQKNKEAERQERAVVHMDERREEQIVQLLHSVQAKNGKDSEAQISW
FAPEDHGYGTETPTENKPNSEKKLENQEKKLISQEKRTFRIRDKYIDRDSEYLLQENEPD
VTLDQQLLEDLQKKKSDLRYIEMQHFREKLPSYGMQKELVNMIDNHQVTVISGETGCGKT
TQVTQFILDNYIERGKGSACRIVCTQPRRISAISVAERVAAERAESCGNGNSTGYQIRLQ
SRLPRKQGSILYCTTGIILQWLQSDSHLSSVSHIVLDEIHERNLQSDVLMTVIKDLLNFR
PDLKVILMSATLNAEKFSEYFGNCPMIHIPGFTFPVVEYLLEDIIEKIRYVPEQKEHRSQ
FKRGFMQGHVNRQEKEEKEAIYKERWPDYVRELRKRYSASTVDVLEMMDDEKVDLNLIAA
LIRHIVLEEEDGAILVFLPGWDNISTLHDLLMSQVMFKSDRFLIIPLHSLMPTVNQTQVF
KRTPPGVRKIVIATNIAETSITIDDVVYVIDGGKIKETHFDTQNNISTMSAEWVSKANAK
QRKGRAGRVQPGHCYHLYNGLRASLLDDYQLPEILRTPLEELCLQIKILRLGGIAYFLSR
LMDPPSDEAVSLSIKHLMELNALDKQEELTPLGVHLARLPVEPHIGKMILFGALFCCLDP
VLTIAASLSFKDPFVIPLGKEKIADARRKELAKDTKSDHLTVVNAFEGWEEARRRGFRYE
KDYCWEYFLSSNTLQMLHNMKGQFAEHLLGAGFVSSRNPKDPKSNINSDNEKIIKAVICA
GLYPKVAKIRLNLGKKRKMVKVYTKTDGLVAIHPKSVNVEQTEFHYNWLIYHLKMRTSSI
YLYDCTEVSPYCLLFFGGDISIQKDNDQETIAVDEWIVFQSPARIAHLVKELRKELDILL
QEKIESPHPVDWKDTKSRDCAVLSAIIDLIKTQEKASPRNFPPRSQDGYYS
NT seq
3036 nt
NT seq
+upstream
nt +downstream
nt
atgagctatgattaccatcagaactggggtcgggatggtgggcctcgcagctccggcggg
ggctacggaggaagctatggtgggggccatggaggaggccgtggagggaaccgaggctcc
ggaggcggcggcggcggcggaggaggtggtcgaggcggccgaggccgacatcccgggcac
ctgaaaggccgcgaaatcggcttgtggtatgcgaagaaacagggacagaagaacaaggaa
gcggagaggcaggagagagctgtagtacacatggatgaacggcgggaagaacagattgtg
cagctgctgcattcagtccaagcgaagaatggtaaagactcagaagcccagatctcctgg
tttgctcccgaagatcacggatatggtactgaaactcctactgagaacaaacccaactca
gagaagaaacttgagaaccaggaaaagaaattgataagtcaagaaaagagaacgtttaga
attagggacaaatatattgaccgagattctgaatatctcttgcaagaaaatgaaccagat
gtaaccttagaccaacaactactggaagatttacaaaagaaaaagagtgaccttcggtat
atcgaaatgcagcatttcagggaaaagctgccttcatatggaatgcaaaaggaattggta
aatatgattgataaccatcaagtaacagtaataagtggtgaaactggatgtggaaaaact
actcaagttactcagttcattttggataactacattgaaagaggaaaaggatctgcatgc
cggatagtttgtactcagccaagaagaattagtgccatttcagttgcagagagggtggct
gcagaaagggcagaatcttgtggcaatggtaacagtactggataccagattcgtctccag
agtcggttgccaaggaagcaggggtctatcttatactgtacaacaggaatcatcctgcag
tggctccagtcagactcgcatttgtccagtgttagtcatattgtgcttgatgaaatccat
gagagaaatctacagtcagatgttctaatgacggttattaaagatcttctcaattttcga
cctgacctgaaagtaatattgatgagtgcgactttaaatgctgagaaattttcagaatat
tttggtaactgtccaatgatacacatacctggttttacttttccggttgtggagtatctt
ttggaagatataattgaaaaaataagatatgttccagaacaaaaagaacacaggtcccag
tttaagagaggtttcatgcaagggcatgtaaatagacaagaaaaagaagaaaaagaagca
atctataaagaacgctggccagattatgtaagggaactgcgaaaaaggtattctgcaagt
actgtagatgttctagaaatgatggatgatgagaaagttgacctgaatttgattgctgcc
cttatccgacacattgttttggaagaagaggatggtgcaatattggtctttctaccaggc
tgggacaacatcagcactttacatgatctcttgatgtcacaagtgatgtttaaatcagac
agatttcttatcatacccctacattcactaatgcctacagttaaccagacacaggtattt
aaaagaacccctcctggtgttcggaaaatagtaattgctaccaatattgcagagactagc
attaccatagatgatgtagtttatgtgatagatggaggaaaaataaaagaaacacacttt
gacacccagaacaacatcagtacgatgtctgctgagtgggttagtaaagctaatgccaaa
caaaggaaaggccgagctggaagagttcaacctggtcattgctatcatctgtataatggt
cttagagcaagccttctggatgactatcaactgccagaaattttgagaactcctttggaa
gaactttgtttacaaataaagattttaaggctaggtggaattgcttattttctgagtagg
ttgatggatccaccatcagatgaagcggtgtcactctccataaaacacctgatggaactg
aacgctttggataaacaagaagaattgacaccccttggagttcacttagcacgattacca
gttgagccacacattgggaaaatgattctttttggagctctgttctgttgtttagatcca
gtactcaccattgctgctagtctcagcttcaaagatccctttgtcattccattgggcaaa
gaaaagattgcagatgcaagaagaaaagaattggcaaaagatactaaaagtgaccacctg
acagttgtaaatgcatttgagggctgggaagaagctaggcgacgtggtttcagatatgaa
aaagactattgctgggaatattttttgtcttcaaacacattgcagatgctgcataacatg
aaaggccagtttgctgagcatcttcttggagctggatttgtaagcagtagaaatcctaaa
gatccaaaatctaatataaattcagataatgagaaaataattaaagctgtcatctgtgct
ggtttatatcccaaagttgctaaaatccgactaaatttgggtaaaaaaagaaaaatggtc
aaagtttacacaaaaactgatggactggttgctattcatcctaaatccgttaacgtggag
caaacagaatttcactacaactggcttatctatcatctgaagatgagaacaagtagtata
tacttatatgactgcacagaagtttctccatactgtctcttattctttggaggtgatatt
tccatccagaaggataacgatcaggaaactattgctgtagatgaatggattgtctttcag
tctccagcaagaattgctcatcttgttaaggaattaagaaaggagctagatatccttctg
caagagaagatcgaaagtccccatcctgtagattggaaggacactaaatccagagactgt
gctgtactgtcagctattatagacttgatcaaaacacaggaaaaagcaagtcccaggaac
tttccgccacgatcccaggatggatattacagctga
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