Ursus americanus (American black bear): 123803228
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Entry
123803228 CDS
T07931
Symbol
HDAC5
Name
(RefSeq) histone deacetylase 5 isoform X1
KO
K11406
histone deacetylase 4/5 [EC:
3.5.1.98
]
Organism
uar
Ursus americanus (American black bear)
Pathway
uar04371
Apelin signaling pathway
uar04613
Neutrophil extracellular trap formation
uar05034
Alcoholism
uar05203
Viral carcinogenesis
uar05206
MicroRNAs in cancer
Brite
KEGG Orthology (KO) [BR:
uar00001
]
09130 Environmental Information Processing
09132 Signal transduction
04371 Apelin signaling pathway
123803228 (HDAC5)
09150 Organismal Systems
09151 Immune system
04613 Neutrophil extracellular trap formation
123803228 (HDAC5)
09160 Human Diseases
09161 Cancer: overview
05206 MicroRNAs in cancer
123803228 (HDAC5)
05203 Viral carcinogenesis
123803228 (HDAC5)
09165 Substance dependence
05034 Alcoholism
123803228 (HDAC5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
uar03036
]
123803228 (HDAC5)
Enzymes [BR:
uar01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
123803228 (HDAC5)
Chromosome and associated proteins [BR:
uar03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class II HDACs
123803228 (HDAC5)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Hist_deacetyl
HDAC4_Gln
TFIIA
Motif
Other DBs
NCBI-GeneID:
123803228
NCBI-ProteinID:
XP_045670500
LinkDB
All DBs
Position
Unknown
AA seq
1136 aa
AA seq
DB search
MLLVPKAQGLVEMLQTIYETESCFSADGMSGREPSLEILPRTPLHGIPVAVEVKPVLPGA
MPSSMGGGGGGSPGPAELRGALAGPVDPALREQQLQQELLALKQQQQLQKQLLFAEFQKQ
HDHLTRQHEVQLQKHLKQQQEMLAAKRQQELEQQRQREQQRQEELEKQRLEQQLLILRNK
EKSKESAIASTEVKLRLQEFLLSKSKEPTPGGLNHSLPQHPKCWGAHHASLDQSSPPQSG
PPGTPPSYKLPLLGPYDSRDDFPLRKTASEPNLKVRSRLKQKVAERRSSPLLRRKDGTVI
STFKKRAVEITGAGPGVSSVCNSAPGSGPSSPNSSHSTIAENGFTGSVPNIPTEMLPQHR
ALPLDSSPNQFSLYTSPSLPNISLGLQATVTVTNSHLTASPKLSTQQEAERQALQSLRQG
GALTGKFMSTSSIPGCLLGVALEGDTSPHGHASLLQHVLLLEQARQQSALIAVPLHGQSP
LVTGERVATSMRTVGKLPRHRPLSRTQSSPLPQSPQALQQLVMQQQHQQFLEKQKQQQLQ
LGKILTKTGELSRQPPTHPEETEEELTEQQEALLGEGALTIPREGSTESESTQEDLEEEE
EEEEEEEEEEEEEDCIQVKDEEGESGTEEGPDLDESSAGYKKVFSDAQQLQPLQVYQAPL
SLATVPHQALGRTQSSPAAPGGMKSPPDQPAKHLFTTGVVYDTFMLKHQCTCGNTHVHPE
HAGRIQSIWSRLQETGLLSKCERIRGRKATLDEIQTVHSEYHTLLYGTSPLNRQKLDSKK
LLGPISQKMYAMLPCGGIGVDSDTVWNEMHSSSAVRMAVGCLVELAFKVASGELKNGFAI
IRPPGHHAEESTAMGFCFFNSVAITTKLLQQKLNVGKVLIVDWDIHHGNGTQQAFYNDPS
VLYISLHRYDNGNFFPGSGAPEEVGGGPGMGYNVNVAWTGGVDPPIGDVEYLTAFRTVVM
PIAHEFSPDVVLVSAGFDAVEGHLSPLGGYSVTARCFGHLTRQLMTLAGGRVVLALEGGH
DLTAICDASEACVSALLSVELQPLDEAVLQQKPNINAVATLEKVIEIQSKHWSCVQRFAA
GLGRSLREAQAGETEEAETVSAMALLSVGAEQAQAAAAREHSPRPTEEPMEQEPAL
NT seq
3411 nt
NT seq
+upstream
nt +downstream
nt
atgctgctggtgcccaaggctcaggggctcgtggagatgctgcagaccatctatgagacg
gaatcctgtttctcagcagatgggatgtcaggccgggaaccatccttggaaattctgcct
cggacccctctacacggcatccctgtggcagtggaggtgaagccggtgctgcccggagcc
atgcccagctccatggggggtgggggaggaggcagccccggccccgcggagctgcggggg
gctctggcgggccccgtggaccccgcactgagggagcagcagctgcagcaggagctcctg
gcgctcaagcagcagcagcagctgcagaagcagctcctgttcgctgagttccagaaacag
cacgaccacctgacacggcagcatgaggtccagctgcagaagcacctcaagcagcagcag
gagatgctggcggccaagaggcagcaggagctggagcagcagcggcagcgggagcagcag
cggcaggaagagctggagaagcagcggctggagcagcagctgctcatcctgcgaaacaag
gagaagagcaaagagagtgccatcgccagcactgaggtgaagctgcggctccaggaattc
cttctgtcgaagtcaaaggagcccacgccaggcggcctcaaccattccctcccgcagcat
cccaaatgctggggagcccaccatgcttctttggaccagagttcccctccccagagtggc
ccccctgggacgcctccctcctacaaactgcctttgcttgggccctatgacagccgcgat
gacttccccctccgcaaaacagcctctgaacccaacttgaaagtgcgttcgaggctaaag
cagaaggtggctgagcggagaagtagtcccctcctgcgtcgcaaggatgggacagtcatt
agcacctttaagaagagagcggttgagatcaccggtgccgggcctggggtgtcgtccgtg
tgtaacagcgcgccaggctccggccccagctctcccaacagctcccacagcaccattgct
gagaatggctttactggctcagtccccaacatcccgaccgagatgctcccccagcaccgg
gccctccctctggacagctcccccaaccagttcagcctctacacgtctccctctctgccc
aacatctccctagggctgcaggccacagtcactgtcaccaactcacacctcaccgcctcc
ccgaagctgtcaacgcagcaggaggccgagaggcaggccctccagtccctgcggcagggt
ggcgcactgacgggcaagttcatgagcacatcctccatccccggctgcctgctgggcgtg
gcgctggagggcgacaccagcccccacgggcacgcctccctgttgcagcacgtgctgctg
ctggagcaggctcggcagcagagcgccctcatcgctgtgccactccatgggcagtccccg
ctggtgacaggtgaacgtgtggccaccagcatgcggacagtgggcaagctcccgcggcac
cggcccctgagccgcactcagtcctccccgctgccccagagcccccaggccctgcagcag
ctcgtcatgcagcagcagcaccagcagttcctggagaagcagaagcaacagcagctgcag
ctgggcaagatcctcaccaagactggggagctgtcacggcagccccccacccaccctgag
gagacagaggaggagctgactgagcagcaggaggccttgcttggggagggagccctgacc
atcccccgagaaggctccacggagagtgagagcacgcaggaagacctggaggaggaggag
gaggaagaggaggaggaggaggaggaagaggaggaggaggactgcatccaggtcaaggat
gaggagggcgagagtggcactgaggaggggcccgacttggacgagtccagtgctggttac
aaaaaggtgttctccgatgcccagcagctgcagccacttcaggtgtaccaggcacccctc
agcctggccactgtgccccaccaggccctgggccgcacccagtcctcacctgctgcccct
gggggcatgaaaagccctccagaccagcccgccaagcacctcttcaccacaggtgtggtg
tacgacacgttcatgctgaagcaccagtgcacgtgtgggaacacacacgtgcaccccgag
cacgccggccgcatccagagcatctggtcccggctgcaggagacaggcctgctgagcaag
tgtgagcggatccggggtcgcaaagccacgttggacgagatccagacagtgcactccgaa
taccacactctgctctatgggaccagccccctcaaccgacagaagctagacagcaagaag
ctgctcggccccatcagccagaagatgtatgccatgctgccttgtgggggcattggggtg
gacagtgacactgtgtggaatgagatgcactcctccagtgccgtgcgcatggcagtgggc
tgcctggtggagctggcttttaaggtggcctcaggagagctcaagaacggatttgccatc
atccggccgccgggacaccatgcggaggagtccacagccatgggattctgcttcttcaac
tctgtagccatcacaaccaaactcctgcagcagaagctgaacgtgggcaaggttctcatc
gtggactgggacattcaccatggcaatggcacccagcaagcgttttacaatgacccctct
gtgctctacatctccctgcatcgctatgacaacgggaacttctttccaggctcgggggct
cctgaagaggttggcggagggccgggcatggggtacaatgtgaacgtggcatggacggga
ggtgtggacccccccatcggagacgtggagtacctaacggccttcaggacagtggtgatg
cccattgcccatgagttctcacctgacgtggtcctggtctctgccgggttcgatgctgtt
gagggacacctgtctccactgggtggctactctgtcaccgccagatgctttggccacttg
accaggcagctgatgacgctggcagggggccgggtggtgctggccctggagggaggccat
gacttgaccgccatctgtgatgcctctgaggcctgtgtctcggctctgctcagcgtggag
ctgcagcccttggacgaggcagtcttgcaacaaaagcccaacatcaacgcagtggccacg
ctagagaaagtcatcgagatccagagcaaacactggagctgcgtccagaggttcgccgct
ggtcttggccgttccctgcgggaggcccaggcgggtgagacagaggaggcggagactgtg
agcgccatggccttgctgtcggtgggggccgagcaggcccaggctgctgcagcccgggag
cacagccccaggccgacagaggagcccatggaacaggagcctgccctgtga
DBGET
integrated database retrieval system
