KEGG   Ursus americanus (American black bear): 123802614
Entry
123802614         CDS       T07931                                 
Symbol
SDC1
Name
(RefSeq) syndecan-1
  KO
K06257  syndecan 1
Organism
uar  Ursus americanus (American black bear)
Pathway
uar04512  ECM-receptor interaction
uar04514  Cell adhesion molecule (CAM) interaction
uar04820  Cytoskeleton in muscle cells
uar05144  Malaria
uar05205  Proteoglycans in cancer
uar05418  Fluid shear stress and atherosclerosis
Brite
KEGG Orthology (KO) [BR:uar00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    123802614 (SDC1)
   04514 Cell adhesion molecule (CAM) interaction
    123802614 (SDC1)
 09140 Cellular Processes
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    123802614 (SDC1)
 09160 Human Diseases
  09161 Cancer: overview
   05205 Proteoglycans in cancer
    123802614 (SDC1)
  09174 Infectious disease: parasitic
   05144 Malaria
    123802614 (SDC1)
  09166 Cardiovascular disease
   05418 Fluid shear stress and atherosclerosis
    123802614 (SDC1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:uar04131]
    123802614 (SDC1)
  09183 Protein families: signaling and cellular processes
   04090 CD molecules [BR:uar04090]
    123802614 (SDC1)
   00535 Proteoglycans [BR:uar00535]
    123802614 (SDC1)
Membrane trafficking [BR:uar04131]
 Exocytosis
  Calcium ion-dependent exocytosis
   Acrosomal exocytosis proteins
    123802614 (SDC1)
CD molecules [BR:uar04090]
 Proteins
  123802614 (SDC1)
Proteoglycans [BR:uar00535]
 Cell surface proteoglycans
  Syndecan family (transmembrane HSPG)
   123802614 (SDC1)
SSDB
Motif
Pfam: Syndecan Romo1
Other DBs
NCBI-GeneID: 123802614
NCBI-ProteinID: XP_045669413
UniProt: A0A452QVQ1
LinkDB
Position
Unknown
AA seq 301 aa
MRRAALWLWLCALALRLQPALPQIVATNVPPEDQDGSGDDSDNFSGSGAGALQDIALSQQ
TPSTWKDMALLTAVPTAPEPSGAGNTAASTSVLPTGEAPEEGEAVLVAEVEPGFTDREKE
TTHPPSETTPHPTTHRASTARATTAQGPATSHPHRDMQPSAPVGPGQLDPHTPSVEDGGP
SATERATEDGISTQLPAGEGSGEQDFTFDLSGENMAGTAVEPDQRNQPPDHEASQGLLDR
KEVLGGVIAGGLVGLIFAVCLVGFMLYRMKKKDEGSYSLEEPKQANGGAYQKPSKQEEFY
A
NT seq 906 nt   +upstreamnt  +downstreamnt
atgaggcgcgcggcgctctggctctggctctgcgcgctggcgctgcgcctgcagccggct
ctcccgcaaattgtggccacgaatgtgccccccgaagatcaggacggctctggggatgac
tctgacaacttctctggctccggtgcaggtgctctgcaagacatcgccctgtcacagcag
accccgtccacctggaaggacatggcacttctgacggctgtgcccacggctccagagccc
agcggcgcggggaacaccgccgcctccacctccgtcttgcccacgggagaggcgcctgag
gagggagaggcggtgctcgtggctgaggtggagcctggcttcaccgaccgggagaaggag
accacccacccgcccagtgagaccacgccgcacccaaccactcaccgggcatcaacagca
agagccaccacggcccaggggcctgccacctcccacccccacagggacatgcagccctcg
gctccggtgggacctggccagctcgaccctcacactcccagtgtggaggacggaggtcct
tctgccaccgagagagccacggaggatggaatctccactcagctcccggccggagagggc
tctggggagcaggacttcacctttgacctgtctggggagaacatggccgggacggctgtg
gagcctgaccagcggaatcaacccccagaccatgaggcctcacagggcctgctggacagg
aaggaagtgctgggaggggtcatcgctggaggcctcgtggggctcatctttgccgtgtgc
ctggtgggtttcatgctgtatcggatgaagaagaaggacgagggcagctactccttggag
gagccgaaacaagccaacggcggagcctaccagaagcccagcaagcaggaggagttctac
gcctga

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