Ursus americanus (American black bear): 123803370
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Entry
123803370 CDS
T07931
Symbol
HBS1L
Name
(RefSeq) HBS1-like protein isoform X1
KO
K14416
elongation factor 1 alpha-like protein
Organism
uar
Ursus americanus (American black bear)
Pathway
uar03015
mRNA surveillance pathway
uar05134
Legionellosis
Brite
KEGG Orthology (KO) [BR:
uar00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
123803370 (HBS1L)
09160 Human Diseases
09171 Infectious disease: bacterial
05134 Legionellosis
123803370 (HBS1L)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
uar03019
]
123803370 (HBS1L)
Messenger RNA biogenesis [BR:
uar03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
123803370 (HBS1L)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
HBS1_N
GTP_EFTU_D2
MMR_HSR1
AAA_22
AAA_29
DO-GTPase2
Motif
Other DBs
NCBI-GeneID:
123803370
NCBI-ProteinID:
XP_045670727
UniProt:
A0A452QAG9
LinkDB
All DBs
Position
Unknown
AA seq
685 aa
AA seq
DB search
MARHRNVRGYNYDEDFEDDDLYGQSVEDDYCISPSTAAQFIYSRRDKPSLVEPVEEYDYE
DLKESSSSLLNHQLSGIDQARLYSCLDHMREVLGDAVPDDTLIEAVLKNKFDVQKALAVV
LEQDKMQNWKVKSEGAISTGKIAKGKSVDSQSSRSESEIVPKVAKMTVSGKKQTMGFEVP
GVTEENGHSFHTPQKGHLSEGTSIAASDVPDTVSKSLLPSHTIQTSEEQSSTPTPVKKSG
KLRQQIDVKAELEKRQGGKQLLNLVVIGHVDAGKSTLMGHMLYLLGNVNKRTMHKYEQES
KKAGKASFAYAWVLDETGEERERGVTMDVGMTKFETTTKVITLMDAPGHKDFIPNMITGA
AQADVAVLVVDASRGEFEAGFETGGQTREHGLLVRSLGVTQLAVAVNKMDQVNWQQERFQ
EITGKLGHFLKQAGFKESDVAFIPTSGLSGENLITRSQSSELTKWYKGLCLLEQIDSFKP
PQRSIDKPFRLCVSDVFKDQGSGFCVTGKIEAGYIQTGDRLLAMPPNETCTAKGITLHDE
PVDWAAAGDHVSLTLVGMDIIKINVGCVFCGPKEPIKACTRFRARILIFNIEIPITKGFP
VLLHYQTVSEPAVIKRLISVLNKSTGEVTKKKPKLLTRGQNALVELQTQRPVALELYKDF
KELGRFMLRYGGATIAAGVVTEIKE
NT seq
2058 nt
NT seq
+upstream
nt +downstream
nt
atggcccggcatcggaatgtccgaggctataactacgatgaagattttgaagatgatgat
ctctatggccagtctgtggaggatgattactgtatttcgccatcaacagctgctcagttc
atttactcgcggcgcgacaagccttcacttgttgagcctgtagaagagtacgattatgaa
gatctgaaagagtcctccagttctcttctgaaccatcagctgagtggaattgatcaagct
cgtctttattcatgccttgatcacatgagagaggtacttggagatgctgtgccagatgac
actttgattgaagcagttctgaagaacaagtttgatgtgcagaaggctttggcagtggtt
ctggaacaagataagatgcagaattggaaggtcaagagtgagggagcaatatctacaggg
aagatagcaaaaggaaaatcagtagactcccagtcgtctcgaagtgaatctgaaattgtg
ccaaaagttgctaaaatgactgtgtctggaaagaagcaaactatgggattcgaagtgcct
ggagtaaccgaagaaaatggtcatagtttccacacacctcaaaaaggacatcttagtgaa
ggaaccagcattgctgcttctgatgttcctgacactgtttctaaatcacttcttccatcc
cacaccattcaaacatcagaagagcagagttcaacaccaacgccggtgaaaaagtctggc
aagctgaggcagcaaatagatgtcaaagcggaactggagaagcggcaaggagggaagcag
ctcctcaacttggtggtcatcggtcatgttgatgctgggaaaagtactctgatgggccat
atgctttatcttctgggtaatgtaaacaaaagaactatgcataagtatgaacaagagtct
aaaaaggctggcaaagcttcgtttgcatatgcatgggtcttggatgagactggcgaagaa
agggaaaggggagtaacaatggatgttggtatgacaaagtttgagaccacaaccaaagtt
attacattaatggatgctccaggccataaggatttcattccaaatatgattacaggagca
gcccaggcagatgtagccgttttagttgtagacgccagcaggggagagtttgaagctgga
tttgagactgggggacagacacgagaacatggcctcttggttcgttctcttggagtcaca
cagcttgctgttgcggtcaataagatggatcaggttaattggcaacaagaaaggtttcaa
gagattaccggaaagcttgggcactttcttaagcaagcaggttttaaggaaagtgatgta
gcttttatccctacaagtggtctcagcggtgaaaatctaatcacaagatctcaatcaagt
gaactcacaaaatggtataaaggactgtgtttattagaacaaattgactccttcaagcct
cctcagagatctattgataagccttttagattatgtgtgtctgatgttttcaaagatcaa
ggatctggattttgtgtaactggtaaaattgaagctggttatatccagactggtgaccga
ctactagcaatgcctcctaatgaaacttgtactgcaaaaggaatcactctgcacgatgaa
cccgtcgactgggctgcagcaggtgatcatgttagtcttacgttggtggggatggatatc
atcaagatcaatgttggctgcgtattttgtggccccaaagaacccattaaagcttgcact
cgtttcagagctcgaatcctcatctttaatattgaaattccaatcactaaaggatttcct
gtgctgttacactaccagactgtcagtgaacctgccgttattaaacgactgattagcgtc
ttaaacaagagcaccggtgaagtcacaaagaagaagccaaaactgctgactagaggccag
aacgccctggtggagctgcagactcaacggccggtcgccctggagctgtacaaagacttc
aaagagctgggccggttcatgctgcgctatggcggtgccacgatcgccgcgggcgtggtc
accgagataaaggaatga
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