Ursus americanus (American black bear): 123802488
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Entry
123802488 CDS
T07931
Symbol
PMS2
Name
(RefSeq) mismatch repair endonuclease PMS2
KO
K10858
DNA mismatch repair protein PMS2
Organism
uar
Ursus americanus (American black bear)
Pathway
uar03430
Mismatch repair
uar03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
uar00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
123802488 (PMS2)
03460 Fanconi anemia pathway
123802488 (PMS2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
uar03400
]
123802488 (PMS2)
DNA repair and recombination proteins [BR:
uar03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
MutL homologs
123802488 (PMS2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MutL_C
DNA_mis_repair
HATPase_c_3
HATPase_c
UfSP_MPN_N
Motif
Other DBs
NCBI-GeneID:
123802488
NCBI-ProteinID:
XP_045669188
LinkDB
All DBs
Position
Unknown
AA seq
903 aa
AA seq
DB search
MSEAANGRQGGGASVGAEAGTVPSPGGGSGSGSMERSEGPSTELAKAIKPIDRKSVHQIC
SGQVVLSLSTAVKELVENSVDAGATTIDLRLKDYGVDLIEVSDNGCGVEEENFEGLTLKH
HTSKIQDFADLTQVETFGFRGEALSSLCALSDVTISTCHTSAKVGTRLVFDHNGRIVQRT
PHPRPRGTTVCVQQLFYTLPVRHKEFQRNIKKEYAKMVQVLHAYCIISAGIRVSCSNQVG
QGKRQPVVCTSGSSSIKENIASVFGQKQLQSLISFAQLPPSDSVCEEYGLSPADAVQTLF
RISGFISHCAHGVGRSSADRQFFFINGRPCDPAKVSRLVNEVYHMYNRHQYPFVVLNISV
DSECVDINVTPDKRQILLQEEKLLLAVLKTSLVGMFDSDVNKLNVSQQPLLGMEGHLIQT
HSAESDKPQPEKRDSPASLRTGGEEKRAVTISRLRETFSLRHTVENRPQGPKTPAPRRVS
PRQTRHEQLPGVSDSLCARRPIPGTDSRGPREEVMRSEKGPCDLRDRGDTEQDSGHSRPS
AGPEEGFVTPGAGGHASTDCATRCPEDRFSQGSVASREKSPETDRCSADPEGHFDQEDGS
RTGRVLLQPTDVSSSNTKRFKKGGVPFSSDARQGSVKTRTSSASQVDVAVKISKKVVPLA
FSMHSLAKRIKQLQQQEQQREGKQHCRKFRAKICPGENQAAEDELRKEISKTMFAEMEII
GQFNLGFIITKLNADIFIVDQHATDEKYNFEMLQQHTALQGQRLIAPQTLNLTAVNEAVL
IENLEIFRKNGFDFIIDEGAPVTERAKLISLPTSKNWTFGPQDIDELIFMLSDSPGVMCR
PSRVRQMFASRACRKSVMIGTALNTSEMKKLVTHMGEMDHPWNCPHGRPTMRHMANLDVI
SQS
NT seq
2712 nt
NT seq
+upstream
nt +downstream
nt
atgtcggaagcagccaatgggcggcagggaggcggagcctccgtgggagcggaggcggga
actgtcccgagtcccggaggcgggtcaggttctggatccatggagcgatccgaagggccg
agcacagaacttgctaaggccatcaaacctatcgatcggaagtcagtccatcagatttgt
tctggacaagtggtcctgagtctaagtactgctgtgaaggagttggttgaaaatagtgtg
gatgccggagccactactattgatctaaggcttaaagactatggggtggatctcattgaa
gtttcagacaatggatgcggggtagaagaagaaaactttgaaggcttaactttgaaacat
cacacttctaagattcaagactttgctgacctaacccaggttgaaacttttggctttcgg
ggggaagctctgagctcactttgtgcactgagcgacgtgactatttccacctgccacacg
tccgcgaaggtcgggactcggctggtgtttgatcacaatgggagaattgtccagagaacc
ccccacccacgacccagagggacgacggtctgtgtgcagcagctgttttacacactcccc
gtgcgccataaggagtttcaaaggaatattaagaaggagtatgccaaaatggtccaggtc
ttacatgcgtactgtatcatttcggcgggcatccgggtcagttgcagcaatcaggtcggg
caaggcaaacggcagccggtggtatgcaccagtgggagctccagcataaaggaaaatatt
gcatcggtgtttgggcagaaacagctgcagagcctcatttcctttgctcagctgccccct
agtgactccgtttgtgaagagtacgggctgagccccgccgacgccgtgcaaaccctgttt
cgcatctcaggcttcatctctcactgcgctcacggtgttggaagaagttcagcagacaga
cagtttttcttcatcaatgggcggccttgtgacccagcaaaggtttccagactcgtgaac
gaggtctatcacatgtataatcgacatcagtatccatttgttgttcttaacatttctgtt
gattcagaatgtgttgatatcaatgtcactccagataaaaggcaaattttactacaagag
gagaagcttctgttggcagttttaaagacgtctttggtgggaatgtttgacagcgacgtc
aacaaactcaatgtctctcagcagccgctgttgggtatggaaggtcacttaatacaaacg
cattcggcggaatcggacaagcctcagccagaaaagcgggatagtcctgcttcgttaagg
accggaggagaagagaagagggcagtgaccatttccagactgagagagaccttttctctt
cggcacacagtggagaacaggcctcagggcccgaagacccctgccccgaggcgggtttcc
ccaagacagacgagacacgagcagcttcccggcgtttcagactccctctgcgcccggagg
cccatccctggcacagactcgcgcggcccccgggaggaggtgatgcgttcagagaagggc
ccctgtgacctcagggacagaggggacacggagcaggactcggggcacagccgcccgtca
gctggcccggaggaagggtttgtcacccctggggcaggcggtcacgccagcacggactgt
gccacacgctgccctgaagacaggttttcacaaggaagcgtggcatctcgggagaagtca
cctgagactgaccgttgctccgcggaccctgaaggccatttcgaccaagaggatggcagt
cggacaggtagagtcttgctgcagcccaccgacgtgtcctcctcaaacacaaagcgtttt
aaaaaaggtggagtccctttcagttccgacgcccgccaagggtcggtgaagactcggacc
tcgtcagcatctcaggtcgacgtggctgttaaaatcagtaagaaagtagtgcccctcgcc
ttttctatgcactctttagctaaacgaataaagcagttgcagcagcaagaacagcagaga
gaaggcaaacagcactgtaggaagttcagggccaagatttgccccggagaaaaccaggcc
gcagaggatgaactaagaaaggagataagtaaaacgatgttcgcggaaatggagatcatt
ggtcagtttaacttgggatttataatcaccaaactgaacgcagacatcttcatagtggac
cagcacgctacggacgagaagtacaacttcgagatgctgcagcagcacactgccctccag
ggccagaggctcatagcaccccagactctcaacttaacggctgtcaatgaagctgttcta
atagaaaacctggaaatattcagaaagaacggctttgattttattatcgacgaaggggct
ccagtcaccgaaagagctaaattgatttccttgccaactagtaaaaactggaccttcgga
ccccaggacatcgacgaactgatctttatgctgagcgacagtcctggggttatgtgccgg
ccttcccgagtcaggcagatgtttgcctccagagcctgtcggaagtctgtgatgattgga
actgctcttaacacgagcgagatgaagaagctcgtcacccacatgggcgagatggaccat
ccctggaactgtccccacggaaggccgaccatgcgacacatggccaacctggatgtcatt
tctcaaagctga
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